Container Building​

• Added max size validation for container layer location by @pditommaso in #1006

General​

• Updated wave.build.public-repo reference language by @christopher-hakkaart in #1008
• Replaced local DurationUtils with shared lib-util-time by @pditommaso in #1010

Dependencies​

• Updated actions/checkout action to v4.3.1 by @seqeralabs-renovate[bot] in #1013
• Updated actions/setup-java action to v4.8.0 by @seqeralabs-renovate[bot] in #1014
• Updated actions/setup-node action to v4.4.0 by @seqeralabs-renovate[bot] in #1015
• Updated actions/upload-artifact action to v4.6.2 by @seqeralabs-renovate[bot] in #1016
• Updated aws-actions/amazon-ecr-login action to v1.7.1 by @seqeralabs-renovate[bot] in #1017
• Updated aws-actions/configure-aws-credentials action to v1.7.0 by @seqeralabs-renovate[bot] in #1018
• Updated dependency node to v20.20.2 by @seqeralabs-renovate[bot] in #1019
• Updated docker/login-action action to v3.7.0 by @seqeralabs-renovate[bot] in #1020
• Updated docker/setup-buildx-action action to v3.12.0 by @seqeralabs-renovate[bot] in #1021
• Upgraded third-party dependencies to latest stable versions by @cristianrcv in #998
• Pinned dependencies by @seqeralabs-renovate[bot] in #1012

Bug fixes​

Container Building​

• Fixed Conda builds for packages requiring __cuda virtual package by @pditommaso in #1027

Singularity​

• Fixed build error with --build-template conda/micromamba:v2 for Singularity by @munishchouhan in #972

Full changelog: https://github.com/seqeralabs/wave/compare/v1.33.1...v1.33.2

Language features​

• Added typed workflows by @bentsherman in #6881

Modules​

• Added module create subcommand by @pditommaso in #6992
• Added module spec command by @jorgee in #6859
• Added module validate subcommand by @pditommaso in #6993
• Replaced custom ModuleRegistryClient with npr-client API by @pditommaso in #7012

General​

• Added compute env ID and provider support to Seqera executor by @pditommaso in #6906
• Added resourceAllocation field to trace record by @pditommaso in #6973
• Replaced Auth0 with Platform OIDC PKCE for auth login by @pditommaso in #6953
• Used inline metadata from trace create response by @pditommaso in #6976

Bug fixes​

General​

• Fixed NPE in GitLab/Gitea getGitCredentials when password is null but token is set by @robsyme in #7007
• Fixed missing version for junit-platform-launcher dependency by @pditommaso in #7011

Dependencies​

• Bumped nf-amazon@3.8.2
• Bumped nf-seqera@0.17.0
• Bumped nf-tower@1.24.0

Full changelog: https://github.com/nextflow-io/nextflow/releases/tag/v26.03.2-edge

Studios​

• Updated Studios micromamba to conda/micromamba:v2 and Wave to 1.33.0.

Compute environments​

• Added private VNet and subnet support for Azure Batch compute environments.
• Added separate Azure managed identities for head and compute jobs.
• Improved compute environment metering system with observability and retry logic.

Datasets​

• Added frontend implementation for dataset import from URL.
• Added preview support for linked datasets.

Data Explorer​

• Added Fusion symlink support in Data Explorer.
• Increased maximum data-link name length to 512 characters.

Bug fixes​

Compute environments​

• Fixed projectId on WIF LoggingOptions for log retrieval.
• Fixed WIF log retrieval to resolve project number to project name.
• Fixed WIF organization and workspace context propagation for log retrieval and data links.

Pipelines​

• Fixed parallel requests to pipeline info in launch form.

Datasets​

• Fixed dataset name field to apply input normalization.
• Fixed column order preservation in dataset preview for TSV files.

Access control​

• Fixed handling of absent Auth0 organization context.

Studios​

• Added Wave nameStrategy workspace setting for Studios.

Compute environments​

• Added Azure service principal credentials support.
• Added Workload Identity Federation support for Google Batch compute environments.
• Added Entra credentials for Azure Batch Forge and Fusion v2.
• Added resource labels as metadata on Azure Batch jobs.
• Added support for multiple machine types in Google Batch compute environments.

Pipelines​

• Added Nextflow CLI as a static OIDC client.

Datasets​

• Added URL redirection logic to dataset file endpoint.

Data Explorer​

• Added extensible view mode selection for JSON files.
• Added open in new tab support for all files.

Monitoring​

• Updated database model to include target resource name.

General​

• Applied new email design to all email templates.
• Updated copy in delete workspace confirmation modal.
• Removed unused Containers page.
• Upgraded to Angular 21.

Bug fixes​

Studios​

• Fixed git config file validation when creating a Studio.

Compute environments​

• Fixed errors not propagated when a job is terminated asynchronously.
• Removed deprecated seqera.executor.predictionModel configuration.
• Removed terminateAsync default implementation.

Access control​

• Fixed Auth0 OAuth2 flow to handle ResponseClosedException.

Monitoring​

• Fixed credential audit events to include metadata.
• Fixed task logging to use populated taskId instead of empty id.

General​

• Fixed page-header actions, documentation links, and spacing.
• Fixed forbidden page icon size.

Container building​

• Refactored build vs cache IAM permission structure by @gwright99 in #999

UI/UX​

• Updated list to cards on tutorials page by @christopher-hakkaart in #993

General​

• Updated index page by @christopher-hakkaart in #1004
• Updated copyright to 2026 by @munishchouhan in #1003
• Updated token cache duration and clarified public repository documentation by @munishchouhan in #1007

Dependencies​

• Migrated dependencies to Gradle version catalog (libs.versions.toml) by @cristianrcv in #996
• Bumped Netty to 4.2.10.Final and Micronaut to 4.10.10 by @pditommaso in #1001

Full changelog: https://github.com/seqeralabs/wave/compare/v1.33.0...v1.33.1

Language features​

• Hardened ProcessEntryHandler types and added test for dot-notation conflicts by @pditommaso in #6966
• Added print workflow outputs on run completion by @bentsherman in #6875
• Used destructuring syntax for process record/tuple inputs by @pditommaso in #6912

General​

• Added -project-dir option to lint command by @bentsherman in #6728
• Added platform-related metadata to WorkflowRun lineage record by @jorgee in #6545
• Added request timeout to tower client by @jorgee in #6950
• Added support for Java 26 by @pditommaso in #6969
• Improved module command: enabled logging for module run, fixed info URL and search output by @pditommaso in #6961
• Skipped launch metadata fetch for CLI-submitted runs by @pditommaso in #6975
• Used -d flag for bkill in LSF executor by @cgoina in #6784

Bug fixes​

Language features​

• Fixed handling of empty publishedValues in PublishOp.onComplete for optional outputs by @jorgee in #6979
• Fixed incorrect evaluation of secret process directive by @bentsherman in #6934
• Fixed params block in included module by @bentsherman in #6940

S3​

• Fixed download of empty files in old MinIO-based S3 transfers by @jorgee in #6944

AWS Batch​

• Fixed AWS Batch machine type trace for new instance families by @FloWuenne in #6952

Plugins​

• Fixed jackson-databind dependency in nf-amazon by @pditommaso in #6941

Dependencies​

• Fixed netty and jackson vulnerabilities by @jorgee in #6955
• Fixed security vulnerabilities by @jorgee in #6938

General​

• Fixed AgentLogObserver printing [SUCCESS] on failed runs by @pditommaso in #6962
• Fixed LogsCheckpoint thread interrupt race condition by @pditommaso in #6939
• Fixed module run CLI params cast to declared meta.yml input types by @jorgee in #6968
• Fixed typo in TowerRetryPolicy: maxAttemps → maxAttempts by @robsyme in #6949

Full changelog: https://github.com/nextflow-io/nextflow/releases/tag/v26.03.1-edge

Studios​

• Added IGV viewer for genomic data visualization.
• Added clipboard permissions to Studios iframe.
• Added support for previewing multitrack IGV JSON files.
• Improved Studios capabilities version check to normalize to major.minor granularity.

Compute environments​

• Added KMS encryption policy to AWS Cloud compute environments to support mounting KMS buckets in Studios.
• Added boot disk image selection for Google Batch compute environments.
• Added machine type selection for Google Batch compute environments.

Datasets​

• Added dataset link foundations.
• Added validate and link endpoints for dataset linking.

Pipelines​

• Improved pipeline launch form to scroll to first invalid control and highlight invalid parameters step.

General​

• Updated tabs component styles.
• Unified Seqera logos in compute environment and credential forms.

Bug fixes​

Compute environments​

• Fixed Google Batch secrets support.

Data Explorer​

• Fixed horizontal scrolling in Data Explorer file preview modal.

Access control​

• Fixed and clarified refresh token properties.
• Fixed permission required interceptor.
• Fixed JWTAuthRequired interceptor binding to prevent silent bypass.

General​

• Fixed nginx absolute redirects.

Language features​

• Added module system by @pditommaso in #6650
• Added multi-arch support to arch process directive by @pditommaso in #6897
• Added record types by @bentsherman in #6679
• Propagated errors from workflow outputs by @bentsherman in #6876

Configuration​

• Added provider option to Seqera executor config by @pditommaso in #6908

Google Batch​

• Added support for GCP Ops Agent by @ejseqera in #6608
• Added support for latest-generation Google Cloud machine families by @sosoihd in #6841

Fusion​

• Defaulted Fusion to v2.6 for Seqera executor by @pditommaso in #6933

General​

• Added NVMe disk allocation and diskMountPath support by @pditommaso in #6879
• Added logStreamId to Tower task record by @pditommaso in #6877
• Excluded container from task trace when containers are not enabled by @bentsherman in #6824
• Increased tasks.cloudZone width from 15 to 25 by @ramonamela in #6907

Bug fixes​

Language features​

• Fixed formatting bug with map key expression by @bentsherman in #6893
• Fixed path traversal, resource leak, and race condition in module system by @pditommaso in #6929
• Fixed remote modules when base dir is not the current working directory by @jorgee in #6932
• Fixed stageAs method signature in typed process by @bentsherman in #6915

Configuration​

• Fixed type detection of CLI params in v2 config parser by @bentsherman in #6765

Google Batch​

• Fixed Google Batch exit code when spot claim is successfully retried by @jorgee in #6926

Kubernetes​

• Fixed K8s token refresh by caching K8sClient at executor level by @pditommaso in #6925

Plugins​

• Fixed HttpPluginRepository empty plugin list check by @pditommaso in #6650

General​

• Fixed TraceFileObserver NPE when trace file already exists by @robsyme in #6891

Full changelog: https://github.com/nextflow-io/nextflow/releases/tag/v26.03.0-edge

Compute environments​

• Added human-readable messages for Google Batch exit codes.
• Added network tags support for Google Batch compute environments.

Data Explorer​

• Updated S3-compatible storage label in Data Explorer filter.

Access control​

• Moved edit button to organization details card.
• Improved welcome email UI.
• Updated authentication error page background.

General​

• Added navigation side-nav component for in-page navigation.
• Added expandable-text component to design system.

Bug fixes​

Studios​

• Fixed Studios expiry check to include stopping Studios.

Pipelines​

• Fixed tower.launch.params.maxSize to be passed to the frontend and used in validators.
• Fixed database migration by removing DEFAULT constraint on LONGTEXT column in tw_task_data_ext.

General​

• Fixed vertical alignment of checkboxes in table select column.
• Fixed table checkbox positioning.

Container building​

• Added multi-platform container builds for amd64 and arm64 by @pditommaso in #985

Dependencies​

• Externalized lib-pairing module to libseqera by @pditommaso in #958

General​

• Added validation and documentation for commands in the container API by @munishchouhan in #961
• Added support for cross AWS account IAM role authentication by @munishchouhan in #979
• Added Server-Side Request Forgery (SSRF) protection to the validate-creds API by @munishchouhan in #962

Bug fixes​

General​

• Fixed error messages by @munishchouhan in #957
• Added explicit type casts for ECR auth token requests by @pditommaso in #992

Full Changelog: https://github.com/seqeralabs/wave/compare/v1.32.6...v1.33.0

Dependencies​

• Bumped s5cmd to 2.3.0 by @pditommaso in 80cafbc7b

Full Changelog: https://github.com/seqeralabs/wave/compare/v1.32.6...v1.32.7

Compute environments​

• Added m8gn and m8gb instance families to NVMe list.

Datasets​

• Added initial support for datasets linking remote HTTP/HTTPS URLs.

Data Explorer​

• Added support for selecting data-link subfolders directly by subpath.
• Added mountDataV2 API endpoint for mounting data-links with a specified path.

Access control​

• Updated OIDC authentication with PKCE and consent support.

Monitoring​

• Improved accessibility tags on progress bar percentage component.

General​

• Redesigned table component visuals.

Bug fixes​

Studios​

• Fixed Studios analytics query to handle usage edge cases.

Compute environments​

• Fixed httpPutResponseHopLimit specification for AWS instances to allow Nextflow containers to authenticate with the metadata service.
• Fixed 404 errors on legacy pod deletion during Kubernetes compute environment disposal.
• Excluded Micronaut transitive dependencies from sched-pairing-client.

Pipelines​

• Fixed NXF_TML_FILE to use System.getenv in timeline configuration.

Access control​

• Fixed an intermittent login redirect bug.

General​

• Removed all SurrealDB references by @pditommaso in #986
• Simplifed inspect.js code by @pditommaso in #990

Bug fixes​

General​

• Fixed no user in Docker container when using the Conda/Pixi v1 build template by @munishchouhan in #974
• Fixed Wave and Seqera logo in email in mobile view by @munishchouhan in #987
• Fixed inspect view by @munishchouhan in #988

Full Changelog: https://github.com/seqeralabs/wave/compare/v1.32.5...v1.32.6

Compute environments​

• Added support for ${username} dynamic notation in resource labels.

Studios​

• Added configurable SSH timeout parameters for Studios connections.

Pipelines​

• Improved workflow status transitions so that workflows in an unknown state correctly transition to running when a begin trace is received.
• Updated schema radio control labels for clarity.

Bug fixes​

Compute environments​

• Fixed an issue where resourceLabelIds was incorrectly tracked as a versionable compute environment control.

Pipelines​

• Fixed job scheduler transaction rollback handling to prevent data inconsistency when an exception occurs while saving job status.
• Fixed implicit default version resolution for pipelines.

Platform API​

• Fixed Task.getExit() return type alignment to Integer in the API.

Monitoring and observability​

• Fixed cookie banner visibility logic for enterprise deployments to correctly hide the banner when no non-essential cookies are configured.

Upgrade notes​

No breaking changes. Standard upgrade procedure applies.

Data Explorer​

• Added Molstar 3D viewer for PDB and CIF file preview.
• Added Molstar PDB viewer component.

Compute environments​

• Added AWS credential modes (key-based access and role-based access).
• Improved compute environment form warning display with individual stacked alerts.

Pipelines​

• Redesigned workflow notification email template.
• Redesigned report preview modal header layout.
• Improved clipboard UX in workflow details header.
• Updated schema radio control copy.

Access control​

• Refined custom roles UI and added required description field.
• Improved admin workspace list toolbar responsiveness.

General​

• Applied new status icons across Platform components.

Bug fixes​

Studios​

• Removed and renamed outstanding references to rstudio.
• Added backwards compatibility handling for persisted rstudio tool and icon fields.
• Added workspace existence check before creating Studios workspace settings.
• Removed Wave call for Studios version label.
• Fixed R-IDE icon style.

Compute environments​

• Fixed compute environment error handling in forge delegates for createResources and disposeResources.

Pipelines​

• Fixed pipeline implicit default version.
• Removed resourceLabelIds control from versionable controls tracking.

Monitoring​

• Fixed dashboard drop-down scrolling and character overflow.

Datasets​

• Fixed LazyInitializationException in avatar resolution during dataset creation.

General​

• Fixed side navigation width not updating in Safari when toggling collapse state.
• Fixed credits banner showing during page load.

General​

• Updated Seqera logo in Wave reports and mail by @munishchouhan in #981
• Updated Wave logo and icon by @munishchouhan in 984

Full changelog: https://github.com/seqeralabs/wave/compare/v1.32.4...v1.32.5

Language features​

• Allowed boolean params to implicitly default to false by @bentsherman in #6764

Azure Batch​

• Handled Azure Batch ActiveJobAndScheduleQuotaReached with retry by @adamrtalbot in #6874
• Updated default Azure Batch VM image to Ubuntu 24.04 by @adamrtalbot in #6844

Google Batch​

• Reported actual GCP zone in Google Batch trace records by @pditommaso in #6855

LSF​

• Treated LSF job status UNKWN as HOLD by @bentsherman in #5756
• Used explicit memory units for LSF executor by @bentsherman in #5217

General​

• Added agent output mode (NXF_AGENT_MODE) by @edmundmiller in eae9f7d
• Ensured main script is first in the WorkflowRun lineage record by @jorgee in #6845
• Implemented sched core (alpha1) by @pditommaso in #6242

Bug fixes​

S3​

• Fixed S3 delete throwing DirectoryNotEmptyException due to eventual consistency by @pditommaso in #6833
• Fixed S3 lookup unbounded pagination with double call by @jorgee in #6851

General​

• Fixed AgentLogObserver println clash with Groovy GDK method by @pditommaso in c6314d7
• Fixed AnsiLogObserver sticky messages duplicated when lines wrap by @pditommaso in #6852
• Fixed missing space before revision in launch info by @pditommaso in #6834
• Fixed ResourcesAggregator deadlock with virtual thread executor by @pditommaso in #6840
• Fixed vertical alignment in timeline report by @PeterKneale in #6794

Full changelog: https://github.com/nextflow-io/nextflow/releases/tag/v26.02.0-edge

General​

• Added HttpClientAddressResolver in RateLimiterFilter by @munishchouhan in #966

Bug fixes​

General​

• Fixed configuration reference discrepancies by @robsyme in #976

Full Changelog: https://github.com/seqeralabs/wave/compare/v1.32.3...v1.32.4

Compute environments​

• Added External ID support for IAM Role assumption.

Studios​

• Added default privacy setting to the Studio workspace settings form.
• Implemented private Studio by default setting.
• Added dedicated service for handling Studio data-link mappings.

Pipelines​

• Improved optimization profile modal workflow run select responsiveness.

Bug fixes​

Studios​

• Fixed Studio quota limit check for Studios building created with autostart.

Pipelines​

• Showed wall time for running workflows with periodic updates.

Access control​

• Added visibility toggle button to secrets in Secrets table.
• Added secrets list filtering by type.
• Added ability to hide secret inline in Manage Secrets table.

Compute environments​

• Added warning when Azure Batch default VM image was upgraded from Ubuntu 20.04 to 24.04.
• Updated default Azure Batch VM image from Ubuntu 20.04 to 24.04.

General​

• Added pipeline version tracking to Runs table.