As pictured, the legendary T3 productivity modules for the Substations and Assembling Machine 1 recipes. All machines and recipes are affected.

Do you have steps to reproduce? When I test, it removes the modules from the machine.

From your screenshot I was able to guess it's related to the map editor and map editor instant building. While not a huge deal (since the map editor can cheat and do a lot of stuff normally not allowed) I changed it for the next release anyway. Outside of the map editor it does not allow invalid modules and will simply remove them on setting the incompatible recipe through parameterization.