NZ617418B2 - Antimicrobial/adjuvant compounds and methods - Google Patents
Antimicrobial/adjuvant compounds and methods Download PDFInfo
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- NZ617418B2 NZ617418B2 NZ617418A NZ61741812A NZ617418B2 NZ 617418 B2 NZ617418 B2 NZ 617418B2 NZ 617418 A NZ617418 A NZ 617418A NZ 61741812 A NZ61741812 A NZ 61741812A NZ 617418 B2 NZ617418 B2 NZ 617418B2
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- YEIGUXGHHKAURB-UHFFFAOYSA-N viridine Natural products O=C1C2=C3CCC(=O)C3=CC=C2C2(C)C(O)C(OC)C(=O)C3=COC1=C23 YEIGUXGHHKAURB-UHFFFAOYSA-N 0.000 description 1
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Classifications
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/41—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with two or more ring hetero atoms, at least one of which being nitrogen, e.g. tetrazole
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K45/00—Medicinal preparations containing active ingredients not provided for in groups A61K31/00 - A61K41/00
- A61K45/06—Mixtures of active ingredients without chemical characterisation, e.g. antiphlogistics and cardiaca
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/04—Antibacterial agents
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D257/00—Heterocyclic compounds containing rings having four nitrogen atoms as the only ring hetero atoms
- C07D257/02—Heterocyclic compounds containing rings having four nitrogen atoms as the only ring hetero atoms not condensed with other rings
- C07D257/04—Five-membered rings
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D333/00—Heterocyclic compounds containing five-membered rings having one sulfur atom as the only ring hetero atom
- C07D333/02—Heterocyclic compounds containing five-membered rings having one sulfur atom as the only ring hetero atom not condensed with other rings
- C07D333/04—Heterocyclic compounds containing five-membered rings having one sulfur atom as the only ring hetero atom not condensed with other rings not substituted on the ring sulphur atom
- C07D333/26—Heterocyclic compounds containing five-membered rings having one sulfur atom as the only ring hetero atom not condensed with other rings not substituted on the ring sulphur atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
- C07D333/38—Carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D409/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms
- C07D409/02—Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing two hetero rings
- C07D409/04—Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing two hetero rings directly linked by a ring-member-to-ring-member bond
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D409/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms
- C07D409/14—Heterocyclic compounds containing two or more hetero rings, at least one ring having sulfur atoms as the only ring hetero atoms containing three or more hetero rings
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D417/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00
- C07D417/02—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing two hetero rings
- C07D417/04—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing two hetero rings directly linked by a ring-member-to-ring-member bond
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
Abstract
Disclosed are antimicrobial and adjuvant compounds according to Formulae Ia and Ib where the substituents are as defined herein. Also disclosed are prodrugs and pharmaceutically acceptable salts thereof of the compounds and the use of the compounds as antimicrobials and in the manufacture of medicaments for the treatment of microbial infection. ents for the treatment of microbial infection.
Description
ANTIMICROBIAL / ADJUVANT COMPOUNDS AND METHODS
CROSS—REFERENCE TO RELATED APPLICATION
This application claims the benefit of U.S. Provisional Application Ser. No.
61/448,682, filed March 3, 2011, the t of which is hereby incorporated by
reference in its entirety.
BACKGROUND
Infection is an invasion of a host organism by a foreign organism, lly to the
detriment of normal function in the host. In treating humans and other animals for
infection and post-infective atory disease (e.g. septic shock), practitioners usually
rely on chemical compounds known to have antibiotic affects, whether antiviral,
cterial, antifungal, or the like.
Unfortunately, many ens have become resistant to current otic
treatments. Antibiotic resistance is therefore an increasingly significant clinical issue,
calling for novel antibiotics. ally valuable would be new antimicrobial adjuvant
compounds, which, while not necessarily antimicrobial themselves, can se the
potency, efficacy, and/or spectrum of activity of antibiotics when co—administered or
given as combination therapy. There is a need for new antimicrobials and new
antimicrobial adjuvant compounds.
SUMMARY
The compounds ofthe present invention are of utility in antimicrobial infections.
In some cases, the compounds are themselves antimicrobial. In some cases, the
nds (“antimicrobial adjuvants”) have beneficial effects in conjunction with an
antimicrobial, reducing the dose of antibiotic required for antimicrobial activity when
administered in combination. In some cases, the compounds are both antimicrobial and
antimicrobial adjuvants.
In l, in an aspect, compounds of a Ia are provided:
W0 2012/116452
R10 (la)
in which E is ~CH2~ or is absent such that ene is directly connected to phenyl; R1,
R2, R9, Rm, and R“ are each independently hydrogen, methyl, ethyl, propyl, cyclopropyl,
butyl, cyclobutyl, pentyl, hexyl, isopropryl, isobutyl, neopentyl, methoxy, or ethoxy;
additionally, R1 and R2 may connect to form a phenyl or benzofuran ring; additionally, R9
and Rm may connect to form a phenyl or benzofuran ring; R3 and R3 are each
independently hydrogen, methyl, ethyl, , isopropyl, chlorine, fluorine, tert—butyl,
methylsulfonyl, methoxy, or ethoxy; R4 and R7 are each independently en,
chlorine, methyl ester, ethyl ester, methyl, ethyl, propyl, cyclopropyl, bury], cyclobutyl,
isopropryl, yl, methoxy, or ethoxy; and R5 and R5 are each independently
hydrogen, cyclopentyl, ropyl, furan, thiophene, trifluoromethyl, romethyl
ether, lthiol, formaldehyde, chlorine, fluorine, bromine, phenyl, methyl, ethyl,
isopropyl, , butyl, cyclobutyl, isobutyl, neOpentyl, pentyl, methoxy, or .
In general, in an aspect of the invention, a method, of treatment of a microbial
infection is provided including administering an effective amount of an antimicrobial
compound disclosed herein to a patient in need thereof.
In general, in an aspect of the invention, a method of treatment of a microbial
infection is provided including administering an effective amount of an antimicrobial
W0 2012/116452
adjuvant compound disclosed herein and an effective amount ofan antimicrobial
compound to a patient in need thereof.
Compounds of other formulae are provided as described in the Detailed
Description below.
BRIEF DESCRIPTION OF GS
s thiophene- or thiazole~core compounds and ated compound
identifiers of the present invention, along with their respective minimum inhibitory
concentrations against MRSA generally following the procedure in Example 9
(“MRSA_MIC” ed in uM).
depicts phenyl-core compounds and associated compound identifiers of the
present ion.
DETAILED DESCRIPTION
Definitions
Unless otherwise defined, terms as used in the specification refer to the following
definitions, as detailed below.
The term “acyl” as used herein means an alkyl group, as defined herein, ed
to the parent molecular moiety through a carbonyl group, as defined herein.
Representative es of acyl include, but are not limited to, , 1~oxopropyl, 2,2-
dimethyl—I-oxopropyl, l-oxobutyl, and 1-oxopentyl'.
The term “acyloxy” as used herein means an acyl group, as defined herein,
appended to the parent molecular moiety through an oxygen atom. Representative
examples of acyloxy include, but are not limited to, acetyioxy, propionyloxy, and
isobutyryloxy.
The terms “administration” or “administering” compound should be understood to
mean providing a compound of the present invention to an individual in a form that can
be introduced into that individual’s body in an amount effective for prophylaxis,
treatment, or diagnosis, as applicable. Such forms may include for e oral dosage
forms, injectable dosage forms, transdermal dosage forms, inhalation dosage forms, and
rectal dosage forms.
The term “alkenyl” as used herein means a straight chain, branched and/or cyclic
hydrocarbon having fr0m 2 to 20 (tag, 2 to 10 or 2 to 6) carbon atoms, and including at
least one carbOn-carbon double bond. Representative alkenyl moieties include vinyl,
allyl, l-butenyl, 2-butenyi, isobutylenyl, 1-pentenyl, Z-pentenyl, 3-methyl-l-butenyl, 2-
methyl-Z-butenyl, 2,3—dimethyl—2—butenyl, l—hexenyl, 2—hexeny1, 3~hexenyi, 1—heptenyl,
2-heptenyl, 3—heptenyl, nyl, 2—octenyl, 3-octenyl, 1-nonenyl, 2—nonenyl, 3—nonenyl,
nyl, 2-deceny1 and 3-decenyl.
The term “alkoxy” as used herein means an alkyl group, as defined herein,
appended to the parent molecular moiety through an oxygen atom. Representative
examples of aikoxy include, but are not limited to, methoxy, ethoxy, propoxy, 2—propoxy,
butoxy, tert—butoxy, pentyloxy, and hexyloxy.
The term “alkoxyalkoxy” as used herein means an alkoxy group, as defined
herein, appended to the parent molecular moiety through another alkoxy group, as
defined herein. Representative examples of alkoxyalkoxy include, but are not limited to,
tert-butoxymethoxy, 2—ethoxyethoxy, 2-methoxyethoxy, and methoxymethoxy.
The term “alkoxyalkyl” as used herein means an alkoxy group, as defined ,
appended to the parent molecular moiety through an alkyl group, as defined herein.
Representative es of alkoxyalkyl include, but are not limited to, tert-
butoxymethyl, 2-ethoxyethyl, oxyethy1, and methoxymethyl.
The term “alkoxycarbonyl” as used herein means an alkoxy group, as defined
herein, appended to the parent molecular moiety through a carbonyl group, as defined
herein. Representative examples of alkoxycarbonyl include, but are not limited to,
methoxycarbonyl, carbonyl, and tert—butoxycarbonyl.
The term “alkoxyimino” as used herein means an alkoxy group, as defined herein,
ed to the parent lar moiety through an imino group, as defined herein.
Representative examples of alkoxyimino include, but are not limited to,
ethoxy(imino)methyl and methoxy(imino)methyl.
The term “alkoxysulfonyl” as used herein means an alkoxy group, as defined
herein, appended to the parent molecular moiety h a yl group, as defined
herein. Representative es of alkoxysulfonyl include, but are not limited to,
methoxysulfonyl, ethoxysulfonyl, and propoxysulfonyl.
The term “alkyl” as used herein means a straight or branched chain arbOn
containing from 1 to 20 carbon atoms, preferably from 1 to 10 carbon atoms, more
W0 2012/116452 2012/050130
preferably 1, 2, 3, 4, 5, or 6 carbons. Representative examples of alkyl include, but are
not limited to, methyl, ethyl, n—propyl, iso—propyl, nubutyl, sec-butyl, iso-butyl, tert~butyl,
n~pentyl, isopentyl, neopentyl, l, 3-methylhexyl, 2,2—dimethy1pentyl, 2,3-
dimethylpentyl, n—heptyl, n—octyl, n—nonyl, and n-decyl.
The term “alkylarnino” as used herein means an alkyl group, as defined ,
ed to the parent molecular moiety through a NH group. Representative examples
of alkylamino include, but are not limited to, methylamino, ethylarnino, isopropylamino,
and butylamino.
The term “alkylcarbony ” as used herein means an alkyl group, as defined herein,
appended to the parent molecular moiety through a carbonyl group, as defined herein.
Representative examples of alkylcarbonyl include, but are not limited to, methylcarbonyl,
ethylcarbonyl, isopropylcarbonyl, n-propylcarbonyl, and the like.
The term “alkylsulfonyl” as used herein means an alkyl group, as defined herein,
appended to the parent molecular moiety through a sulfonyl group, as defined herein.
Representative es of alkylsulfonyl include, but are not limited to, sulfonyl
and ethylsulfonyl.
The term “alkynyl” as used herein means a straight or branched chain
hydrocarbon group containing from 2 to 10 carbon atoms, and preferably 2, 3, 4, or 5
carbons, and containing at least one carbon—carbon triple bond. Representative es
of alkynyl include, but are not limited to, enyl, l-propynyl, 2—propynyl, nyl,
2—pentyny1, and l-butynyl.
The term “amido” as used herein means an amino, alkylamino, or dialkylarnino
group appended to the parent molecular moiety through a carbonyl group, as defined
herein. Representative examples of amide include, but are not d to, aminocarbonyl,
methylaminocarbonyl, ylaminocarbonyl, and ethylrnethylarninocarbonyl.
The term “amino” as used herein means a —NH2 group.
The term “aryl” as used herein means a monocyclic hydrocarbon aromatic ring
system. Representative es of aryl include, but are not limited to, phenyl.
The term “arylalkyl” as used herein means an aryl group, as defined herein,
appended to the parent molecular moiety through an alkyl group, as defined herein.
Representative examples 'of arylalkyl include, but are not limited to, benzyl, 2-
phenylethyl and 3-phenylpropyl.
The term “carbonyl” as used herein means a —C(=O)— group.
The term “carboxy” as used herein means a —COOH group, which may be
protected as an ester group: alkyl.
The term “cyano” as used herein means a —CN group.
The term “cyanophenyl” as used herein means a —CN group appended to the
parent molecular moiety h a phenyl group, including, but not limited to, 4-
cyanophenyl, 3-cyanophenyl, and Z-cyanophenyl.
The term “cycloalkyl” as used herein means a saturated cyclic hydrocarbon gr0up
containing from 3 to 8 carbons. Examples of lkyl include cyclopropyl, cyclobutyl,
cyclopentyl, cyclohexyl, cycloheptyl, and cyclooctyl.
The term “cycloalkylcarbonyl” as used herein means a lkyl group, as
defined herein, appended to the parent molecular moiety through a carbonyl group, as
defined . Representative examples of cycloalkylcarbonyl include, but are not
limited to, cyclopropylcarbonyl, cyclopentylcarbonyl, cyclohexylcarbonyl, and
cycloheptylcarbonyl.
The term “dialkylamino” as used herein means two independent alkyl groups, as
defined herein, appended to the parent molecular moiety through a nitrogen atom.
Representative examples of lamino include, but are not limited to, dimethylamino,
lamino, ethylrnethylamino, and butylrnethylamino.
The term “fluoro” as used herein means —F.
The term “fluoroalkoxy” as used herein means at least one fluoroalkyl group, as
defined herein, ed to the parent molecular moiety through an oxygen group, as
defined herein. Representative examples of fluoroalkyl include, but are not limited to,
tn'fluoromethoxy (CF30-), and difluoromethoxy (CHF20—).
The term “fluoroalkyl” as used herein means at least one fluoro group, as defined
herein, appended to the parent molecular moiety h an alkyl' group, as defined
herein. entative examples of fluoroalkyl include, but are not limited to,
fluoromethyl, difluoromethyl, trifluoromethyl, pentafluoroethyl, and 2,2,2—trifluoroethyl.
The term “formyl” as used herein means a —C(O)H group.
The term “halo” or “halogen” as used herein means Cl, Br, I, or F.
The term “haloalkoxy” as used herein means at least one halogen, as defined
herein, appended to the parent molecular moiety through an alkoxy group, as defined
herein. Representative examples of haloalkoxy include, but are not limited to, 2—
fluoroethoxy, trifluoromethoxy, and pentafluoroethoxy.
The term “haloalkyl” as used herein means at least one halogen, as defined herein,
appended to the parent lar moiety h an alkyl group, as defined .
Representative examples of haloalkyl include, but are not limited to, chloromethyl, 2-
fluoroethyl, romethyl, pentafluoroethyl, and 2-chloro-3 -fluoropentyl.
The term “heteroaryl”, as used herein, refers to an ic ring containing one or
more heteroatoms independently selected from nitrogen, oxygen, or sulfur, or a tautomer
thereof. Such rings can be monocyclic or bicyclic as further described herein. Heteroaryl
rings are connected to the parent molecular moiety through a carbon or nitrogen atorn.
The terms “monocyciic heteroaryl” or “5— or 6-membered heteroaryl ring”, as
used herein, refer to 5» or 6-membered ic rings containing 1, 2, 3, or 4 heteroatoms
independently selected from nitrogen, oxygen, or sulfiir, or a tautomer thereof. es
of such rings include, but are not limited to, a ring wherein one carbon is replaced with an
O or atom; one, two, or three N atoms arranged in a suitable manner to provide an
ic ring; or a ring wherein two carbon atoms in the ring are replaced with one 0 or
S atom and one N atom. Such rings can include, but are not limited to, a six—membered
aromatic ring wherein one to four of the ring carbon atoms are replaced by nitrogen
atoms, mbered rings containing a sulfur, oxygen, or nitrogen in the ring; five
membered rings containing one to four nitrogen atoms; and five membered rings
containing an oxygen or sulfur and one to three nitrogen atoms. Representative examples
of 5— to 6-membered heteroaryl rings include, but are not limited to, furyl, imidazolyl,
isoxazolyl, isothiazolyl, oxazolyl, pyrazinyl, lyl, zinyl, pyridinyl,
pyrimidinyl, pyrrolyl, tetrazolyl, {1,2,3]thiadiazolyl, [1,2,3]oxadiazolyl, thiazolyl, thienyl,
[1,2,3]triazinyl, [l riazinyl, [1 riazinyl, [1 ,2,3]triazoly1, and {l,2,4]triazolyl.
The term lic heteroaryl” or “8- to 12-membered bicyclic heteroaryl ring”, as used
herein, refers to an 8-, 9-, 10-, 11-, or lZ-membered bicyclic aromatic ring containing at
least 3 double bonds, and wherein the atoms ofthe ring include one or more heteroatoms
W0 2012/116452
independently selected fi'om oxygen, , and nitrogen. Representative examples of
bicyclic aryl rings include indolyl, benzothienyl, benzofirranyl, indazolyl,
benzimidazolyl, hiazolyl, benzoxazolyl, benzoisothiazolyl, benzoisoxazolyl,
quinolinyl, isoquinolinyl, quinazolinyl, quinoxalinyl, phthalazinyl, pteridinyl, purinyl,
yridinyl, inyl, thieno[2,3-d]imidazole, thieno[3,2-b]pyridinyl, and
pyrrolopyrimidinyl.
The terms “heterocyclic ring” and “heterocycle”, as used , refer to a 4— to
12-membered monocyclic or bicyclic ring containing one, two, three, four, or five
heteroatoms independently selected from the group consisting of nitrogen, oxygen, and
sulfur and also containing either at least one carbon atom attached to four other atoms or
one carbon atom substituted with an oxo group and attached to two other atoms. Four-
and five-membered rings may have zero or one double bond. Six-membered rings
have zero, one, or two double bonds. Seven— and eight-membered rings may have zero,
one, two, or three double bonds. The non-aromatic heterocycie groups ofthe invention
can be attached through a carbon atom or a nitrogen atom. The non-aromatic heterocycle
groups may be present in tautomeric form. Representative examples of nitrogen-
containing heterocycles e, but are not limited to, azepanyl, inyl, aziridinyl,
azocanyl, dihydropyridazinyi, dihydropyridinyl, dihydropyrimidinyl, morphoiinyl,
piperazinyl, piperidinyl, pyrrolidinyl, pyrrolinyl, dihydrothiazolyl, dihydropyridinyl, and
thiomorpholinyl. Representative examples of non—nitrogen containing non—aromatic
heterocycles include, but are not limited to, dioxanyl, dithianyl, tetrahydrofuryl,
dihydropyranyl, tetrahydropyranyl, and [1,3]dioxolany1.
The term “hydroxy” as used herein means an ——OH group.
The term “hydroxyalkyi” as used herein means at least one y group, as
defined herein, appended to the parent molecular moiety through an alkyl group, as
defined herein. Representative examples oxyalkyl include, but are not limited to,
hydroxymethyi, 2-hydroxyethyl, 2—methyl-2—hydroxyethyl, 3~hydroxypropyl, 2,3-
dihydroxypentyl, and 2—ethyl-4—hydroxyheptyl.
The term “hydroxy-protecting group” means a tuent which ts
hydroxyl groups against undesirable reactioris during synthetic procedures. Examples of
hydroxy—protecting groups include, but are not limited to, methoxymethyl,
W0 2012/116452
benzyloxymethyl, 2-methoxyethoxymethyl, methylsi1yl)ethoxymethyl, benzyl,
triphenylmethyl, 2,2,2-trichloroethyl, tubutyl, trimethylsilyl, ldimethylsiiyl, tbutyldiphenylsilyl
, methylene acetal, acetonide benzylidene acetal, cyclic ortho esters,
methoxymethylene, cyclic carbonates, and cyclic boronates. Hydroxy-protecting groups
are appended onto hydroxy groups by reaction of the compound that contains the
hydroxy group with a base, such as triethylamine, and a reagent selected from an alkyl
halide, alkyl trifilate, trialkylsilyl halide, triallcylsilyl triflate, alyldialkylsilyltriflate, or an
hloroformatc, CHzlz, or a dihaloboronate ester, for example with methyliodide,
benzyl , tn'ethylsilyltriflate, acetyl chloride, benzylchloride, or dimethylcarbonate.
A protecting group also may be appended onto a hydroxy group by reaction of the
compound that contains the y group with acid and an alkyl acetal.
The term “imino” as defined herein means a—C(=NH)— group.
The term “mercapto” as used herein means a —SH group.
The term “nitro” as used herein means a—NOZ group.
The term “nitrogen protecting group" as used herein means those groups intended
to protect a nitrogen atom against undesirable reactions during synthetic procedures.
Nitrogen protecting groups comprise carbamates, amides, Nubenzyl derivatives, and
imine derivatives. Preferred nitrogen protecting groups are , benzoyl, benzyl,
benzyloxycarbonyl (Cbz), formyI, phenylsulfonyl, pivaloyl, tert-butoxycarbonyl (Boo),
tert-butylacetyl, trifluoroacetyl, and triphenylmethyl (trityl). Nitrogen-protecting groups
are appended onto y or secondary amino groups by reacting the nd that
contains the amine group with base, such as triethylarnine, and a reagent selected from an
alkyl , an alkyl te, a dialkyl anhydride, for example as represented by (alkyl-
0) 2 C=O, a diaryl ide, for example as represented by (aryl-O) 2 CmO, an acyl
halide, an hloroformate, or an alkylsulfonylhalide, an arylsulfonylhalide, or halo-
CON(alkyl) 2 for example acetylchloride, benzoylchloride, benzylbromide,
benzyloxycarbonylchloride, formylfluoride, phenylsulfonylchloride, pivaloylchloride,
(tert—butyl~O—-C=O) 2 O, trifluoroacetic anhydride, and nylmethylchloride.
The term “oxo” as used herein means (w).
Unless ise indicated, the term “prodrug” encompasses pharmaceutically
acceptable esters, carbonates, thiocarbonates, N-acyl derivatives, N—acyloxyalkyl
W0 2012/116452
derivatives, quaternary derivatives of tertiary amines, N—Mannich bases, Schiff bases,
aminoacid conjugates, phosphate esters, metal salts and ate esters of compounds
disclosed herein. Examples ofprodrugs include compounds that comprise a
biohydrolyzable moiety (e.g., a biohydrolyzable amide, biohydrolyzable carbamate,
rolyzable carbonate, biohydrolyzable ester, biohydrolyzable phosphate, or
biohydrolyzable ureide analog). Prodrugs ofcompounds disclosed herein are readily
envisioned and ed by those of ordinary skill in the art. Sec,
e.g., Design of
Prodrugs , Bundgaard, A. Ed, Elseview, 1985; Bundgaard, hours, “Design and
Application of Prodrugs,” A ok of Drug Design and Development , Krosgaard-
Larsen and hours. Bundgaard, Ed., 1991, Chapter 5, p. 113-491; and Bundgaard, hours,
ed Drug Delivery Review, 1992, 8, l-38.
Unless otherwise indicated, the term “protecting group” or “protective group,”
when used to refer to part of a molecule ted to a chemical reaction, means a
chemical moiety that is not reactive under the conditions of that chemical reaction, and
which may be removed to provide a moiety that is reactive under those conditions.
Protecting groups are well known in the art. See, e.g., Greene, T. W. and Wuts, P.G.M.,
Protective Groups in Organic Synthesis (3 rd ed., John Wiley & Sons: 1999); Larock, R.
C., hensive Organic Transformations (2nd ed., John Wiley & Sons: 1999). Some
examples include , diphenylmethyl, trityl, Cbz, Boc, Fmoc, methoxycarbonyl,
ethoxycar‘oonyl, and pthalimido. ting groups include, for example, nitrogen
protecting groups and hydroxy-protecting groups.
The term nyl” as used herein means a —S(O)2 — group.
The term “thioalkoxy” as used herein means an alkyl group, as defined herein,
appended to the parent molecular moiety through a sulfur atom. Representative examples
ofthioalkoxy include, but are no limited to, methylthio, ethylthio, and propylthio.
n nds ofthe present invention may exist as stereoisomers wherein,
asymmetric or chiral centers are present. These stereoisorners are “R” or “S” depending
on the configuration of substituents around the chiral carbon atom. The terms “R” and
“S” used herein are configurations as defined in IUPAC 1974 Recommendations for
Section E, Fundamental Stereochemistry, in Pure Appl. Chem, 1976, 45: 13—30. The
invention contemplates various stereoisomers and mixtures thereof and these are
2012/050130
cally included within the scope of this invention. Stereoisomers include
enantiomers and diastereorners, and mixtures of enantiomers or diastereomers. Individual
stereoisomers of compounds of the invention may be prepared synthetically from
commercially available starting materials which contain asymmetric or chiral centers or
by preparation of racemic mixtures followed by resolution well known to those of
ordinary skill in the art. These methods of resolution are exemplified by (1) attachment of
a mixture ofenantiomers to a chiral auxiliary, separation of the resulting mixture of
diastereomers by recrystallization or chromatography and optional liberation of the
Optically pure product from the auxiliary as described in s, Hannaford, Smith, and
Tatchell, “Vogel's Textbook ofPractical Organic Chemisuy”, 5th edition (1989),
Longman Scientific & Technical, Essex CM20 2JE, England, incorporated herein by
reference for the disclosure of s for separation and purification of diastereomers or
(2) direct tion of the mixture of optical enantiomers on chiral chromatographic
columns or (3) fractional recrystallization s.
n compounds of the present ion may exist as cis or trans isomers,
wherein substituents on a ring may attached in such a manner that they are on the same
side of the ring-(cis) relative to each other, or on opposite sides of the ring relative to each
other (trans). Such methods are well known to those of ry skill in the art, and may
include tion of s by recrystallization or chromatography. It should be
understood that the compounds of the invention may possess tautomeric forms, as well as
geometric isomers, and that these also constitute an aspect of the invention.
It should be noted that a chemical moiety that forms part of a larger compound
may be described herein using a name commonly accorded it when it exists as a single
molecule or a name commonly accorded its radical. For example, the terms “pyridine”
and “pyridyl” are accorded the same meaning when used to describe a moiety attached to
other chemical moieties. Thus, for example, the two phrases “XOH, wherein X is
l” and “XOH, wherein X is pyridine” are accorded the same meaning, and
encompass the compounds pyridin-Z-ol, pyridin—3-ol and pyridin—4~ol.
It should also be noted that names of compounds having one or more chiral
centers that do not specify the stereochemistry of those centers encompass pure
stereoisomers and mixtures thereof. Moreover, any atom shown in a drawing with
WO 16452
unsatisfied valences is d to be attached to enough hydrogen atoms to
satisfy the
valences. In addition, chemical bonds depicted with one solid line parallel to one dashed
line encompass both single and double (e.g., ic) bonds, if valences permit.
The term “phannaceutically acceptable excipient”, as used herein, means a non-
toxic, inert solid, semi-solid or liquid filler, diluent, encapsulating material or formulation
auxiliary of any type. Some examples of materials which can serve as pharmaceutically
acceptable carriers are sugars such as lactose, glucose and sucrose; starches such as corn
starch and potato starch; ose and its tives such as sodium carboxymethyl
cellulose, ethyl cellulose and cellulose acetate; powdered tragacanth; malt; gelatin; talc;
cocoa butter and suppository waxes; oils such as peanut oil, cottonseed oil, safflower oil,
sesame oil, olive oil, corn oil and soybean oil; glycols; such a propylene glycol; esters
such as ethyl oleate and ethyl laurate; agar; buffering agents such as magnesium
ide and aluminum hydroxide; alginic acid; pyrogen—i’ree water; isotonic saline;
Ringer's on; ethyl alcohol, and phosphate buffer solutions, as well as other non—
toxic compatible lubricants such as sodium lauryl e and magnesium stearate, as well
as coloring agents, releasing agents, coating agents, sweetening, flavoring and perfuming
agents, preservatives and antioxidants can also be present in the composition, according
to the judgment of one d in the art of formulations.
Unless otherwise indicated, a “therapeutically effective amount” of a compound is
an amount sufficient to treat a disease or condition, or one or more ms associated
with the disease or condition. In some embodiments, “treatment” may be determined by
comparison to an untreated control.
- The term “subject” is intended to include living organisms in which disease may
occur. Examples of subjects include humans, s, cows, sheep, goats, dogs, cats,
mice, rats, and transgenic Species thereof.
The present invention is based, at least in part, on the design of nds that
inhibit acyl carrier protein (ACP) synthase (AcpS), the enzyme responsible for converting
apo—ACP into holo-ACP. AcpS is present not only in Gram-positive and -negative
bacteria, but also in acid-fast bacteria such as cterium tuberculosis, and even in
protozoa such as dz‘umfalciparum. Accordingly, AcpS inhibitors are expected to
have deleterious effects on the viability of many microbes. AcPS inhibitors are be
expected to have deleterious effects on the maintenance ofmicrobial cell function,
including, for example, increased porosity of cell membranes and dysfunction of efflux
pumps in such membranes. The spectrum of activity demonstrated for compounds of the
present invention includes many Gram-positive bacteria including Methicillinwresistant S.
aureus, with selected compounds retaining activity against Gram-negative pathogens
such as PS. aeruginosa, Ac. ii, and S. maltophilz'a, and the like. Compounds of
the t invention with low or no antimicrobial potency against, for example, PS.
aeruginosa, may have antimicrobial adjuvant (“adjuvant” or “pro-antibiotic”) s
when co—administered with antimicrobial nds such as, for example, azithromycin,
erythromycin, or ampiciliin, or with crobial compounds ofthe present ion.
Though the utility of the compounds disclosed herein does not dependper se on their
being AcpS tors, the design effects toward that goal resulted, at least in part, in the
discovery of the compounds ofthe present invention.
According to an embodiment, a compound, or prodrug or pharmaceutically
acceptable salt f, is provided according to one of Formulas I or has as structure as
set forth in one of Formulas I:
2012/050130
R1 R3
//N‘“‘~NH R4
\N/ S
\ / R?
N R3
R10 (1b)
in which E is ~CH2— or is absent whereby thiophene is directly connected to phenyl,
R1, R2, R9, R10, and Rn (ifpresent) are each independently selected from the group
consisting ofhydrogen, methyl, ethyl, propyl, cyclopropyi, butyl, cyciobutyl, pentyl,
hexyl,isopropry1, isobutyl, neopentyl, methoxy, and ethcxy;
additionally, R1 and R2 may connect to form a phenyi or benzofuran ring;
onally, R9 and R10 may connect to form a phenyl or benzofuran ring;
R3 and R3 are each independently selected from the group consisting ofhydrogen,
methyl, ethyl, propyl, isopropyl, chlorine, fluorine, tert-butyl, methylsulfonyl, methoxy,
and ethoxy;
R4 and R7 are each independently selected from the group consisting ofhydrogen,
chlorine, methyl ester, ethyl ester, methyl, ethyl, prOpyl, cyclopropyl, butyl, cycIobutyl,
isopropryl, yl, methoxy, and ethoxy;
and R5 and R5 are each independently selected from the group consisting of en,
cyclopentyl, cyclopropyl, furan, thiophene, romethyl, tn'fluoromethyl ether,
methylthiol, formaldehyde, ne, e, bromine, phenyl, methyl, ethyl, isopropyl,
propyl, butyl, cyclobutyl, isobutyl, neopentyl, pentyl, methoxy, and ethoxy.
WO 16452 2012/050130
In some embodiments, R3 and R2 are either independently selected from the group
consisting ofhydrogen and , or form a phenyl ring whereby the ring system is
naphthyl; R9 and R10 are either independently selected from the group consisting of
hydrogen and methyl, or form a phenyl ring whereby the ring system is naphthyl; R11 is
hydrogen; R3 and R3 are each independently selected fi'om the group consisting of
hydrogen, methyl, chlorine, fluorine, isopropyl, tert-butyl, methoxy, and methylsulfonyl;
R4 and R7 are each independently selected from the group consisting of hydrogen,
methyl, chlorine, and ethyl ester; and R5 and R6 are each independently selected from the
group consisting of methyl, ethyl, phenyl, hydrogen, chlorine, isopropyl, entyl,
bromine, ropyl, trifluorornethyl, trifluoromethyl ether, methylthiol, formaldehyde,
furan, and thiophene. In some embodiments, E is absent. In some embodiments, R1, R2,
R4, R7, R9, and Rm are each hydrogen. In some embodiments, R3 and R3 are each
chlorine; and R5 and R5 are selected from the group consisting of hydrogen, methyl, and
isopropyl. In a preferred ment, the compound is DNM0488. In a preferred
embodiment, the compound is DNM0548. In a preferred embodiment, the compound is
DNMO606. In a preferred ment, the compound is DNMO631. (These compound
identifiers are given ing to ) In a preferred embodiment, the compound is
selected from the group consisting of those compounds listed in
According to an embodiment, a compound, or prodrug or pharmaceutically
acceptable salt thereof, is provided according to one of Formulas II:
W0 2012/116452 2012/050130
(IIb)
in which
R1, R2, R3, R5, and R12 are each independently selected from the group consisting of
hydrogen, methyl, ethyl, propyl, cyclopropyl, butyl, Cyclobutyl, pentyl, hexyl, isopmpryl,
isobutyl, neopentyl, methoxy, and ;
R4, and R13 are each ndently selected frorn the group consisting of hydrogen,
methyl, ethyl, propyl, cyclopropyl, butyl, cyclobutyl, pcntyl, hexyl, isopropryl, isobutyl,
neopentyl, methoxy, ethoxy, and dialkylamine;
additionally, R4 and R5 may connect to form a phenyl ring;
additionally, R12 and R13 may connect to form a phenyl ring;
R6 and R“ are each independently selected from the group consisting of hydrogen,
chlorine, e, hydroxy, phenyl ether, methyl, ethyl, propyl, i30propyl, tert-butyl,
methoxy, and ethoxy;
R1 and R19 are each independently selected from the group consisting ofhydrogen,
chlorine, methyl, ethyl, propyl, isopropyl, tert—butyl, methoxy, and ethoxy;
and R8 and R9 are each independently selected from the group consisting of en,
halogen, methyl, ethyl, propyl, isopropyl, tert-butyl, methoxy, ethoxy, yl
optionally tuted with methyl, and phenyl optionally substituted with chlorine,
bromine, carboxylic acid, and alkyl.
In some embodiments, R5 and R11 are each independently selected from the
group
consisting ofhydrogen, chlorine, fluorine, hydroxy, phenyl ether, and alkyl; R7 and R10
are each independently ed from the group consisting ofhydrogen, chlorine, and
alkyl; and R3 and R9 are each independently selected from the group consisting of
hydrogen, halogen, methyl, isopropyl, naphthyl ally substituted with methyl, and
phenyl optionally substituted with chlorine, bromine, carboxylic acid, and alkyl. In some
embodiments, the compound is according to a 1121. In some embodiments, the
compound is a compound according to Formula 111). In a preferred embodiment, the
compound is selected from the group consisting of those compounds listed in
In a preferred embodiment of the invention, a compound is selected from the
group consisting of 5-(4,5-Bis(4-chloro-2—methylpheny1)thiophen-Z—yl)-lH-tetrazole
(DNM0488), 5-(4,5—Bis(4—methy1naphthalenyl)thiophen~2-yl)—1 H—tetrazole
(DNMO486), 5~(4,5—Bis(4-chlorophenyl)thiophen-Z—yl)-lH—tetrazole (DNM0487), 5—(4,5-
Di(biphenyl-2~yl)thiophen—2-yl)-1H~tetrazole (DNMO489), 5—(4,5-Bis(3-chloro
methylphenyl)thiophen-2—yl)-1H-tetrazole (DNM0504), 5-(4,5—Bis(5-chloro
methylphenyl)thiophenyl)-lH—tetrazole (DNMOSOS), 5—(4,5—Bis(3,4-
dimethylphenyl)thiophen—2~yl)-lH—tetrazole (DNM0509), -Bis(4-
pylphenyl)thiophen-2~yl)~1H—tetrazole (DNMOSIZ), 5-(4,5—Bis(2-
methylphenyl)thiophen-Z-yl)—1H—tetrazole (DNM0531), 5-(4,S-Bis(2-
isopropylphenyl)thiophen—2-yl)-1I-I-tetrazole (DNM0534), 5-(4,5-Bis(2»
phenoxyphenyl)thiophen-2—yl)—lH—tetrazole (DNM0536), 5—(4,5~Bis(4—fluoronaphthalen-
l—yl)thiophen—2—yl)—lH-tetrazole (DNM0537), 5-(4,5-Bis(2-chlorophenyl)thiophen~2-yl)-
lH—tetrazole (DNM053 8), —Bis(2—ethyl~phenyl)thiophen—2-yl)—lH-tetrazole
. (DNMOS41), 5-(4,5-Bis(dibenzo[b,d]fiiranyl)thiophen-2—yl)~lH-tetrazole 42),
-(4,5-Di(benzofuranyl)thiophenyl)-lH-tetrazole 43), -Bis(2-
yphenyl)thiophenyl)-1H—tetrazole (DNM0544), 5-(4,5-Bis{2,3-
dimethoxyphenyl)thiophen—2-yl)-1H—tetrazole (DNM0545), 5-(4,5-Bis(4-tert-
butylphenyl)thi0pheny1)— l H—tetrazole (DNM0546), 544,5~Bis(4-chloro—2-iso-
propylphenyl)thiophen—2-yl)-lH—tetrazole (DNM0548), 5—(4,5—Bis(2—
(trifluoromethyl)phenyl)thi0phen-2—yl)~lH-tetrazole (DNM0549), 5-(4,5-Bis(2-
(trifluoromethoxy)phenyl)thiophen—2-yl)—lI-I-tetrazole (DNMOSSO), 5—(4,5-Bis(2,4—
W0 2012/116452
dimethoxyphenyl)thiophen—2-yl)—lH-tetrazole (DNMOSSZ), 5—(4,5-Bis(2,6-
oxyphenyl)thiophen—2-yl)-1H—tetrazole (DNMOSSB), (2,2'-(5-(1H—tetrazoI—5-
y1)thiophene-2,3—diyl)bis(2,1-phenylene))dimethanol (DNMOSSS), 2,2’-(5-(1H—tetrazoI—5—
yl)thiophene-2,3—diyl)dibenza1dehyde (DNM0556), S—(4,5-Di(furan—3—yI)thiophen—2-yl)—
lH—tetrazole (DNM0557), 5-(4,5—Di(thiophen—3-yI)thiophen—2-yl)~1H—tetrazole
(DNMOSSS), 5-(4,5—Bis(2—(thiophen—3-y1)pheny1)thiophen—2—yl)-1H~tetrazole
(DNM0559), 5-(4,5~Bis(2-( furan~3—yl)phenyl)thiophen~2—yl)-1H—tetrazolc (DNMOS60),
-(4,5—Bis(2-chloro-4~methy1pheny1)thiophen—2~y1)—lH-tetrazole (DNM0563), 5-(4,5-
Bis(4—methoxy-3,5-dimethylphenyl)thiophen-Z-yl)-1H—tetrazole (DNM0564), 5-(4,5—
Bis(3~chloromethoxyphenyl)thiophen—2-yl)—lH—tetrazole 6S), Diethyl 3,3'-(5-
(1H—tetrazol-5—yl)thiophene~2,3-diy1)dibenzoate (DNM0593), 1,1 '-(3,3'-(5-(1H—tetrazol-
-y1)thiophene—2,3~diyl)bis(3,1-phenylene))dibutanone (DNM0599), Diethyl 5,5'-(5~
(1H~tetrazol~S-yl)thiophene-2,3-diyl)bis(3-hydroxybenzoate), 5-(4,5—Bis(3—
butylphenyl)thiophen—2—y1)—1H—tetrazole (DNM0608), 5—(4,5-bis(3—
(cyclopentylmethyl)phenyl)thiophen—2-y1)-lH—tetrazole (DNM0612), 5-(4-(4-Chloro—2—
methylphenyl)(4-methylnaphthalen—1-y1)thiophenyl)—1H—tetrazole (DNM0576), 5-
(4—(4-Chlorophenyl)(4-methy1naph’rhalen-1—yl)thiopheny1)—lH-tetrazole
(DNM0572), 5—(4—(5—Chlorophenyl)—4-(4-methy1naphthalen- I-y1)thiophenyl)-1H-
tetrazole CDNMOS75), 5—(4—(4—Fluorophenyl)-5—(4—(methylsu1fony1)phenyl)thiophen
yl)—1H—tetrazole (DNM0592), Ethyl 3—(2~(4~methylnaphthalen—1-yl)-S—(1H-tetrazol—S-
yl)thiophen—3-y1)benzoate 96), Ethyi 3—(2-(4-chloro~2-methylphenyI)—5—(1H—
oI-S—yl)thiopheny1)benzoate (DNM0597), s(4-chloromethylpheny1)
(1H-tetrazol~5—yl)thiazole (DNM0574), 4,5-Bis(5-chloromethylphenyl)—2-(1H—
tetrazoI-S—yl)thiazole (DNM0567), 4,5~Bis(3~chloro—4—met'hylphenyl)~2~(IH—tetrazol—S—
yl)thiazole (DNM0568), 4,5-Bis(4—methylnaphthalen—1—y1)—2-(1H-tetrazolyl)thiazole
(DNM0569), 4,5~Bis(4-chlorophenyl)—2-(1H-tetrazol—5-yi)thiazoie (DNM0573), 4,5-
Bis(4-fluoronaphthalen—1-y1)—2—(1H—tetrazolLS—ylfihiazoie (DNM0578), 4,5—Bis(4—
yl)-2~(1H—tetrazol~5-yl)thiazole (DNM0581), 4,5-Bis(4-t—butylphenyl)-2—(1H-
ol-S-yl)thiazole (DNM0582), 4,5-Bis(3,4—dimethy1phenyl)~2~(1H-tetrazol-S-
y1)thiazole (DNMOS 83), 4,5-Bis(4-chloro-2—isopropylphenyl)—2—( lH-tetrazol—S-
azole (DNM0584), 5-(5-(4-Chlorobenzy1)—4—(4—methy1naphthalen—1-y1)thiophen-2—
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yl)—1H~tetrazole (DNM0577), 5-(5-(4-Chlorobenzyl)-4—(4-chlorophenyl)thjopheny1)—1H—
tetrazole (DNM0579), 5-(5~(4-Chlorobenzyl)-4~(4-chloro~2-iso-
propylphenylfihiophenyl}1H-tetrazole SO), 5-(5-(4-Chlorobenzyl)—4-(4_
fluoronaphthalen—1—y1)thiophen—2-yl)-IH—tetrazole (DNM0587), S-(4—(Biphenylyl)—5—
(4—chlorobenzyi)thiophen-Z-yl)~lH-tetrazole (DNM0588), Ethyl 3-(2—(4-chlorobenzyl)—5-
(1H—tetrazol-S-yl)thiophen—3~yl)benzoate (DNM0595), 1-(3r(2-(4—Ch10robenzy1)—S-(1H-
tetrazol-S-yl)thiophen—3-y1)phenyl)butan—1-one (DNM0600), 5-(4—(3-Buty1phenyl)—5-(4-
chIorobenzyl)thiophen-2«yl)-1H—tetrazoie (DNM0606), Ethyl 3—(2—(4—chlorobenzyl)—5-
(1H—tetrazol—5-yl)thiophen—3-yl)hydroxybenzoate (DNM0609), 5-(5-(4-
Chlorobenzyl)~4~(3-(cyc1opentyhnethyl)phenyl)thiophen—2—yl)-1H—tetrazole (DNM06 1 0),
3-(2-(4—Chlorobenzyl)(1H-tetrazoi—S—y1)thiophen—3-yl)phcnol 1 3), 5—(5-(4-
benzyI)—4-(3—methoxyphenyl)thiophen-2~y1)~1I-I-tetrazole 15), 5-(5-(4—
Chlorobenzyl)~4—(3-butoxyphenyl)thiopheny1)— 1 H—tetrazole (DNM06 I 6), 5-(5—(4—
Chlorobenzyl)~4—(3-ethoxyphenyl)thiopheny1)-1H—tetrazole (DNM0617), 5-(5—(4-
benzyl)(3-propoxyphenyl)thiophen—2-yl)~1 H-tetrazole (DNM06 l 8), 5—(3 ,5-
Bis(4-methylnaphthalenyl)pheny1)~2H—tetrazole (DNM0461), 5~(2,5-Bis(4-
methylnaphthalen—l-y1)pheny1)-IH—tetrazole (DNM0446), 5-(2,5-Bis(4—chloro
methylphenyl)phenyl)-lH—tetrazole (DNM0447), 5—(3,5~Bis(4—chlorOpheny1)phenyl)—2H-
tetrazole (DNM0470), 5-(4'-Chloro~5-(4-methy1naphthalen—l—y1)biphenyl~3—y1)—1H—
tetrazole (DNM0480), 5-(3,5-Bis(4-fluoronaphthalen—1-y1)phenyl)-2H-tetrazole
(DNM0539), 4,5-Bis(4-ch10roisopropylphenyl)thiophene-Z—carboxylic acid
(DNM0566), 4,5-Bis(4-biphenyl)thiophene-Z-carboxylic acid (DNM0497), 4,5-Bis(4-
chlorophenyl)thiophene—2-carboxylic acid (DNM0498), 4,5-Bis(5-chloro-2—
methylphenyl)thiophene—2-carboxy1ic acid OI), 4,5—Bis(3—
chlorophenyl)thiophene-2~carboxylic acid (DNMOSOZ), 4,5—Bis(2,4—
ylphenyl)thiophene-2ncarboxylic acid (DNM0503), 4,5-Bis(4-chlor02-
methylphenyl)thiophene—2—carboxylic acid (DNM0561), S-(4,5—Bis(4—chloro—2—
isopropylphenyl)-3 -methylthiophen—2-yl)—lH-tetrazole (DNM0631), 5-(4,5-bis(4-chloro—
2~methylphenyl)methylthiophen—2-yl)-1H—tetrazole 14), 5—(4,5-Bis(4-
methylnaphthalen—l~y1)-3~methy1thiophenyl)-1H-tetrazole (DNM0620), 5-(4,5-Bis(3-
WO 16452
henyl)—3-methylthiophen—2—yl)-lH-tetrazole (DNM0627), and 5-(4,5-Bis(4~
fluoronaphthalen- l -yl)-3 lthiophen—2—yl)— l H—tetrazo1e (DNMO628).
According to an embodiment of the invention, a method of treatment of a
microbial ion is provided sing administering an effective amount of an
antimicrobial compound as bed herein to a patient in need thereof. Such a patient
may be, for example, a human or other mammal that is infected with a pathogenic
bacterium. In some embodiments, the microbial infection is substantially caused by
Gram-positive bacteria. In some embodiments, the microbial infection is substantially
caused by Enterococcus sp. In some embodiments, the microbial infection is
substantially caused by Staphylococcus sp. In some embodiments, the microbial
infection is substantially caused by Bacillus sp. In some embodiments, the microbial
ion is substantially caused by Staphylococcus epidermidis, Staphylococcus aureus
(including methicillin-resistant Staphylococcus aureus [MRSA]), Enterococcus sp.
(including vancomycin—resistant Enterococcus [VRE]), Streptococcus sp., or Bacillus sp.
To say that a microbial infection is “substantially caused” by a particular bacterium or
species thereof indicates that the given ial genus or species is thought to be
primau'ly responsible for the pathology, epidemiology, or symptom profile of the
microbial infection and does not rule out the presence of other ial species (e.g.,
benignly zing bacteria). In some embodiments, the microbial infection is skin and
skin structure infection of , wound infections, diabetic foot infections,
osteomyelitis, pneumonia, anthrax infection, impetigo or secondarily-acquired traumatic
lesions, gasteroenteritis, meningitis, pneumonia, gonorrhea, peptic ulcers, nosocomial
infections, or blood-stream infection, among others. In some embodiments, the described
antimicrobial agents are used as medicinal compounds, for example, for treating humans,
or as veterinary compounds, for e, for treating s, poultry, livestock and the
like, as well as in aquaculture and agricultural ations.
According to an embodiment ofthe invention, a method oftreatment of a
microbial infection is ed comprising administering an effective amount of an
antimicrobial adjuvant compound as described herein and an effective amount of an
antimicrobial nd to a patient in need thereof. Such a patient may be, for example,
a human or other mammal that is infected with a pathogenic bacterium. In some
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embodiments, the antimicrobial adjuvant compound is DNM0487. In some
embodiments, the antimicrobial adjuvant compound is DNM0488. In some
embodiments, the antimicrobial adjuvant compound is DNMOS48. In some
embodiments, the antimicrobial adjuvant compound is itself antimicrobial to some extent.
Thus combinations are possible, not only of compounds of the present invention with
each other, but also between a compound of the present invention and a known
antibacterial nd. In some embodiments, the microbial ion is skin and skin
structure infection of ulcers, wound infections, diabetic foot infections, osteomyelitis,
pneumonia, impetigo or secondarily-acquired traumatic lesions, gasteroenteritis,
meningitis, pneumonia, aemia, urinary tract infections, gonorrhea, peptic ulcers,
nosocomial infections, blood-stream infection, brucellosis, campylobacteriosis, Cat
Scratch fever, cholera, legionellosis, leptospirosis, Lyme disease, dosis, meningitis,
pertussis, plague, salmonellosis, shigellosis, is, tuiaremia, typhoid fever, or urinary
tract infection. An effective amount of one or more of the above—described
antimicrobials may be used in the preparation of a medicament as described above for the
treatment of a disease, disorder or condition caused by a pathogenic bacteria selected
from the group including but by no means limited to Escherichia, Salmonella,
Pseudomonas, Neisseria, Legionella, Haemophiius, Campylobacter, bacter and
In another ment ofthe invention, there is provided a method of
manufacturing a medicament for treating a microbial infection comprising admixing an
antimicrobial compound as described herein with a suitable cxcipient.
In other embodiments, there is provided the use of an antimicrobial compound as
described herein for ng a microbial infection.
In another embodiment of the invention, there is provided a method of
manufacturing a medicament for treating a ial infection comprising admixing an
antimicrobial adjuvant as described herein with a suitable antimicrobial compound.
In other embodiments, there is ed the use of an antimicrobial adjuvant as
described herein for treating a microbial infection. In some embodiments, the
antimicrobial adjuvant is used with or coadministered with an antimicrobial compound.
WO 16452
According to an embodiment, a pharmaceutical composition is ed
comprising a compound ofthe present invention and a pharmaceutically acceptable
excipient.
The microbial infection may be substantially caused by one or more Gram—
positive ia.
The microbial infection may se a Staphylococcal infection.
The microbial infection may comprise Enterococcal infection.
The microbial ion may comprise Bacillus infection.
The microbial infection may besubstantially caused by a bacterial species selected
from the group ting of Staphylococcus aureus, Staphylococcus epidermidis,
Enterococcus is, Enterococcus faecium, Bacillus cereus, and Streptococcus sp.
Alternatively, the microbial infection is substantially caused by Gram—negative
bacteria.
The microbial ion may be crobial.
The microbial infection may be substantially caused by Pseudomonas aeruginosa.
The antimicrobial adjuvant compound may be selected from the group consisting
ofDNMO487, DNM0488, and DNM0548.
It is of note that the antimicrobials or antimicrobial adjuvants may be prepared to
be administered in a variety of ways, for example, topically, orally, intravenously,
intramuscularly, subcutaneously, intraperitoneally, asally or by local or systemic
intravascular infusion using means known in the art and as discussed below. Compounds
ofthe present invention may be used, for example, to treat infections caused by Gram
negative bacteria such as E. 0011' and/or Gram positive bacteria such as .S'. aureus. In
some embodiments, compounds have antimicrobial effects against antibiotic-resistant
strains such as, for example, methicillin—resistant S. aureus (MRSA). In some
embodiments, compounds have antimicrobial effects against Mycobacterium
tuberculosis.
The crobial or antimicrobial adjuvant compounds may be arranged to be
delivered at a tration of about 1 nM to about 50 mM; or 10 nM to about 50 mM; or
100 nM to about SOmM; or 1 M to about 50 mM; or 10 uM to 50 mM or 100 uM to 50
mM. As will be appreciated by one of skill in the art, this may be the “effective amoun ,”
that is, a sufficient dosage is administered such that a concentration within one of the
envisioned ranges is attained at the required site. In some antimicrobial embodiments, the
effective amount will be informed at least in part by the minimum inhibitory
concentration of the compound required to t bacteriostatic or bacteriocidal effects
against the en of st. In some antimicrobial adjuvant embodiments, the
effective amount will be informed at least in part by the approximate minimum
concentration required to produce the desired adjuvant effect with a ermined
known antibiotic against the pathogen of interest. In some embodiments, the effective
amount will be calibrated so as to produce a serum level ofover ten times the MIC, or
over five times the MIC, or over three times the MIC, or at the MIC in a subject suffering
from an infection. In some ments, the effective amount will be calibrated so as to
produce an in situ concentration of over ten times the MIC, or over five time the MIC, or
over time times the MIC, or at the MIC.
An effective amount of one of the compounds of the invention can be employed
in pure form or, where such forms exist, in pharmaceutically able salt form.
Alternatively, the compound can be administered as a ceutical compositiOn
containing the compound of interest in combination with one or more pharmaceutically
acceptable carriers. It will be understood, however, that the total daily usage ofthe
compounds and compositions ofthe invention will be decided by the attending physician
within the scope of sound medical judgment. The specific ive dose level for any
ular patient will depend upon a variety offactors including the disorder being
treated and the severity of the disorder; activity of the specific compound employed; the
specific composition employed; the age, body weight, general health, sex and diet of the
patient; the time of administration, route of administration, and rate of excretion of the
specific compound employed; the duration of the treatment; the risk/benefit ratio; drugs
used in combination or coincidental with the specific compound employed; and like
factors well known in the medical arts. For example, it is well within the skill ofthe art to
start doses of the compound at levels lower than required to e the desired
therapeutic effect and to lly increase the dosage until the desired effect is achieved.
The total daily dose of the compounds of the present invention as administered to
a human or lower animal may range from about 0.0003 to about 30 mg/kg ofbody
weight. For purposes of oral administration, more preferable doses can be in the range of
from about 0.0003 to about 1 mg/kg body weight. If desired, the effective daily dose can
be divided into multiple doses for es of administration; consequently, single dose
compositions may n such amounts or submultiples f to make up the daily
close. For oral administration, the compositions of the invention are ably provided
in the form oftablets ning about 1.0, about 5.0, about 10.0, about 15.0, about 25.0,
about 50.0, about 100, about 250, or about 500 milligrams of the active ingredient.
For best results, whether a particular compound is antimicrobial or an
antimicrobial adjuvant with respect to the pathogen of interest (and in the case of
adjuvants, with respect to the antimicrobial compound being used) would lly be
ascertained by a number of microbiological methods known in the art, including for
e, the methods disclosed in the Examples. It is well understood in the art that
while every “antimicrobial” compound has an antimicrobial effect against at least one
pathogen at one or more effective amounts, antimicrobial compounds vary as to their
spectrum and/or potency of activity. Moreover, while every “antimicrobial adjuvant”
nd has an adjuvant effect in conjunction with at least one antimicrobial
compound against at least one pathogen at one or more effective s ofboth
crobial compound and adjuvant, antimicrobial nt compounds vary as to their
spectrum, potency of activity, and/or compatibility with particular antimicrobial
compounds. As will be apparent to one knowledgeable in the art, the total dosage will
vary according to many factors, including but by no means limited to the weight, age and
condition of the individual or patient.
In some embodiments, one or more of the crobial compounds may be cc—
administered with one or more known antibiotics. In some embodiments, one or more of
the antimicrobial adjuvant compounds my be co-administered with one or more
antimicrobial compounds; in which case the total effective amount of antimicrobial
compound may be less than would otherwise be required in the absence of antimicrobial
adjuvant, e.g. ~8 times less, or ~16 times less, or ~32 times less, or ~64 times less, or
~125 times less, or ~250 times less. in some embodiments, the antimicrobial adjuvant
compounds are not themselves antimicrobial. In some embodiments, the antimicrobial
adjuvant compounds are themselves antimicrobial. In some embodiments, one or more
W0 2012/116452
of the antimicrobial adjuvant compounds may be combined with one or more
antimicrobial compounds in a single dosage form. In some embodiments, the
antimicrobial compound is an antimicrobial compound ofthe t invention. In some
embodiments, the crobial compound is a known antimicrobial compound such as,
for example, almecillin, amdinocillin, amikacin, amoxicillin, amphomycin, amphotericin
B, llin, azacitidine, azaserine, azithromycin, azlociilin, aztreonam, sinin,
allopurinol, amicacin, aminoglycosides, amphotericin B, ampicillin, ansamycins,
anthracyclines, antimycotics, azithromycin, bacampiciliin, bacitracin, benzyl penicilloylpoiylysine
, bleomycin, din A, butoconazole, candicidin, capreomycin, carbenicillin,
cefacior, cefadroxil, cefamandole, cefazoline, cefdinir, cefepime, cefixime, oxime,
cefinetazole, zime, cefonicid, cefoperazone, ceforanide, cefotaxime, cefotetan,
cefotiam, cefoxitin, cefpiramide, cefpodoxime, cefprozil, cefsuiodin, cefiazidime,
cefiibuten, ceftizoxime, ceftriaxone, cefuroxime, cephacetrile, cephalexin, cephaloglycin,
cephaloridine, cephalothin, irin, cephradine, chloramphenicoi, cilastatin,
cinnamycin, ciprofloxacin, clarithromycin, clavulanic acid, clindamycin, inol,
cloxacillin, colistimethate, colistin, cyclacillin, cycloserine, cyclospon'ne, (Leu-
Pro), camptothecin, cefataxime, cephalexin, cephaiosporins, chalcomycin, chartreusin,
chlorotetracyciines, thricin, chrymutasins, chrysomicin M, chrysomicin V,
clomocyclines, dactinomycin, dalbavancin, dalfopristin, ycin, daunorubicin,
demeclocycline, detorubicin, dicloxacillin, dihydrostreptomycin, dirithromycin,
doxorubicin, doxycycline, ellipticines, eisamicin, epirubicin, erythromycin,
eveminomycin, filipins, fluconazoles, fungichromins, fusidic acid, floxacillin,
fosfomycin, gentamycin, gilvocarin, fulvin, viridin, guamecyclines,
gemifloxacin, gramicidin, hetacillin, icin, imipenem, an, ivermectin,
ilosamides, itraconazoles, kanamycin, laspartomycin, linezolid, loracarbef, lankamycin,
lincomycin, magainin, meclocycline, meropenem, methacycline, mezlocillin,
minocycline, mitomycin, moenomycin, moxalactam, moxifloxacin, enolic acid,
macrolides, methicillins, mitoxantrone, nafcillin, cin, neomycin, netilmicin,
niphimycin, nitrofurantoin, ocin, nalidixic acid, norfloxin, nystatin, nystatins,
ofloxacin, oieanomycin, oxytetracyline, paromomycin, penicillamine, phenethicillin,
piperacillin, plicamycin, pristinamycin, peciiocin, penicillins, pesticides, phosphomycin,
W0 2012/116452
pimarcin, siinycin, polyenes, polymyxin B, polymyxin E, quinupristin, quinolones,
ravidomycin, reserpines, rifamycin, ristocetins A and B, rifabutin, in, rifamycin,
rolitetmcycline, sisomycin, spiramycin, spironolactone, sulfacetamide sodium,
sulphonamide, spectrinornycin, streptomycin, streptozocin, sulbactam, sultamicillin,
tacrolimus, tazobactam, lanin, teiithromycin, cins, tetracyclines,
thiamphenicols, thiolutins, tobramycin, tyrothricin, ticarcillin, tigecycline, tobramycin,
troleandomycin, tunicamycin, tyrthricin, vancomycin, vidarabine, Viomycin,
virginiamycin, and wortmannins; the presence of a plural item in the foregoing list
g to refer to one or more members of a family of antibiotics known in the art by
that name. Which compound or compounds should be co-administered or compounded
in combination with compounds ofthe present invention depends on a number of factors,
including but not necessarily limited to the efficacy ofthe agent or agents in the absence
of antimicrobial adjuvant compounds, the ism of action ofthe compound(s), the
identity of the pathogen causing or potentiating the sick ion, and/or the severity of
the sick condition in the subject.
The pharmaceutical compositions can be formulated for oral administration in
solid or liquid form, for parenteral intravenous, subcutaneous, uscular,
eritoneal, intra—arterial, or ermal injection, for or for vaginal, nasal, topical, or
rectal administration. Pharmaceutical compositions of the present iOn suitable for
Oral administration can be presented as discrete dosage forms, e.g., tablets, chewable
tablets, caplets, capsules, liquids, and flavored . Such dosage forms n
predetermined amounts of active ingredients, and may be prepared by methods of
pharmaCy well known to those skilled in the mt. See generally, ton's
Pharmaceutical Sciences, 18th ed., Mack Publishing, Easton Pa. (1990).
Parenteral dosage forms can be administered to ts by various routes
including subcutaneous, intravenous (including bolus injection), intramuscular, and
rterial. Because their administration typically bypasses patients' natural defenses
against contaminants, parenteral dosage forms are specifically sterile or capable of being
sterilized prior to administration to a patient. Examples ofparenteral dosage forms
include solutions ready for injection, dry products ready to be dissolved or suspended in a
pharmaceutically acceptable vehicle for injection, suspensions ready for injection, and
ons. Pharmaceutical compositions for parenteral injection comprise
pharrnaceutically acceptable sterile aqueous or nonaqueous solutions, dispersions,
suspensions or emulsions and sterile powders for reconstitution into sterile injectable
solutions or dispersions. Examples of suitable s and nonaqueous rs, ts,
solvents or vehicles include water, ethanol, polyols (propylene glycol, hylene
glycol, glycerol, and the like, and suitable mixtures thereof), vegetable oils (such as olive
oil) and injectable organic esters such as ethyl oleate, or suitable mixtures thereof.
Suitable fluidity ofthe composition may be maintained, for e, by the use of a
coating such as in, by the maintenance ofthe required particle size in the case of
diSpersions, and by the use of surfactants. These itions may also contain
adjuvants such as preservative agents, wetting agents, emulsifying agents, and dispersing
agents. Prevention ofthe action ofmicroorganisms may be ensured by various
antibacterial and anfifiingal agents, for example, parabens, butanol, phenol, sorbic
acid, and the like. It may also be desirable to e isotonic agents, for example, sugars,
sodium chloride and the like. Prolonged absorption of the injectable pharmaceutical form
may be brought about by the use of agents delaying absorption, for example, aluminum
monostearate and gelatin.
In some cases, in order to prolong the effect of a drug, it is often desirable to slow
the absorption of the drug from subcutaneous or intramuscular injection. This may be
lished by the use of a liquid suspension of crystalline or amorphous material with
poor water solubility. The rate of absorption of the drug then depends up0n its rate of
dissolution which, in turn, may depend upon crystal size and crystalline form.
Alternatively, delayed absorption of a parenterally administered drug form is
lished by dissolving or ding the drug in an oil vehicle.
Suspensions, in addition to the active compounds, may contain suspending agents,
for example, ethoxylated isostearyl alcohols, polyoxyethyiene sorbitol and sorbitan
esters, microcrystalline cellulose, aluminum metahydroxide, bentonite, agar-agar,
tragacanth, and mixtures f. If desired, and for more effective distribution, the
compounds ofthe invention can be incorporated into slow-release or targeted—delivery
systems such as r matrices, liposomes, and microspheres. They may be sterilized,
for example, by ion through a bacteria-retaining filter or by incorporation of
W0 2012/116452
sterilizing agents in the form of sterile solid compositions, which may be dissolved in
sterile water or some other sterile injectable medium ately before use.
Injectable depot forms are made by g microencapsulated matrices of the
drug in biodegradable polymers such as polylactide-polyglycolide. ing upon the
ratio of drug to polymer and the nature of the particular polymer employed, the rate of
drug e can be controlled. es of other biodegradable polymers include
poly(orthoesters) and poly(anhydrides). Depot injectable formulations also are prepared
by entrapping the drug in liposomes or microemulsions which are ible with body
tissues. The injectable formulations can be sterilized, for example, by filtration through a
ial-retaining filter or by incorporating sterilizing agents in the form of sterile solid
compositions which can be dissolved or dispersed in sterile water or other sterile
injectable medium just prior to use.
Injectable preparations, for e, sterile injectable aqueous or nous
suspensions may be formulated according to the known art using suitable dispersing or
wetting agents and suspending agents. The sterile injectable preparation may also be a
sterile able solution, suspension or emulsion in a nontoxic, parenterally acceptable
diluent or solvent such as a solution in 1,3-butanedioi. Among the acceptable vehicles
and solvents that may be employed are water, Ringer's solution, U.S.P. and isotonic
sodium chloride on. In on, sterile, fixed oils are conventionally employed as a
solVent or suspending medium. For this purpose any bland fixed oil can be employed
including synthetic mono- or diglycerides. In addition, fatty acids such as oleic acid are
used in the preparation of injectables.
Solid dosage forms for oral administration include capsules, tablets, pills,
powders, and granules. In such solid dosage forms, one or more compounds of the
invention is mixed with at least one inert pharmaceutically acceptable carrier such as
sodium e or iurn phosPhate and/or a) fillers or extenders such as starches,
lactose, sucrose, glucose, mannitol, and salicylic acid; b) binders such as
carboxymethylcellulose, alginates, gelatin, polyvinylpyrrolidinone, e, and acacia;
c) humectants such as glycerol; d) disintegrating agents such as agar-agar, calcium
carbonate, potato or tapioca starch, alginic acid, certain silicates, and sodium carbonate;
e) solution retarding agents such as paraffin; t) absorption accelerators such as quaternary
W0 2012/116452
ammonium compounds; g) wetting agents such as cetyl alcohol and glycerol
monostearate; h) absorbents such as kaolin and bentonite clay; and i) lubricants such as
talc, calcium stearate, magnesium stearate, solid polyethylene glycols, sodium lauryl
sulfate, and es thereof. In the case of capsules, tablets and pills, the dosage form
may also se buffering agents.
Solid compositions of a similar type may also be employed as fillers in soft and
hard-filled gelatin capsules using lactose or milk sugar as well as high molecular weight
polyethylene glycols. The solid dosage forms of tablets, dragees, capsules, pills, and
granules can be prepared with coatings and shells such as enteric coatings and other
coatings well known in the pharmaceutical formulating art. They may optionally contain
opacifying agents and can also be of a compositiou that they release the active
ingredient(s) only, or preferentially, in a certain part of the intestinal tract in a delayed
. Examples of materials which can be useful for delaying release of the active
agent can include polymeric substances and waxes.
Dosage forms for topical administration may include s, sprays, ointments
and inhalants. A compound of the present ion can be mixed under sterile conditions
with a pharmaceutically acceptable carrier and any needed preservatives, buffers or
propellants which may be required. Opthalmic formulations, eye ointments, powders and
solutions are plated as being within the scope of this invention. Aqueous liquid
compositions comprising compounds ofthe invention also are contemplated.
Liquid dosage forms for oral administration include ceutically acceptable
emulsions, microemulsions, solutions, sions, syrups and elixirs. In addition to the
active compounds, the liquid dosage forms may n inert diluents commonly used in
the art such as, for example, water or other solvents, solubilizing agents and emulsifiers
such as ethyl alcohol, isopmpyl alcohol, ethyl carbonate, ethyl acetate, benzyl alcohol,
benzyl benzoate, propylene , 1,3-butylene , dimethylformamide, oils (in
particular, cottonseed, nut, corn, germ, olive, castor, and sesame oils), glycerol,
tetrahydrofurfuryl alcohol, polyethylene glycols and fatty acid esters of an, and
mixtures thereof.
Besides inert diluents, the oral compositions can also include adjuvants such as
wetting agents, emulsifying and suspending , sweetening, flavoring, and perfuming
agents. Dosage forms for topical or transdermal administration of a compound of this
invention include ointments, pastes, creams, lotions, gels, powders, solutions, ,
inhalants or patches. A desired compound ofthe invention is admixed under sterile
conditions with a pharmaceutically acceptable r and any needed vatives or
buffers as may be required. Ophthalmic formulation, ear drops, eye ointments, powders
and solutions are also contemplated as being within the scope of this invention. The
ointments, , creams and gels may contain, in addition to an active nd of this
invention, animal and vegetable fats, oils, waxes, paraffins, starch, tragacanth, cellulose
derivatives, polyethylene glycols, silicones, bentonites, silicic acid, talc and zinc oxide, or
mixtures thereof.
Powders and sprays can contain, in addition to the nds of this invention,
lactose, talc, silicic acid, aluminum hydroxide, calcium silicates and ide powder,
or ‘es of these substances. Sprays can additionally contain customary propellants
such as chlorofluorohydrocarbons.
nds ofthe invention may also be administered in the form of liposomes.
As is known in the art, liposomes are generally derived from phospholipids or other lipid
substances. Liposomes are formed by mono-- or lamellar hydrated liquid crystals
that are dispersed in an aqueous medium. Any non-toxic, physiologically acceptable and
metabolizable lipid capable of forming liposomes may be used. The present cempositions
in liposome form may contain, in on to the compounds of the invention, stabilizers,
preservatives, and the like. The preferred lipids are the natural and synthetic
phospholipids and phosphatidylcholines hins) used separately or together. Methods
to form liposomes are known in the art. See, for example, Prescott, Ed, Methods in Cell
Biology, Volume XIV, Academic Press, New York, N.Y., (1976), p 33 et seq.
In some embodiments, one or more of the antimicrobials or antimicrobial
adjuvants at concentrations or dosages discussed above may be combined with a
pharmaceutically or pharmacologically acceptable r, ent or diluent, either
biodegradable or non-biodegradable. Exemplary es of carriers include, but are by
no means limited to, for example, poly(ethylene~vinyl acetate), copolymers of lactic acid
and glycolic acid, poly(lactic acid), gelatin, collagen matrices, polysaccharides, poly(D,L
lactide), poly(malic acid), poly(caprolactone), celluloses, albumin, starch, casein, dextran,
wo 2012/116452 2012/050130
polyesters, ethanol, mathacrylate, polyurethane, polyethylene, vinyl polymers, glycols,
mixtures thereof and the like. Standard excipients include n, casein, lecithin, gum
acacia, cholesterol, tragacanth, c acid, benzalkonium chloride, calcium stearate,
yl monostearate, cetostearyl alcohol, crogol emulsifying wax, sorbitan
, polyoxyethylene alkyl , polyoxyethylene castor oil derivatives,
polyoxyethylene sorbitan fatty acid esters, polyethylene glycols, polyoxyethylene
stearates, colloidol silicon dioxide, phosphates, sodium dodecylsulfate,
carboxymethylcellulose calcium, ymethylcellulose sodium, methylcellulose,
hydroxyethylcellulose, hydroxypropylcellulose, hydroxypropylmethycellulose phthalate,
noncrystalline cellulose, magnesium aluminum silicate, triethanolamine, polyvinyl
alcohol, polyvinylpyrrolidone, sugars and es.
As will be apparent to one dgeable in the art, specific carriers and carrier
combinations known in the art may be selected based on their preperties and release
characteristics in view of the intended use. Specifically, the carrier may be pH-sensitive,
thermo—sensitive, thermo~gelling, arranged for sustained release or a quick burst. In some
embodiments, rs of different classes may be used in combination for multiple
effects, for example, a quick burst followed by sustained release.
In other embodiments, one or more of the antimicrobials or crobial
adjuvants at coucentrations or dosages described above may be encapsulated for delivery.
Specifically, the compounds may be encapsulated in biodegradable microspheres,
microcapsules, microparticles, or nanospheres. The delivery vehicles may be composed
of, for example, hyaluronic acid, polyethylene glycol, poly(lactic acid), gelatin, poly(E-
caprolactone), or a poly(lactic-glycolic) acid polymer. Combinations may also be used,
as, for example, gelatin nanospheres may be coated with a polymer of poly(lactic~
glycolic) acid. As will be apparent to one knowledgeable in the art, these and other
suitable delivery vehicles may be prepared according to protocols known in the art and
utilized for delivery of the compounds.
It is of note that the above described antimicrobials may be combined with
permeation enhancers known in the art for improving ry. Examples of permeation
enhancers include, but are by no means limited to those compounds described in US. Pat.
Nos. 3,472,931; 3,527,864; 3,896,238; 256; 3,952,099; 4,046,886; 4,130,643;
4,130,667; 4,299,826; 4,335,115; 4,343,798; 4,379,454; 4,405,616; 4,746,515; 4,788,062;
4,820,720; 4,863,73 8; 970; and 5,378,730; British Pat. No. 1,011,949; and Idson,
1975, J. Pharm. Sci. —924.
A “pharmaceutically acceptable salt” includes a salt that retains the desired
biological activity of the parent antimicrobial or antimicrobial adjuvant compound and
does not impart any undesired toxicological effects. es of such salts are salts of
acids such as hydrochloric acid, hydrobromic acid, sulfuric acid, phosphoric acid, nitric
acid, and the like; acetic acid, oxalic acid, tartaric acid, succinic acid, malic acid, benzoic
acid, pamoic acid, alginic acid, methanesulfonic acid, naphthalenesulfonic acid, and the
like. Also included are salts of cations such as sodium, potassium, lithium, zinc, c0pper,
barium, bismuth, calcium, and the like; or organic s such as trialkylammonium.
Combinations of the above salts are also useful. It is to be understood that a compound
disclosed herein in a salt-free form and analogous compound in a phannaceutically
acceptable salt form are both compounds of the t invention. Additionally,
gs, e.g. esters of the compounds disclosed herein, are compounds ofthe present
invention. The preparation and use of acid on salts, carboxylate salts, amino acid
additiOn salts, and zwitterion salts of compOunds ofthe present inventiOn may also be
considered pharmaceutically acceptable ifthey are, within the scope of sound medical
nt, le for use in contact with the tissues ofhumans and lower animals
without undue toxicity, irritation, allergic response, and the like, are commensurate with a
reasonable benefit/risk ratio, and are effective for their intended use. Such salts may also
include various es and hydrates ofthe compound of the present invention.
In some embodiments, the bed antimicrobial compounds used as medicinal
compounds, for example, for treating humans, or as veterinary compounds, for example,
for treating animals, poultry, livestock and the like, as well as in aquaculture and
agricultural ations.
While various embodiments ofthe invention have been described above, it will be
recognized and understood that modifications may be made therein, and the appended
claims are ed to cover all such modifications which may fall within the spirit and
scope ofthe invention.
Certain embodiments ofthe invention will now be illustrated using examples.
W0 2012/116452
Example 1
Synthesis ofDNM0488 and analogues
NBS :91N
U c:
TFA+HZSO4 / \ “2
ON Br
3 3
wrong,
PMPP
diamhala-rfizcos ”he" NINSW1213:”his:IFHN—N
4,5-Dibromothiophenecarboxamide Thiophene—Z—carbonitrile (3.27 g, 30.0
mmol) was dissolved in a mixture of H2804 (10 mL) and TFA (20 mL). NBS (11.75 g,
66.0 mmol) was added in portion in 20 min. After complete addition, the reaction
mixture was further stirred for 4h, and then poured onto 200 g of crushed ice. A white
solid was formed, which was collected, washed with water, and dried together with
orous pentoxide under vacuum to afford 8.50 g (99 %) of product.
bromothiophene-Z-carbonitrile An oven-dried round-bottomed flask was
charged with bromofl1i0phenecarboxamide (4.28g, 15.0 mmol) and 20 mL of
DMF under an argon here. The solution was cooled on an ice—water bath, and
cyauuric chloride (1.81 g, 9.8 mmol) was then added in one portion. After stirring at 0 °C
for 1 h, the reaction mixture was warmed to room temperature, and stirred for a further
3h. 100 mL ofwater was added. A white solid was formed, which was collected through
suction ion, washed with water, and dried together with phosphorous pentoxide
under vacuum to afford 3.70 g (92 %) ofproduct.
4,5-Bis(4-chloromethylpheny1)thiophenc—Z-carbonitrile A round-bottomed
flask was charged with 4,5-dibromothi0phene»2—carbonitrile (534 mg, 2.00 11111101), 4-
chloro~2~methylphenylboronic acid (818 mg, 4.80 mmol) and Pd(PPh3)4 (136 mg, 0.10
mmol). After degassed, dioxane (10 mL) and aqueous sodium carbonate (5 mL, 2M, 10
mmol) was added. The reaction mixture was heated to 90 °C. The ss of the reaction
was monitored by TLC. After the reaction was te, 50 mL of water was added, and
the reaction mixture was extracted with ethyl acetate. The organic phase was dried over
anhydrous sodium sulphate and then coucentrated. The residue was purified by flash
ch-ornatography (hexane: CH2C12 = 2: 1). 0.60 g (84 %) of product was obtained as clear
oil.
—(4,5-Bis(4—chloromethylphenyl)thiophenyl)—1H-tetrazole (DNM0488)
A round-bottomed flask was charged with 4,5-bis(4-chloromethylphenyl)thi0phene—2-
carbonitriie (600 mg, 1.67 mmol), zinc bromide (945 mg, 4.20 mmol) and sodium azide
(273 mg, 4.20 mmol). After degassed, DMF (5 mL) was added. The reaction mixture was
heated to 110 °C and stirred at this temperature until complete. The reaction was cooled
to rt, and 30 mL of 0.1 N aqueous HCi was added. The reaction mixture was extracted
with ethyl acetate. The organic phase was dried over anhydrous sodium te and then
concentrated. The e was purified by flash tography (hexane: EtOAc: AcOH
= 30: 10: 1). 603 mg (90 %) uct was obtained as a white solid, 1H NMR (DMSO,
500 MHz) 5 7.82 (s, 1H), 7.36 (d, J= 2.04 Hz, 1H), 7.34 (d, J= 1.94 Hz, 1H), 7.31 (d, J
= 8.25 Hz, 1H), 7.28 (dd, J1= 8.26 Hz, J2 = 1.99 Hz, 1H), 7.17 (dd, J1= 8.20 Hz, J2 =
2.05 Hz, 1H), 7.02 (d, J= 8.28 Hz, 1H), 2.17 (s, 3H), 2.03 (5,311); 13c NMR (DMSO,
WO 16452
125 MHZ)8140.58, 139.14, 139.12, 138.19, 133.59, 133.39, , 132.47, 131.71,
131.17, 130.57, 130.17, 130.11, 126.00, 125.80, 19.69, 19.57.
The following compounds were also prepared using an analogous method:
-(4,5—Bis(4—methylnaphthalen-l-yl)thiophen-Z—yI)—1H-tetrazole (DNM0486)
1H NMR (DMSO, 500 MHZ.) 6 8.00 (d, J= 8.49 Hz, 1H), 7.98 - 7.90 (m, 3H), 7.88 (d, J
= 8.49 Hz, 1H), 7.57
- 7.50 (m, 2H), 7.50 — 7.42 (m, 2H), 7.33 (t, J= 7.47 Hz, 1H), 7.29
(d, J2 7.36 Hz, 1H), 7.19 (d, J= 7.22 Hz, 1H), 7.13 (d, J= 7.22 Hz, 1H), 2.57 (s, 3H),
2.52 (s, 3H); l3C NMR (DMSO, 125 MHz) 6 , 135.65, 134.20, 132.18, 132.13,
131.98, 131.68, 131.30, 130.95, 129.21, 127.85, 127.50, 126.30, 126.22, , 125.95,
125.89, 125.81, 125.75, , 124.50, 19.07, 18.97.
-(4,5-Bis(4-ch10rophenyl)thiophen-2—yl)—1H-tetrazole (DNM0487) IH NMR
(DMSO, 500 MHz) 5 7.90 (s, 1H), 7.50 — 7.45 (111,411), 7.38 - 7.31 (m, 4H); ”c NMR
(DMSO, 125 MHz) 5 140.14, 137.85, , , 132.63, 131.58, 131.15, 130.74,
130.54, 129.19, 128.94, 124.74.
-(4,5-Di(biphenyI-Z-yl)thiophenyl)-1H—tetrazole (DNM0489) 1H NMR
(DMSO, 500 MHz).8 7.48 (s, 1H), 7.35 (td, J; = 7.55 Hz, J2 = 1.00 Hz, 1H), 7.30 (td, J;
m 7.55 Hz, J2 = 1.00 Hz, 1H), 7.21 — 7.03 (m, 10H), 6.72 - 6.65 (m, 2H), 6.65 - 6.58 (m,
3H), 6.55 (d, J: 7.45 Hz, 111); 13C NMR (DMSO, 125 MHz) 8 141.91, 140.83, 140.46,
140.19, 139.33, , 132.02, 131.21, 130.32, 130.23, 130.20, 129.88, 128.63, 128.46,
128.45, 127.95, 127.88, 127.70, 127.45, 127.34, 126.61, 126.34.
-(4,5—Bis(3—chloromethylphenyl)thiophen-2—y1)-lH-tetrazole (DNM0504)
lH NMR (DMSO, 500 MHZ) 5 7.89 (s, 1H), 7.41 (d, J: 1.70 Hz, 1H), 7.39 (d, J= 1.75
Hz, 1H), 7.37 (d, J= 8.05 Hz, 1H), 7.35 (d, J= 8.00 Hz, 1H), 7.18 (dd, J; = 7.85 HZ, J2 =
1.80 Hz, 1H), 7.12 (dd, J, = 7.83 Hz, J2 = 1.73 Hz, 1H), 2.34 (s, 6H); 130 NMR (DMSO,
125 MHz)8139.77, , 136.19, 135.06, 134.02, , 133.55, 131.80, 131.68,
, 131.54, 128.79, 128.69, ,127.43,19.38, 19.32.
S-(4,S-Bis(S—chloro-Z-methylphenyl)thiophenyl)-1H-tetrazole 08)
]H NMR (DMSO, 500 MHz) 8 7.84 (s, 1H), 7.41 (d, J= 2.25 Hz, 1H), 7.36 (dd, J, = 8.23
Hz, J2 = 2.28 Hz, 1H), 7.31 - 7.23 (m, 3H), 7.11 (s, 1H), 2.13 (s, 3H), 2.01 (s, 3H); 13C
NMR(DMSO, 125 MHz) 8 140.36, 139.01, 136.27, 135.74, 134.71,133.43, 132.26,
132.23, 131.07, 130.59, 130.15, 130.01,129.56, 128.95, 19.26, 19.16.
-(4,S-Bis(3,4-dimethylphenyl)thiophenyl)-1H—tetrazole (DNM0509) 1H
NMR (DMSO, 500 MHz) 8 7.84 (s, 1H), 7.21 (s, 1H), 7.19 (s, 1H), 7.12 — 7.06 (m, 2H),
6.98 (dd, J, = 8.28 Hz, J2 a 1.63 Hz, 1H), 6.94 (dd, J, = 7.67 Hz, J2 = 1.48 Hz, 1H), 2.22
(s, 6H), 2.20 (s, 3H), 2.19 (s, 3H); 13C NMR (DMSO, 125 MHz) 8 141.17, 138.26,
136.90, 136.80,136.57, 135.65, 132.51, 131.95, 130.14, 129.86, 129.68, 129.65,129.54,
126.21, 126.06, 19.41, 19.33,19.14, 19.11.
-(4,5-Bis(4-isopr0pylphenyl)thiophenyl)-lH—tetrazole (DNM0512) ]H
NMR (DMSO, 500 MHz) 8 7.84 (s, 1H), 7.30 - 7.23 (m, 8H), 2.90 (8613, J= 6.88 Hz,
1H), 1.24 - 1.18 (m, 12H); 13C NMR (DMSO, 125 MHZ)5148.87, 147.77, 141.11,
138.25, 132.48, 132.01, 130.15, 128.75, 128.55, 126.93, 126.67, 33.11, 33.08, 23.76,
23.65.
-(4,S-Bis(2-methylphenyl)thiophen—Z-yl)-1H-tetrazole (DNM0531) 1H NMR
(DMSO, 500 MHz) 8 7.81 (s, 1H), 7.33 - 7.16 (m, 6H), 7.02 (t, J= 7.35 Hz, 1H), 7.02 (t,
J= 7.44 Hz, 1H), 2.16 (s, 3H), 2.02 (s, 3H); 130 NMR (DMSO, 125 MHz) 8 141.77,
WO 16452
140.03, 136.57, 135.51, 134.73, 131.87, 131.48, 131.26,130.42, 130.39, 130.10, 128.93,
127.89, 125.89, 125.72, 19.91, 19.75.
~(4,S-Bis(2-isopropylphenyl)thiophen-2—yl)—lH—tetrazole 34) 1H
NMR (CDC13, 500 MHz) 8 7.75 (s, 1H), 7.29 — 7.19 (m, 5H), 7.14 — 7.08 (m, 1H), 7.07 ~
7.00 (m, 2H), 3.10 - 2.95 (m, 2H), 1.04 (s, 6H), 0.95 (d, J= 6.80 Hz, 6H); 13c NMR
(CDC13, 125 MHz) 6 148.48, 147.51, , 132.28, 131.09, 129.46, 128.43, ,
126.15, 125.72, 125.66, 30.36, 10.15, 24.46.
-(4,5—Bis(2—phenoxyphenyl)thiophen-2—yl)—1H—tetrazole (DNM0536) 1H NMR
(DMSO, 500 MHz) 5 7.91 (s, 1H), 7.39 - 7.22 (m, 8H), 7.16 - 7.05 (m, 4H), 6.79 (d, J =
7.90 Hz, 1H), 6.75 (d, J: 7.65 Hz, 1H), 6.66 - 6.61 (m, 4H); ”c NMR (DMSO, 125
MHz)5155.83, 155.76, 154.04, 153.87, 138.02, 136.48, 131.75, ,131.33, 130.42,
129.91, 129.86, 129.50, 126.43, 124.08, 123.68, 123.64, 123.46, , 118.95, 118.70,
118.37,117.81.
-(4,5-Bis(4-fluoronaphthalen—1-yl)thiophen—2—yl)-1H-tetrazole (DNM0537)
IH NMR (DMSO, 500 MHz) 6 8.05 — 7.95 (m, 4H), 7.85 (d, J= 8.50 Hz, 1H), 7.66 — 7.56
(m, 3H), 7.53 (t, J= 7.53 Hz, 1H), 7.40 (t, J= 7.55 Hz, 1H), 7.34 - 7.26 (m, 2H), 7.15
(dd, J17» 10.55 Hz, J2 a 8.00 Hz, 1H); 13C NMR (DMSO, 125 MHz) 5 159.20, 158.48,
157.19, 156.48, 140.42, 139.24, 132.83, 132.79, 132.44, 132.40, 132.00, , 129.84,
128.92, 128.89, 127.97, 127.90, 127.80, 127.75, 127.02, 126.85, 125.89, 125.85, 125.53,
125.51, 125.41, , 122.86, 122.75, 122.73, 122.62, 120.25, 120.23, , 120.19,
109.42, 109.28, 109.26, 109.12.
S-(4,5-Bis(2-chlorophenyl)thiophenyl)-1H-tetrazole (DNM0538) 1H NMR
(CDC13, 500 MHZ) 5 8.07 (s, 1H), 7.36 (d, J= 8.05 Hz, 1H), 7.31 (d, J= 7.91 Hz, 1H),
W0 2012/116452
7.29 - 7.22 (m, 2H), 7.18 (dt,J1 = 1.06 Hz, J; = 7.50 Hz, 1H), 7.15 — 7.09 (m, 1H), 7.08 -
7.01 (m, 2H); 13C NMR (CDC13, 125 MHz) 5 142.02, 139.64, 134.55, 134.27, 133.64,
133.21, 132.59, 132.11, 131.78, 130.56,130.40, 130.23, 129.57, , ,124.30.
-(4,5-Bis(2—ethylphenyl)thi0phenyl)-lI-I-tetrazole (DNM0541) lH NMR
(DMSO, 500 MHz) 5 7.77 (s, 1H), 7.33 - 7.20 (m, 5H), 7.17 (t, J= 7.43 Hz, 1H), 7.08
(dt, J, = 1.10 Hz, J2 = 7.33 Hz, 1H), 7.03 (d, J= 7.50 Hz, 1H), 2.50 (q, J= 7.50 Hz, 2H),
2.43 (q, J= 7.50 Hz, 2H), 1.06 (1,.1= 7.50 Hz, 3H), 0.96 (1, J= 7.50 Hz, 3H); 13(2 NMR
(DMSO, 125 MHz) 5 142.74, , 141.58,139.90, 134.00, 131.53, 131.48, 130.97,
130.33, 129.16, 128.69, 128.45, 128.11, 125.71, 125.56, 123.74, 25.51, 25.38, 15.09,
.01.
-(4,5-Bis(dibenz0 [b,d]furanyl)thiophen—Z-yl)-1H—tetrazole (DNM0542) 1H
NMR (DMSO, 500 MHz) 5 8.26 (s, 1H), 8.15 - 8.07 (m, 3H), 8.04 (dd, J, = 7.63 Hz, J2 =
0.98 Hz, 1H), 7.50 — 7.40 (m, 4H), 7.40 -7.34 (m, 2H), 7.34 — 7.22 (m, 4H), ”C NMR
(DMSO, 125 MHz)5155.30, 155.22,152.65, 152.36, 137.03, 135.52, 131.54, 128.15,
, 127.75,127.68, 124.22, 124.05, ,123.34, 123.20, 123.16, 123.12, 121.82,
121.36, ,120.90, 119.86, 117.22,111.38, 111.25.
-(4,5-Di(benzofuran-Z—yl)thi0phen~2~yl)—1H—tetrazole (DNM0543) 1H NMR
(DMSO, 500 MHz) 5 8.23 (s, 1H), 7.74 (d, J= 7.75 Hz, 2H), 7.67 (1, J= 7.28 Hz, 2H),
7.49 (s, 1H), 7.45 - 7.37 (m, 3H), 7.33 (dt, J; = 2.20 Hz, J; = 7.40 Hz, 2H); 13C NMR
(DMSO, 125 MHz) 5 154.12, 153.91, 149.67, 147.67,130.34, 130.05, 128.48, 128.36,
128.21, 125.92, 125.38, 123.75, 123.53,121.93, 121.68, 111.27,111.26, 107.06, 106.01.
-(4,S—Bis(2-methoxyphenyl)thiophenyl)~lH-tetrazole (DNM0544) 1H NMR
(DMSO, 500 MHZ) 8 7.82 (s, 1H), 7.35 - 7.28 (m, 2H), 7.10 (dd, J1= 7.55 Hz, J2 = 1.50
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Hz, 1H), 7.04 (d, J= 8.35 Hz, 2H), 6.98 (dd, J, = 7.50 Hz, J; = 1.35 Hz, 1H), 6.90 _ 6.80
(m, 2H), 3.62 (s, 3H), 3.59 (s, 3H); 13C NMR (DMSO, 125 MHz) 5 156.29, 156.25,
138.75, 137.01, 131.72, 130.91, 130.30, 130.09, 129.16, 124.59, 121.73, 120.37, 120.29,
111.85, 111.60, 55.28, 55.22.
—(4,5—Bis(2,3-dimethoxyphenyl)thiophen—2-yl)-1H-tetrazole (DNM0545) lH
NMR (DMSO, 500 MHz) 8 7.82 (s, 1H), 7.03 (dt, .1; = 1.20 Hz, J; = 8.00 Hz, 2H), 6.98
(d, J = 7.70 Hz, 1H), 6.94 (d, J = 8.00 Hz, 1H), 6.67 (dd, J; = 7.75 Hz, J2 = 1.40 Hz, 1H),
6.63 (dd, J, = 7.58 Hz, J; = 1.58 Hz, 1H), 3.82 (s, 6H), 3.63 (s, 3H), 3.57 (s, 3H); 13C
NMR (DMSO, 125 MHz) 5 152.73, 146.13, 146.07, 138.01, 136.68, 131.51, 129.53,
126.64, 123.88, 122.59, 122.43, , 112.63, 60.12, 59.96, 55.72, 55.67.
—(4,5—Bis(4-tert~butylphenyl)tl1iophen~2-yl)-lH-tetrazole 46) 1H
NMR (DMSO, 500 MHz) 6 7.84 (s, 1H), 7.53 - 7.37 (m, 4H), 7.30 (d, J = 8.41 Hz, 2H),
7.27 (d, J= 8.41 Hz, 2H), 1.29 (s, 9H), 1.28 (s, 9H); 13C NMR GDMSO, 125 MHz) 5
151.15, 150.07, , 132.17, 132.12, 129.84, 128.46, 128.28, 125.80, 125.53, 34.46,
34.37, 31.09, 30.99.
-(4,5-Bis(4-chloro—2-iso-propylphenyl)thiophen-2—yl)-1H-tetrazole
(DNM0548) 1H NMR (DMSO, 500 MHz) 5 7.75 (s, 1H), 7.43 - 7.39 (m, 2H), 7.31 -
7.26 (m, 2H), 7.30 (dd, J; = 2.24 Hz, J2 = 8.30 Hz, 1H), 7.06 (d, J= 8.30 Hz, 1H), 2.97 —
2.82 (m, 2H), 1.04 (broad, 6H), 0.95 (d, J = 6.80 HZ, 6H); 13C NMR (DMSO, 125 MHz)
8 150.00, 149.20,140.39, 138.88, 134.47, , 133.30, 132.20, 131.71, ,
128.76, 126.16, , 125.97, 125.76, 29.95, 29.77, 23.54 (broad).
-(4,5-Bis(2-(trifluoromethyl)phenyl)thiophen-2—yl)-1H-tetrazole (DNM0549)
1H NMR (DMSO, 500 MHZ) 5 7.88 - 7.78 (m, 3H), 7.66 - 7.58 (m, 2H), 7.56 - 7.49 (m,
2H), 7.41 (broad, 1H), 7.23 - 7.15 (m, 1H); l3c NMR (DMSO, 125 MHz) 8
-(4,5-Bis(2—(trifluoromethoxy)phenyl)thiophen-Z-y1)-1H-tetrazole
(DNMOSSO) 1H NMR (DMSO, 500 MHZ) 6 7.90 (s, 1H), 7.57 - 7.51 (m, 1H), 7.51 —
7.46 (m, 1H), 7.45 — 7.34 (m, 5H), 7.32 (dd, J; = 7.50 Hz, J2 = 1.70 Hz, 1H); 13C NMR
(DMSO, 125 MHz) 8 145.44, 136.94, 135.8, 132.48, 131.7, 131.17, 130.98, 130.22,
127.82, 127.62, 127.4, 125.37, 120.88, 120.54, 118.85, 118.81.
—(4,5-Bis(2,4-dimethoxyphenyl)thiophen-Z-yl)~1H—tetrazole (DNMOSSZ) IH
NMR (DMSO, 500 MHz) 5 7.75 (s, 1H), 6.99 (d, J= 8.45 Hz, 1H), 6.87 (d, J= 8.45 Hz,
1H), 6.64 — 6.58 (m, 2H), 6.46 (dd, J1= 8.50 Hz, J; = 2.25 Hz, 1H), 6.43 (dd, J1= 8.50
Hz, J; = 2.25 Hz, 1H), 3.764 (s, 3H), 3.756 (s, 3H), 3.66 (s, 3H), 3.65 (s, 3H); 13(3 NMR
(DMSO, 125 MHZ) 5 , 160.13, 157.52, 157.46, 138.46, 136.36, 131.91, 131.62,
, , 114.29, 105.25, 104.89, 98.82, 98.79, 55.49, 55.40, 55.29, 55.19.
-(4,S-Bis(2,6—dimethoxyphenyl)thiophen-Z—yl)—1H-tetrazoie (DNM0553) 1H
NMR (DMSO, 500 MHz) 8 7.68 (s, 1H), 7.22 (t, J= 8.38 HZ, 1H), 7.16 (d, J= 8.33 Hz,
1H), 6.57 (d, J= 8.40 Hz, 2H), 6.55 (d, J= 8.35 HZ, 1H), 3.49 (s, 6H), 3.47 (s, 6H); 13C
NMR (DMSO, 125 MHZ) 8 157.67, 157.29, 134.19, 132.23, 130.01, 128.89, ,
110.53,103.80, 103.73, 55.26, 55.10.
(2,2'-(5-(lH-tetrazol-S-yl)thiophene-Z,3-diyl)bis(2,1—phenylene))dimethanol
(DNMDSSS) 1H NMR (DMSO, 500 MHZ) 8 7.85 (s, 1H), 7.51 (d, J= 7.60 Hz, 1H), 7.48
(d, J= 7.70 Hz, 1H), 7.37 (dt, J1= 1.47 Hz, J3 = 7.45 Hz, 1H), 7.33 ~ 7.21 (m, 3H), 7.13
(dt, .1; = 1.00 Hz, J2 = 7.49 HZ, 1H), 7.02 (dd, J,- = 1.00 Hz, J2 = 7.60 Hz, 1H), 4.36 (s,
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2H), 4.23 (s, 2H); 13C NMR (DMSO, 125 MHz) 5 141.19, 140.84, 140.12, 139.48,
133.01, 131.45, 131.19, 130.04, 129.89, 128.87, 127.85, 127.65, ,126.65, 126.59,
60.71, 60.44.
2,2'-(S-(lH-tetrazol—S-yl)thiophene-Z,3—diyl)dibenzaldehyde (DNM0556) iH
NMR(CDC13, 500 MHz) 5 9.91 (s, 1H), 9.80 (s, 1H), 7.93 (s, 1H), 7.75 (d, J= 7.80 Hz,
2H), 7.59 (dt, J, = 1.35 Hz, J; = 7.55 Hz, 1H), 7.49 - 7.41 (m, 3H), 7.34 (t, J= 7.53 Hz,
1H), 7.18 (d, J: 7.50 Hz, 1H); 13C NMR(CDC13, 125 MHz) 5 192.30, 191.20, 153.22,
140.91, 139.47,137.51, 134.79, 134.72, , 134.40,134.04, 133.00, 132.44,132.21,
130.28, , ,129.32, 126.53.
-(4,5-Di(furanyl)thiophen-Z-yl)—1H~tetrazole (DNM0557) ]H NMR
(DMSO, 500 MHz) 5 8.03 (dd, J, = 0.93 Hz, J, = 1.38 Hz, 1H), 7.93 (dd, J, = 0.90 Hz, J;
= 1.30 Hz, 1H), 7.87 (s, 1H), 7.83 (14,]; 1.60 Hz, 1H), 7.77 (t, J= 1.70 Hz, 1H), 6.63
(dd, J, = 0.83 Hz, J2 = 1.83 Hz, 1H), 6.59 (dd, J, ~—~ 0.80 Hz, J2 = 1.80 Hz, 1H); 13(3 NMR
(DMSO, 125 MHz) 5 144.46,143.86, 141.52, 140.76, 131.73, 130.93, 130.30, 119.66,
, 110.91, 110.38.
-(4,5-Di(thi0phen—3—yl)thiophen-2—yl)-1H—tetrazole (DNMOSSS) ‘H NMR
(DMSO, 500 MHz) 5 7.89 (s, 1H), 7.68 (dd, J, = 1.33 Hz, J, = 2.88 Hz, 1H), 7.65 (dd, J,
= 2.95 Hz, J2 = 4.95 Hz, 1H), 7.61 (dd, J, = 2.95 Hz, J, = 4.90 Hz, 1H), 7.59 (dd, J, =
1.28 Hz, J2 = 2.88 Hz, 1H), 7.03 (dd, J, = 1.18 Hz, J2 a 4.93 Hz, 1H); 13C NMR (DMSO,
125 MH2)813S.88, 135.23, 133.66, 132.73, 131.40, 127.61,127.59, 127.52, 126.80,
125.14,123.88.
-(4,5-Bis(2-(thiophenyl)phenyl)thiophen—2—yl)—lH-tetrazole (DNM0559)
1H NMR (DMSO, 500 MHz) 5 7.65 (s, 1H), 7.40 — 7.35 (m, 2H), 7.32 (dt, J, = 1.15 Hz,
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J; = 7.51 Hz, 1H), 7.29 - 7.23 (m, 3H), 7.16 - 7.00 (m, 2H), 6.90 (dd, J; = 1.23 Hz, J2 a
2.88 Hz, 1H), 6.85 (dd, J1= 1.23 Hz, J2 = 2.88 Hz, 1H), 6.73 (d, J= 7.65 Hz, 1H), 6.64
(d, J= 7.65 Hz, 1H), 6.58 (dd, J} = 1.20 Hz, J2 : 4.95 Hz, 1H), 6.53 (dd, J]: 1.20 Hz, J;
24.95 Hz, 1H); l3CNMR (DMSO, 125 MHz) 5 142.01, 140.99, 140.62, 139.74, 135.76,
135.02, 132.86, 131.72, 130.96, , 129.91, 129.73, 129.37, 128.68, 127.94, ,
127.73,'127.16, 127.06, 125.56, 125.39, 123.16, 122.78.
-(4,5—Bis(2-( furanyl)pheny1)thiophen—Z-yl)-1H-tetrazole (DNM0560) 1H
NMR (DMSO, 500 MHz) 5 7.61 (s, 1H), 7.59 - 7.56 (m, 2H), 7.38 - 7.31 (m, 3H), 7.30 -
7.25 (m, 2H), 7.25 - 7.22 (m, 1H), 7.19 — 7.14 (m, 1H), 7.12 ((11, J; = 1.30 Hz, J; = 7.58
Hz, 1H), 6.96 (d, J= 7.54 Hz, 1H), 6.85 (dd, J; = 0.95 Hz, J2 = 7.66 Hz, 1H), 6.20 (dd, J;
= 0.83 Hz, J2 = 1.78 Hz, 1H), 6.12 (dd, .71 = 0.80 Hz, J2 = 1.75 Hz, 1H); 130 NMR
(DMSO, 125 MHZ) 5 142.01, 140.99, 140.62, 139.74, 135.76, , 132.86, 131.72,
130.96, 130.16, 129.91, 129.73, 129.37, 128.68, 127.94, 127.81, 127.73,127.16,127.06,
125.56, 125.39, , 122.78.
-(4,5—Bis(2-chloromethylphenyl)thiophen-Z—yl)—1H—tetrazole (DNM0563)
1H NMR (DMSO, 500 MHz) 5 7.85 (s, 1H), 7.36 - 7.32 (m, 2H), 7.29 (d, J= 7.80 Hz,
1H), 7.06 (d, J= 7.74 Hz, 1H), 7.09-7.02 (m, 2H), 2.30 (s, 3H), 2.28 (s, SE); 13C NMR
(DMSO, 125 MHz)6141.00, 139.73, , 132.59, 132.54, 131.88, 131.38, ,
130.57, 130.19, 130.03, 128.06, 127.87, 127.82, 20.39, 10.37.
-(4,5-Bis(4-methoxy-3,S-dimethylphenyl)thiophenyl)—lH—tetrazole
(DNM0564) 1H NMR (DMSO, 500 MHz) 8 7.83 (s, 1H), 7.03 (s, 2H), 6.99 (5, 21-1), 3.67
(s, 6H), 2.172 (s, 6H), 2.166 (s, 6H); ”C NMR (DMSO, 125 MHz) 8 156.89, 156.12,
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140.69, 137.89, 131.78, 130.86, 130.45, 130.27, 129.19, 128.99, 127.91, 59.43, 59.42,
.78, 15.74.
-(4,5—Bis(3-chloromethoxyphenyl)thiophen—2—yl)—1H—tetrazoie
65) IH NMR (DMSO, 500 MHz) 5 7.87 (s, 1H), 7.41 (d, J= 2.05 Hz, 1H), 7.39
(d, J= 2.00 Hz, 1H), 7.30 (dd, J1= 2.15 Hz, J2 = 8.65 Hz, 1H), 7.22 (dd, J; = 2.08 Hz, J;
= 8.58 Hz, 1H), 7.20 (d, J= 8.70 Hz, 1H), 7.17 (d, J= 8.65 Hz, 1H), 3.89 (s, 3H), 3.88 (s,
3H); l3C NMR (DMSO, 125 MHz) 8 172.03, , 154.03, 139.42, 136.95, 131.63,
, 129.84, 129.19, 128.70, 127.88, 125.48, 121.39, 121.18, 113.24, 113.01, 56.29,
56.18.
Diethyl 3,3’-(5—(1H—tetrazol-S-y1)thiophene-2,3-d1yl)dibenzoate (DNM0593)
lH NMR (CDC13, 500 MHZ) 5 8.17 (s, 1H), 8.14 (s, 1H), 8.06 (s, 1H), 8.03 (d, J= 7.75
Hz, 1H), 7.98 (d, J= 7.75 Hz, 1H), 7.48 (d, J= 7.90 Hz, 1H), 7.44 - 7.37 (m, 3H), 7.34 (t,
J= 7.75 Hz, 1H), 4.44 - 4.35 (m, 4H), 1.42 — 1.35 (m, 6H); 13C NMR , 125 MHz)
167.33, 166.35, , 138.70, 135.47, 133.75, 133.73, 133.17, 132.49, 131.28,
131.27, , 130.44, 130.20, 129.85, 129.20, 128.99, 128.97, 124.48, 61.88, 61.64,
14.39.
1,1'—(3,3'-(5-(1H—tetrazol-S-ylfihiophene—2,3-diyl)bis(3,1-phenylene))dibutan-
1-0ne(DNM0599) lH NMR(CDC13, 500 MHz) 5 8.13 (s, 1H), 8.08 (s, 1H), 7.98 — 7.89
(m, 3H), 7.54 (d, J= 7.80 Hz, 1H), 7.46 (t, J= 7.60 Hz, 1H), 7.40 (t, J= 7.70 Hz, 1H),
2.94 (t, J"—' 7.28 Hz, 2H), 2.85 (t, J= 7.30 Hz, 2H), 1.80 — 1.67 (m, 4H), 0.99 (t, J: 7.35
Hz, 3H), 0.98 (t, J= 7.35 Hz, 3H); 13C NMR (CDC13, 125 MHz) 5 200.52, 139.04,
137.96, 137.80, 136.06, 134.09, 134.00, 133.71, 132.47, 129.80, 129.51, 129.44, 129.04,
128.58, 128.04, 41.20, 41.06, 18.23, 18.18, 14.28.
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Diethyl 5,5‘-(S-(1H—tetrazol-S—yl)thiophene-Zfi—diyl)bis(3-hydroxybenzoate)
(DNM0607) 1H NMR (DMSO, 500 MHz) 5 10.12 (s, 1H), 9.99 (s, 1H), 7.87 (s, 1H),
7.43 — 7.29 (m, 4H), 6.97 (s, 1H), 6.93 (s, 1H), 4.35 - 4.17 (m, 4H), 1.33 — 1.20 (m, 6H);
13C NMR (DMSO, 125 MHZ) 5 , 165.07, 157.89, , 139.98, 138.09, 136.36,
133.97,131.78,131.60,131.02,120.17,120.10,120.01,115.86, 115.11, 60.91, 60.81,
14.07, 14.00.
—(4,5—Bis(3—butylphenyl)thiophen-Z-yl)-IH-tetrazole (DNM0608) 1H NMR
(CDClg, 500 MHz) 6 7.44 (s, 1H), 6.91 — 6.56 (m, 8H), 8.06 (s, 1H), 2.31 - 2.05 (m, 4H),
1.29 — 1.16 (m, 4H), 1.16 — 1.00 (m, 4H), 0.81 - 0.67 (m, 6H); 13C NMR (CDC13, 125
MHz) 5 142.80, 142.62, 139.91, 138.91, 136.26,134.07,129.86, 129.58, 129.54, 128.54,
127.63, 127.02, 126.88, 126.61, 35.70, 35.68, 33.79, 33.68, 22.66, 22.63, 14.33.
-(4,5-bis(3-(cyclopcntylmethyl)phenyl)thiophen-Z-yl)~1H-tetrazole
(DNM0612) II-I NMR (CDC13, 500 MHz) 5 8.00 (s, 1H), 7.24 - 7.17 (m, 2H), 7.17 - 7.09
(m, 4H), 7.09 - 7.04 (m, 2H), 2.54 - 2.48 (m, 4H), 2.00 — 1.87 (111, 21-1), 1.69 — 1.54 (m,
8H), 1.54 — 1.41 (m, 4H), 1.17 - 1.00 (m, 4H); 131: NMR (CDC13, 125 MHz) 5 152.34,
144.09, 143.03, 142.82, 139.94, , 133.02, 132.94, 129.97, 129.77, 129.12, ,
128.57, 128.14, 126.76, 126.41, 122.42, 42.08, 41.99, 32.56, 25.06.
Example 2
sis of DNM0576 and analogues
Br Br
sz(dba)3, man-1),, KF Pd,(dba),. P(B 11-03. KF
Br CN ”1 N
dioxanc S dioxanc
flNaNJ, mar, ”2.2—- / N
DMF. Ar1
An CN If
HN"‘N
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4-Bromo-S—(4—methylnaphthalen-l-yl)thiophene—2—carbonitrile Around-
bottomed flask was charged with 4,S—dibromothiophene-Z—carbonitrile (536
mg, 2.00
mmol), 4—methylnaphthalen—I-ylboronic acid (409 mg, 2.20 mmol), Pd2(dba)3 (18.3 mg,
0.020 mmol) and KF (383 mg, 6.60). After degassed, e (5 mL) and P(Bu—t)3 (0.24
mL, 0.2M, 0.048 mmol) was added. The reaction mixture was stirred at rt until te.
mL of water was added, and the reaction mixture was extracted with ethyl acetate. The
organic phase was dried over anhydrous sodium sulphate and then concentrated. The
residue was purified by flash chromatography (hexane: CHZClz = 3: l). 0.58 g (88 %) of
product was obtained as a white solid.
4—(4~Chloromethylphenyl)(4-methylnaphthalen-l-yl)thiophene—2—
carbonitrile A round—bottomed flask was charged with 4-bromo—5-(4-
methylnaphthalen—l-yl)thiophene—2—carbonitrile (203 mg, 0.62 mmol), ro
methylphenylboronic acid (119 mg, 0.70 mmol), Pd2(dba)3 (9.2 mg, 0.010 mmol) and KF
(126 mg, 2.17). After degassed, dioxane (2.0 mL) and P(Bu—t)3 (0.15 mL, 0.2M, 0.03
mmol) was added. The reaction mixture was stirred at rt until complete. 20 mL of water
was added, and the on mixture was extracted with ethyl e. The organic phase
was dried over anhydrous sodium sulphate and then concentrated. The residue was
purified by flash tography (hexane: CH2C12 = 3: 1). 0.21 g (90.6 %) of product
was obtained as a white solid.
-(4—(4-Chloromethylphenyl)(4-methylnaphthalen-l-yl)thiophen-2—yl)-
1H-tetrazole (DNM0576) A round-bottomed flask was charged with 4-(4—ehloro~2—
methylphenyi)-5—(4-methylnaphthalen—l-y1)thiophenecarbonitrile (209 mg, 0.56
mmol), zinc bromide (338 mg, 1.50 mmol) and sodium azide (97.5 mg, 1.50 mmol).
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After degassed, DMF (3 mL) was added. The reaction mixture was heated to 110 °C and
stirred at this temperature until complete. The on was cooled to rt, and 30 mL of 0.1
N aqueous HCl was added. The reaction e was extracted with ethyl acetate. The
organic phase was dried over anhydrous sodium sulphate and then concentrated. The
residue was purified by flash chromatography (hexane: EtOAc: AcOH = 30: 10: 1). 196
mg (84 %) of product was obtained as a white solid, 1H NMR (DMSO, 500 MHz) 5 8.03
(d, J74 8.40 Hz, 1H), 7.88 (s, 1H), 7.80 (d, J= 8.05 Hz, 1H), 7.55 (t, J= 7.68 Hz, 1H),
7.48 (t, J: 7.65 Hz, 1H), 7.45 (d, J= 7.19 Hz, 1H), 7.37(d, J= 7.30 Hz, 1H), 7.23 (d, J‘2
1.95 Hz, 1H), 7.09 (d, J= 8.25 Hz, 1H), 7.04 (dd, J1= 8.25 Hz, J; = 2.06 Hz, 1H), 2.65
(s, 3H), 2.17 (s, 3H); 13C NMR (DMSO, 125 MHz) 6 172.05, 141.01, 139.65, 138.35,
, 133.73, 132.18,132.10,131.64, ,131.26,129.80, 129.23, 127.62, 126.45,
126.26, 126.02, 125.53, 125.51, 124.67, 21.08, 19.82.
The following compounds were also ed using an analogous method:
-(4-(4-Chlorophenyl)—5—(4—methylnaphthalen—1—y1)thi0phen—2~yl)—1H~
tetrazole (DNM05‘72) 1H NMR (CDC13, 500 MHz) 5 8.09 (d, J= 8.39 Hz, 1H), 7.84 (s,
1H), 7.82 (d, J= 8.46 Hz, 1H), 7.56 (t, J= 7.32 Hz, 1H), 7.44 (t, J= 7.84 Hz, 1H), 7.31
(d, J= 7.25 Hz, 1H), 7.2301, J= 7.24 Hz, 1H), 7.17—7.09 (m, 4H), 2.76 (s, 311); ”c NMR
(CDCI3, 125 MHz) 6 152.64, 142.65, 138.24, 135.00, 134.09, 133.65, , 132.16,
131.91, 131.87, 129.76, 128.93, 127.95, 126.54, 126.37, 126.30, 126.11, 124.78, ,
19.80.
—(4—(5-Chlor0phenyl)—4—(4-methylnaphthalen—l-yl)thiophen-2—yl)—1H—
tetrazole (DNM0575) 1H NMR (DMSO, 500 MHz) 8 8.11 (s, 1H), 8.09 (d, J= 8.44 Hz,
1H), 7.65 (d, J= 8.11 Hz, 1H), 7.58 — 7.53 (111,211), 7.49 - 7.42 (m, 2H), 7.28 — 7.20 (m,
W0 2012/116452
4H), 2.72 (s, 3H); ”C NMR (DMSO, 125 MHz) 5 139.74, 139.15, 136.18, 133.66,
132.29, 132.15, 131.14, 130.40, 129.40, 129.23,128.61, 127.69, 126.69, 126.36, 126.28,
125.47,124.77, 19.23.
4-Fluorophenyl)-5—(4—(methylsulfonyl)phenyl)thi0phen-2—yl)—1H-
tetrazole (DNM0592) 1H NMR (DMSO, 500 MHz) 5 7.96 (s, 1H), 7.94 (d, J= 8.45 Hz,
2H), 7.57 (d, J= 8.45 Hz, 2H), 7.45 _ 7.38 (m, 2H), 7.28 (t, J: 8.80 Hz, 2H), 3.27 (s,
3H); l3c NMR(DMSO, 125 MHz) 5 , , 141.61, 139.83, 139.71, 137.14,
131.45,131.38,131.32, 129.58, 129.42, , 128.42,127.46, 124.88,116.37, 116.19,
43.36.
Ethyl 3—(2-(4-methylnththalen-1—yl)-5—(1H-tetrazol-S-yl)thiophen
yl)benzoate (DNM0596) 1H NMR (01301;, 500 MHz) 5 8.00 (d, J= 8.40 Hz, 1H), 7.96
(1, J= 1.64 Hz, 1H), 7.87 (s, 1H), 7.83 (dt, J; = 7.85 Hz, .72 = 1.35 Hz, 1H), 7.73 (d, J:
8.36 Hz, 1H), 7.35 (1, J= 7.60 Hz, 1H), 7.28 (d, J= 7.79 Hz, 1H), 7.22(d, J= 7.74 Hz,
1H), 7.17 (d, J= 7.10 Hz, 1H), 7.14 (1, J2 7.85 Hz, 1H), 4.24 (q, J= 7.07 Hz, 2H), 2.68
(s, 3H), 1.24 (t, J= 7.15 Hz, 3H); 13C NMR (CDC13, 125 MHz) 6166.77, 143.43, 138.88,
135.13, 134.17, 133.51, 133.05, ,132.03, 131.41,130.72, 129.59,129.31,128.91,
127.95,126.46, 126.36, 126.14, 124.71, 123.55, 61.60, 19.76, 14.21.
Ethyl 3-(2—(4-chloro—2—methylphenyl)—5—(lH-tetrazol—S-yl)thiophen
yl)benzoate (DNM0597) 1H NMR (CD013, 500 MHz) 5 8.01 — 7.95 (m, 2H), 7.78 (s,
1H), 7.41 = 8.22 Hz, J2 = 1.50 Hz, 1H), 7.14 (d,
— 7.33 (m, 2H), 7.23 (s, 1H), 7.19 (dd, J,
J= 8.22 Hz, 1H), 4.38 (q, J= 7.15 Hz, 2H), 2.04 (s, 3H), 1.40 (t, J= 7.14 Hz, 3H); 131:
NMR (CDC13, 125 MHz) 5166.58, 142.77, 138.62, 138.53, 134.15, , 133.52,
132.76, 132.50, 131.59, , , 129.59, 129.35, 129.24, 126.57, 124.34, 61.74,
.16, 14.39.
Example 3
Synthesis ofDNM0574 and analogues
/ l) ammo] N ArB(Gl-l)z
ska; / )
Br 2)McOH ”(WW4"“2003
s dioxanc + H10 C)mAcOH+NaOAc
4,5—Dibromothiazole To a solution of 2,4,5-triibromothiazole (3.12 g, 9.67
mmol) in anhydrous THF (25 mL) was added i-PngCl (4.84 mL, 2M in THF, 9.67
mmol) at ice-sait bath temperature under argon. After te addition, the on was
stiired for 1h at ice-salt bath temperature, and then quenched with methanol (2 mL). The
reaction was worked up with a typical procedure, and the crude product was purified by
flash chromatography (30 % ofDCM in hexane) to afford 1.45 g of product.
4,5-Bis(4-chloro-Z-methylphenyl)thiazole A round-bottomed flask was
charged with 4,5-dibromothiazole (160 mg, 0.66 mmoi), ro-2—methylphenylboronic
acid (269 mg, 1.58 rnmol) and Pd(PPh3)4 (38.1 mg, 0.033 mmol). Afier degassed,
dioxane (5 mL) and aqueous sodium carbonate (3 mL, 2M, 6 mmol) was added. The
reaction mixture was heated to 90 °C. The progress of the on was monitored by
TLC. After the reaction was complete, 50 mL of water was added, and the reaction
mixture was extracted with ethyl acetate. The organic phase was dried over anhydrous
sodium sulphate and then trated. The residue was purified by flash
chromatography to afford 170 mg ofproduct as clear oil.
Z-Bromo—4,S-bis(4-ch10ro-Z-methylphenyl)thiazole A solution of 4,5—Bis(4-
chloro-2—methy1phenyl)thiazole (170 mg, 0.51 mmol), NBS (100 mg, 0.56 mmol) and
NaOAc (82 mg, 1.0 mmol ) in AeOH (5 mL) and DCM (3 mL) was stirred overnight at
rt, and then quenched with water (25 mL) and extracted with ethyl acetate. The organic
phase was dried over anhydrous sodium sulphate and then concentrated. The residue was
purified by flash chromatography to afford 196 mg of product.
4,5-Bis(4-chloromethylphenyl)thiazole—Z—carbonitrile A round~bottomed
flask was charged with 2—Bromo—4,5~bis(4-chloromethylphenyl)thiazola (196 mg, 0.47
mmol) and CuCN (84.2 mg, 0.94 mmol). After degassed, 3 mL ofDMF was added. The
reaction mixture was heated to 150 °C ght. After cooled to room temperature, the
reaction was quenched with 25 mL of water, and extracted with ethyl acetate. The
organic phase was dried over anhydrous sodium sulphate and then concentrated. The
residue was purified by flash chromatography to afford 150 mg of t.
4,5—Bis(4—chloro—2—methylphenyl)—2-(lH-tetrazoI—S-yl)thiazole (DNM0574) A
round-bottomed flask was charged with 4,5-bis(4-chloromethylphenyl)thiazole—2—
itrile (150 mg, 0.42 mmol), zinc bromide (189 mg, 0.84 mmol) and sodium azide
(45.5 mg, 0.84 mmol). After degassed, DMF (3 mL) was added. The reaction e
was heated to 150 °C overnight. After cooled to rt, the reaction was quenched with 30
mL of 0.1 N aqueous HCl, and extracted with ethyl e. The organic phase was dried
over anhydrous sodium sulphate and then concentrated. The residue was purified by flash
tography (hexane: EtOAc: AcOH = 30: 10: l). 120 mg of product was obtained as
a white solid, lH NMR (DMSO, 500 MHz) 8 7.93 (d, J= 8.41 Hz, 11-1), 7.57 (d, J= 1.90
Hz, 1H), 7.49 - 7.44 (m, 2H), 7.33 — 7.28 (m, 2H), 2.63 (s, 3H), 2.18 (s, 3H); ”C NMR
(DMSO, 125 MHz) 5 166.07, 153.61, 139.50,138.74,134.92, 133.48, 132.53, 131.87,
131.42, 130.27, 129.98, 126.64, 125.67, 21.13, 19.51.
The following compounds were also prepared using an analogous method:
4,5~Bis(5-chloromethylpheny1)(1H—tetrazol—S-yl)thiazole (DNM0567)
1H NMR (DMSO, 500 MHz) 5 7.95 (d, J= 2.17 Hz, 1H), 7.54 (dd, J; = 8.25 Hz, J2 =
1.80 Hz, 11-1), 7.48 (d, J»?- 8.25 Hz, 1H), 7.45 (dd, J; = 8.23 Hz, J2 = 2.33 Hz, 1H), 7.41 —
7.36 (111, 21-1), 2.61 (s, 3H), 2.11 (s, 3H); 13C NMR (DMSO, 125 MHz) 5 165.31, 152.99,
, 135.54, 135.31, 133.72, 133.07, 132.04, 130.99, 130.09, 129.94, 129.64, 128.79,
128.72, 20.82, 19.03.
4,5-Bis(3—chloromethylphenyl)(1H-tetrazol-S—yl)thiazole (DNM0568)
1H NMR (DMSO, 500 MHz) 8 8.09 (d, J= 1.30 Hz, 1H), 7.92 (dd, J; = 7.93 Hz, J; =
1.38 Hz, 1H), 7.79 (d, J= 1.20 Hz, 1H), 7.57 - 7.50 (m, 2H), 7.43 (d, J= 7.95 Hz, 1H),
2.42 (8, 31-1), 2.39 (5, 31-1); 13(3 NMR (DMSO, 125 MHz) 5 166.30, 153.18, ,
136.51, 134.29, 133.22, 132.68, 132.20, 131.49, 131.20, 129.01, 127.53, 126.22, 125.36,
19.68, 19.50.
4,5-Bis(4-methylnaphthalen—l—yl)—2—(1H-tetrazol—S-yl)thiazole (DNM0569)
1H NMR (DMSO, 500 MHz) 8 9.99 (d, J= 7.91 Hz, 1H), 8.16 (t, Jfi 9.52 Hz, 2H), 8.04
(d, J= 7.35 Hz, 1H), 7.86 (d, J= 8.41 Hz, 1H), 7.47 - 7.49 (m, 6H), 7.47 (d, J= 7.30 Hz,
1H), 2.764 (s, 3H), 2.761 (s, 3H); 13'C NMR (DMSO, 125 MHz) 5 167.71, 154.55,
, 135.74, 132.61, 132.41, , 129.79, 129.58, 129.06, 128.26, , 127.41,
126.69, 126.34, 126.23, 126.13, 126.04, 125.93, 125.83, , 124.59, 19.52, 19.23.
s(4-chloropheny1)(1H-tetrazol-5—yl)thiazole (DNM0573) 1I-INMR
(DMSO, 500 MHZ) 6 8.10 (d, J= 8.43 Hz, 2H), 7.74 (d, J= 8.44 Hz, 2H), 7.64 (d, J=
7.50 Hz, 2H), 53 (d, J= 8.50 Hz, 2H); ”C NMR (DMSO, 125 MHz) 5 166.61, 153.57,
135.94, 133.87, 132.11, 130.85, , 129.52, 128.50, 128.29.
4,5-Bis(4-f1uomnaphthalen—l-yl)—2-(1H-tetrazol-5~yl)thiazo1e(DNM0578) lI-I
NMR (DMSO, 500 MHZ) 6 9.02-8.95 (m, 1H), 8.24-8.16 (m, 3H), 7.88 (d, J= 8.49 Hz,
1H), 7.79-7.73 (m, 1H), 7.73—7.67 (m, 2H), 7.62 (t, J= 7.80 Hz, 1H), 7.58 (dd, J1: 8.21
Hz, J2 =10.14 Hz, 1H), 7.47 (dd, J, = 7.96 Hz, J; =10.s4 Hz, 1H); 13C NMR (DMSO, 125
MHZ) 6 166.76, 160.47, 159.60, , 157.59, 153.30, 132.99, , 131.08, 130.07,
129.99, 129.08, 128.99, 128.92, 127.82, 127.58, 126.92, 125.63, 123.39, 123.26, 123.23,
, 120.54, 120.49, 120.35, 120.30, 109.92, , 109.55, 109.40.
4,5-Bis(4-biphenyl)—2—(lH—tetrazol—S-yl)thiazole (DNM0581) 1H NMR
(DMSO, 500 MHz) 6 8.17 (d, .1: 8.32 Hz, 2H), 7.89 (d, J= 8.32 Hz, 2H), 7.84-7.72 (m,
8H), 7.56-7.47 (m, 4H), .38 (m, 2H); 13C NMR (DMSO, 125 MHz) 6 167.64,
154.70, 142.75, 140.67, 139.37, 138.93, 132.38, 131.10, 129.43, 129.12, 129.05, 128.23,
127.84, 127.60, 127.17, 126.79, 126.70, 126.68.
4,5-Bis(4ni-butylphenyl)—2—(1H—tetrazol—5—yl)thiazole (DNM0582) 'H NMR
(DMSO, 500 MHz) 6 7.99 (d, J = 8.25 Hz, 2H), 7.60 (d, J= 8.25 Hz, 4H), 7.48 (d, .13
8.30 Hz, 2H), 1.34 (s, 9H), 1.32 (s, 9H); 13C NMR (DMSO, 125 MHz) 6 167.93, 155.03,
154.21, 151.65, 130.58, 129.56, 128.52, 126.35, , 125.27, 34.77, 34.51, 31.02,
.87.
4,5-Bis(3,4—dimethylphenyl)-2—(1H-tetrazolyl)thiazole (DNM0583) 1H
NMR (DMSO, 500 MHz) 6‘ 7.35 (s, 1H), 7.79 (dd, J, = 1.65, J2 = 7.80 Hz, 1H), 7.47 (s,
W0 2012/116452
1H), 7.34 (d, J= 7.95 Hz, 1H), 7.29 (d, J= 7.70 Hz, 1H), 7.19 (d, J= 7.35 Hz, 1H), 2.34
(s, 3H), 2.31 (s, 3H), 2.28 (s, 3H), 2.25 (s, 3H); ”c NMR (DMSO, 125 MHz) 5 168.65,
155.73, 140.64, 138.00, 137.85, , 131.33, 130.85, 130.32, 130.17, 129.93, 127.70,
, 124.49, 19.91, 19.87, 19.75, 19.71.
4,5-Bis(4-chloro-Z—isopropylphenyl)(lH—tetrazol-S-yl)thiazole (DNM0584)
II-I NMR (DMSO, 500 MHz) 5 7.73 (d, J= 8.35 Hz, 1H), 7.62 (d, J= 2.20 Hz, 1H), 7.52
(d, J= 2.10 Hz, 1H), 7.47 (dd, J; = 2.18, J; = 8.33 Hz,1H), 7.30 (dd, J; = 2.13, J2 =
8.23 Hz, 1H), 7.25 (d, J= 8.20 Hz, 1H), 3.77 (sep, J= 6.85 Hz, 1H), 2.93 (sep, J= 6.83
Hz, 1H), 1.21 (d, J= 6.85 Hz, 6H), 1.11 (d, J= 6.80 Hz, 6H); 13c NMR (DMSO, 125
MHz) 6 166.64, 154.25, 150.51, 150.06, 136.15, 134.62, 132.72, 132.50, 131.94, 129.84,
127.13, 126.93, 126.22, 126.16, 30.57, 29.36, 23.72, 23.59.
Example 4
Synthesis of DNM0577 and analogues
1 1'
N |
N15 or“NRC, .
\ 1) 1
/ \ F
TFA + H250, DMF /
ON 2) ArICHO
s | CN
0 S
l I
H / 5551“
y / 10,13th __
on TFA + 01,121., on P11216611), Pam-1),. KF
”1 An
N Ara
/ \ NaN], 2113!:
b / \
s s \f'I
An N1 HN—N
4,5-Diiodothiophene—Z-carboxamide Thiophene—Z-cm‘bonitrile (5.39 g, 49.39
mmol) was dissolved in a mixture 01112804 (10 mL) and TFA (30 mL). NIS (23.34 g,
103.74 mmol) was added in n in 30 min. After 00mplete addition, the reaction
e was further stirred for 4h, and then poured onto 300
g of crushed ice. A white
solid was formed, which was collected, washed with water, and dried together with
phosphorous pentoxide under vacuum to afi'ord 17.8 g (95 %) ofproduct.
4,5-Diiodothiophene—Z—carbonitrile An oven-dried round~bottomed flask was
charged with iodothiophene-2—carboxamide (5.68 g, 15.0 mmol) and 20 mL of
DMF under an argon atmosphere. The solution was cooled on an ice-water bath, and
cyanuric chloride (1.81 g, 9.8 mmol) was then added in one portion. After stirring at 0 °C
for 1 h, the reaction mixture was warmed to room temperature, and stirred for a further
3h. 100 mL of water was added. A white solid was formed, which was collected h
n filtration, washed with water, and dried together with orous pentoxide
under vacuum to afford 4.87 g (90 %) of product.
—((4-Chlor0phenyl)(hydroxy)methyl)—4-iodothiophene-Z-carbonitrile An
oven-dried round—bottomed flask was charged with 4,5-diiodothiophene-Z—carbonitrilc
(1.80 g, 5.0 mmol). After degassed, anhydrous THF (15 mL) was added h syringe.
After cooled to ~78 °C, i-PngCl (3 mL, 2.0 M, 6.0 mmol) was added dropwise. The
reaction was further stirred for 30 min at —78 °C after complete addition. 4—
chlorobenzaldehyde (0.98 g, 7.0 mmol) in 5 mL THF was then added. After stirring for
min at -78 °C for 1 h, the reaction mixture was warmed to room temperature. 50 mL
of saturated s NH4C1 was added. The reaction mixture was extracted with ethyl
acetate. The organic phase was dried over anhydrous sodium sulphate and then
concentrated. The residue was purified by flash chromatography (hexane: EtOAc:
CH2CL2 = 30: 3: 10). 1.39 g (74 %) of product was obtained as a white solid.
.5-(4-Chlorobenzyl)-4—iodothiophenecarbonitrile A round-bottomed flask
was charged with 5~((4—chlorophenyl)(hydroxy)methyl)iodothiophene—2-carbonitrile
(1.67 g, 4.45 mmol). After degassed, dichloromethane (8 mL), TFA (4 mL) and
triethylsilane (1.1 mL, 6.9 mmol) was added sequentially through e. The reaction
was further stirred at rt until complete, and then concentrated. The residue was purified
by flash chromatography (hexane: CH2CL2 = 2: 1). 1.36 g (85 %) of product was
obtained as a white solid.
S-(4-Chlorobenzyl)—4~(4—methylnaphthalen—l-yl)thiophene-Z-carbonitrile A
bottomed flask was d with 5-(4-chlorobenzyl)-4~iodothiophene—2—
carbonitrile (180 mg, 0.50 mmol), 4-methylnaphthalen-l-ylboronic acid (102 mg, 0.55
mmol), Pd2(dba)3 (9.2 mg, 0.010 mmol) and KF (126 mg, 2.17). After degassed, dioxane
(2.0 mL) and P(Bu-t)3 (0.15 mL, 0.2M, 0.03 mmol) was added. The reaction mixture was
stirred at rt until complete. 20 mL of water was added, and the reaction mixture was
extracted with ethyl acetate. The organic phase was dried over anhydrous sodium
te and then concentrated. The residue was purified by flaSh chromatography (5 %
ethyl acetate in hexane). 0.17 g (91 %) of product was obtained as a white solid.
—(5-(4—Chlorobenzyl)-4—(4-methylnaphthalen—1-yl)thiophen—2—yl)—1H—
ole (DNM0577) A round-bottOmed flask was charged with 5-(4-chlorobenzy1)
(4-methylnaphthaleny1)thiophene-2~carbonitrile (170 mg, 0.45 mmol), zinc bromide
(338 mg, 1.50 mmol) and sodium azide (97.5 mg, 1.50 mmol). After ed, DMF (3
mL) was added. The reaction mixture was heated to 110 °C and stirred at this temperature
until complete. The reaction was cooled to It and 30 mL of 0.1 N aqueous HCl was
added. The on mixture was extracted with ethyl acetate. The organic phase was
dried over anhydrous sodium sulphate and then concentrated. The residue was purified by
flash chromatography e: EtOAc: AcOH = 30: 10: 1). 161 mg (85 %) of product
was obtained as a white solid, lH NMR(CDC13, 500 MHZ) 5 8.05 (d, J= 8.46 Hz, 1H),
7.73 (s, 1H), 7.63 (d, J= 8.36 Hz, 1H), 7.53 (t, J= 7.58 Hz, 1H), 7.42 (t, J= 7.53 Hz,
1H), 7.33 (d, J= 7.11 Hz, 1H), 7.23 (d, J= 7.08 Hz, 11-1), 7.14 (d, J= 8.25 Hz, 2H), 6.92
(d, J= 8.14 Hz, 2H), 3.86 (ABq, 2H, MAB = 0.06, JAB = 15.90 Hz), 2.70 (s, 3H); 13C
NMR (CDC13, 125 MHz) 8 152.61, 145.54, 139.59, 137.96, 135.22, 132.97, 132.76,
132.69, 132.27, , 130.05, 128.81, 127.55, 126.33, 126.25, 126.20, 126.16, 124.75,
122.29, 34.24, 19.77.
The following compounds were also prepared using an analogous method:
-(5-(4—Chlorobenzyl)—4—(4—chlorophenyl)thiophenyI)-1H-tetrazole
79) 1H NMR (DMSO, 500 MHz) 8 7.80 (s, 1H), 7.57 (d, Ja 8.70 Hz, 2H), 7.53
(d, J “—" 8.70 Hz, 2H), 7.40 (d, J= 8.34 Hz, 21-1), 7.26 (d, J= 8.34 Hz, 2H), 4.30 (s, 2H);
13C NMR (DMSO, 125 MHz)6143.21, 138.47, , 133.64, 132.51, 131.51, 130.65,
130.49, 130.24, 128.89, 128.65, 122.97, 32.99.
-(5—(4—Chlorobenzyl)—4~(4—chloro—2-isa—propylpheny1)thiophenyl)—1H-
ole (DNM0580) 1H NMR , 500 MHZ) 5 7.66 (s, 1H), 7.31 (d, J= 2.05 Hz,
1H), 7.19 (d, J= 8.35 Hz, 2H), 7.16 (dd, J, = 8.12 Hz, J2 = 2.10 Hz, 1H), 6.99 (d, J=
8.20 Hz, 1H), 7.23 (d, J= 78.35 Hz, 2H), 3.89 (ABq, 2H, ASAB = 0.04, JAB = 14.13 Hz),
2.76 (sep, J= 6.85 Hz, 1H), 1.10 - 0.97 (m, 6H); ”c NMR (CD013, 125 MHz) 5 152.60,
149.93, 144.93, 139.52, 137.57, 134.85, 132.95, , 131.93, 131.70, 130.02, 129.01,
126.41, 126.15, 122.28, 30.02, 30.85, 24.57, 23.42.
4-Chlorobenzyl)—4-(4-fluoronaphthalen-l-yl)thiophen-2—y1)—1H-
tetrazole (DNM0587) 1H NMR (DMSO, 500 MHz) 5 8.17 (d, J'= 8.25 Hz, 1H), 7.75 ~
7.69 (m, 2H), 7.69 - 7.62 (m, 2H), 7.53 - 7.42 (m, 2H), 7.30 - 7.25 (m, 2H), 7.11 - 7.06
(111,211), 4.10 - 3.91 (m, 2H); 13C NMR (CDC13, 125 MHz) 5 158.86, 156.86, 144.75,
138.33, 137.42, 132.85, 132.81, 131.60, 131.28, 130.30, 128.78, 128.75, 128.41, 127.93,
127.85, 127.78, 126.99, 125.40, 125.38, 123.10, 122.97, 120.43, 120.39, 109.53, 109.37,
33.01, 21.07.
-(4-(BiphenyI-Z-yl)(4—chlorobenzyl)thiophen-2~yl)-1H—tetrazole
(DNM0588) 1H NMR (DMSO, 500 MHz) 6 7.58 — 7.52 (m, 1H), 7.52 - 7.46 (m, 3H),
7.43 (d, J= 7.60 Hz, 21-1), 7.33 - 7.24 (m, 5H), 7.20 — 7.13 (m, 2H), 6.89 (d, J= 8.33 Hz,
2H), 3.73 (s, 2H); 130 NMR (DMSO, 125 MHz) 6 143.34, 140.80, 140.48, 139.40,
138.13, 133.20,131.66, , 130.76, 130,42, 130.30,129.03, 128.69, , 128.23,
127.71, 127.03, 122.21, 33.01.
Ethyl 3-(2-(4-01110robenzyI)(1H—tetrazol—S—yl)thiophen—3—yl)benzoate
(DNM0595) IH NMR (DMSO, 500 MHz) 5 8.09-7.93 (m, 2H), 7.87 (s, 1H), 7.80 (d, J=
7.24 Hz, 1H), 7.66 (t, J= 7.71 Hz, 1H), 7.40 (d, J= 7.86 Hz, 2H), 7.26 (d, J= 7.86 Hz,
2H), 4.52 — 4.14 (m, 4H), 1.31 (1, J= 7.07 Hz, 3H); 13c NMR (DMSO, 125 MHz) 5
, 143.15, , 138.45, 135.17, 133.07, 131.49, 130.65, 130, 48,130.40,129.46,
, 128.64, 128.37, 123.12, 60.94, 32.96, 14.11.
1~(3-(2-(4—Chlorobenzyl)—5-(1H—tetrazol-S-yl)thiophen-3—yl)phenyl)butan
one (DNM0600) 1H NMR (DMSO, 500 MHz) 5 8.00 — 7.97 (m, 2H), 7.88 (s, 1H), 7.77
(d, J= 7.70 Hz, 1H), 7.65 (t, J= 7.95 Hz, 1H), 7.39 (d, J= 8.40 Hz, 2H), 7.26 (d, J=
8.40 Hz, 2H), 4.32 (s, 2H), 2.98 (t, J= 7.15 Hz, 2H), 1.63 (sex, J= 7.30 Hz, 1H), 0.93 (t,
J= 7.35 Hz, 3H); l3c NMR (DMSO, 125 MHz) 8 199.80, , 138.94, 138.55,
137.20, 135.19, 132.80, , 130.68, 130.42, , 128.66, 127.75, 127.08, 123.27,
39.85, 32.99, 17.17, 13.61.
-(4-(3~Butylphenyl)(4—chlorobenzyl)thiophen-Z-yl)-1H—tetrazole
06) 1H NMR (DMSO, 500 MHz) 5 7.81 (s, 1H), 7.42 - 7.34 (m, 3H), 7.32 —
7.26 (m, 2H), 7.26 ~ 7.21 (m, 3H), 4.30 (s, 2H), 2.62 (t, J= 7.65 Hz, 2H), 1.56 (qi, J=
7.55 Hz, 2H), 1.31 (sex, J= 7.54 Hz, 2H), 0.90 (t, .1: 7.37 Hz, 3H); ‘30 NMR (DMSO,
125 42.95, 139.99, 138.72, 134.71, 131.41, 130.87, 130.39, 128.77,128.59,
128.58, 128.34, 127.76, 125.68, 122.74, 34.73, 33.04, 21.75, 13.79.
Ethyl 3-(2—(4-chlorobenzyl)~5~(1H—tetrazolyl)thiophenyl)-5—
ybenzoate (DNM0609) 1H NMR (DMSO, 500 MHz) 5 10.12 (s, 1H), 7.81 (s,
1H), 7.45 (s, 1H), 7.43 - 7.38 (m, 3H), 7.27 (d, J= 8.35 Hz, 2H), 7.14 (s, 1H), 4.34 - 4.25
(m, 4H), 1.30 (t, J= 7.10 Hz, 3H); 13C NMR (DMSO, 125 MHz) 8 165.41, 157.89,
150.98, 142.84, 138.79, 138.53,136.37, 131.64, 131.47, 130.45, 130.38, 128.64, 123.18,
119.84, 119.74, 114.99, 60.87, 32.99, 14.11.
-(5-(4-Chlorobenzyl)—4—(3-(cyclopentylmethyl)phenyl)thiophen—2-yl)-IH-
tetrazole (DNM0610) ]H NMR (DMSO, 500 MHz) 5 7.81 (s, 1H), 7.41 —7.43 (m, 3H),
7.30 (d, J= 7.70 Hz, 1H), 7.26 (s, 1H), 7.25 - 7.19 (m, 3H), 4.30 (s, 2H), 2.61 (d, J= 7.45
Hz, 2H), 2.10 — 2.01 (m, 1H), 1.67 — 1.54 (m, 4H), 1.54 - 1.41 (m, 2H), 1.21 - 1.09 (m,
2H); [31: NMR (DMSO, 125 MHz) 8 150.80, 142.42, 142.22, 140.05, 138.70, 134.61,
131.41, 130.92, 130.34, 128.70, 128.67,128.58, 128.11, 125.68, 122.65, 41.32, 41.17,
33.01, 31.90, 24.48.
4—Chlorobenzyl)(1H—tetrazolyl)thiophenyl)phenol (DNM0613)
1H NMR (DMSO, 500 MHz) 5 9.65 (s, 1H), 7.65 (s, 1H), 7.40 (d, J = 8.35 Hz, 2H), 7.29
(t, J: 7.88 Hz, 1H), 7.26 (d, J= 8.40 Hz, 2H), 6.91 (d, J= 7.90 Hz, 1H), 6.87 (s, 1H),
6.82 (dd, J; = 1.79 Hz, J; = 8.10 Hz, 1H), 4.29 (s, 2H); 13C NMR (DMSO, 125 MHz) 5
157.66, 142.45, 139.94, 138.72, 136.01, 131.46, 130.76, 130.44, 129.94, 128.64, ,
115.20, 114.78, 33.07.
~(S-(4-Chlorobenzyl)—4-(3-methoxyphenyl)thiophenyl)—1H—tetrazole
(DNM0615) 1H NMR (DMSO, 500 MHz) 8 7.84 (s, 1H), 7.47 - 7.40 (m, 3H), 7.29 (d, J
= 8.45 Hz, 2H), 7.09 (d, J= 7.80 Hz, 1H), 7.06
— 7.04 (m, 1H), 7.02 (dd, J; = 2.00 Hz, J2
= 8.20 Hz, 1H), 4.34 (s, 2H), 3.81 (s, 3H); 13C NMR (DMSO, 125 MHZ) 5 159.49,
142.69, 139.68, 138.70, 136.13, 131.45, 130.87, , 129.99, , 120.68, 113.83,
113.50, 55.14, 33.06.
-(5-(4-Chl0robenzyl)-4—(3—butoxyphenyl)thiophenyl)-1H-tetrazole
(DNM0616) 1H NMR (DMSO, 500 MHz) 5 7.81 (s, 1H), 7.44 - 7.36 (m, 3H), 7.26 (d, J
= 8.35 Hz, 2H), 7.05 (d, J= 7.60 Hz, 1H), 6.99
— 6.95 (m, 2H), 4.31 (s, 2H), 3.95 (t, J:
6.50 Hz, 2H), 1.69 (pen, J= 6.96 Hz, 2H), 1.43 (sex, J= 7.50 Hz, 2H), 0.94 (t, J= 7.40
Hz, 2H); 13C NMR (DMSO, 125 MHz) 5 158.90, 150.96, 142.40, 139.75, 133.74, 136.10,
131.43, 130.85, 130.39, 129.96, 128.63, 122.80, 120.51, 114.13, 67.14, 33.04, 30.73,
18.72, 13.72.
-(5—(4~Chiorobenzyl)—4—(3~ethoxyphenyl)thiophen—yl)—lI-I—tetrazole
(DNM0617) lH NMR (DMSO, 500 MHz) 5 7.81 (s, 1H), 7.44 - 7.37 (m, 3H), 7.26 (d, J
= 8.40 Hz, 2H), 7.05 (d, J= 7.65 Hz, 1H), 7.01 - 6.95 (m, 2H), 4.31 (s, 2H), 4.04 (q, J=
7.00 1), 1.33 (t, J= 7.00 Hz, 3H); 130 NMR (DMSO, 125 MHz) 6 158.74, 142.67,
WO 16452
139.70, 138.71, 136.11, 131.44, 130.89, 130.43, 130.01, 128.63, 120.54, 114.20, 114.01,
63.05, 33.05, 14.63.
-(5-(4-Chlorobenzyl)—4-(3-propoxyphenyl)thiophen—2—yl)-lH-tetrazole
18) 1H NMR (DMSO, 500 MHz) 5 7.82 (s, 1H), 7.43 - 7.36 (m, 3H), 7.26 (d, J
= 8.40 Hz, 2H), 7.05 (d, J= 7.65 Hz, 1H), 7.00 - 6.95 (m, 2H), 4.31 (s, 2H), 3.91 (1:, J=
6.60 Hz, 2H), 1.73 (sex, 7.06, 2H), 0.98 (t, J= 7.40 Hz, 3H); 13(1 NMR (DMSO, 125
MHz)6158.88,142.50, 139.74, 138.73, 136.09, 131.43, 130.91, 130.39, 129.97,128.63,
122.72, , 114.14, 68.92, 33.04, 22.02, 10.37.
Example 5
Synthesis ofDNM0461 and analogues
/DPM PPM
H i1:»
N NM.
N\ NH _ 1.leq.Ar,13(0H),
TM N130“);
CHZCIl
\ A:2Pd(PP}li‘))_i‘°::n§azCO] \ figfiyzco:
NI l
/ |
/ r1",
N 1=1 ,“F1f
N\ NH
I MN, 2,3,2 PhICI-IOI-LTEOH
"""B Wr \
/ DMF \ Mme
N "H
221:4- Brlrimmon),
CH2C12
\ meringfixmragco,
i —'N |\ '
/ /
-(3,5-Dibromophenyl)—1H—tetrazole A round—bottomed flask was charged with
3,5-dibromobenzonitrile (15.65 g, 60.00 mmol), sodium azide (7.80 g, 120.00 mmol) and
zinc bromide (27.00 g, 120.00 mmol). Afier degassed, DMF (100 mL) was added. The
reaction mixture was heated to 120 °C and stirred at this temperature until complete. The
reaction was cooled to rt and then in an ice-water bath. 300 mL of 1N aqueous HCl was
added. The white itate formed was collected by suction filtration, washed with
water, and dried together with phosphorous pentoxide under vacuum to afford 17.32 g
(95 %) of t.
2—Benzhydryl-5—(3,5—dibromophenyl)-2H-tetrazole A suspension of 5-(3,5-
dibromophenyl)—lH-tetrazole (6.08 g, 20.00 mm01), diphenylmethanol (3.68 g, 20.00
mmol) and TsOH.I-I20 (0.38 g, 2.00. mmol) in toluene (50.0 mL) was heated to 100 °C
until a clear solution was obtained. The solution was cooled to rt, and filtered. The
filtration was concentrated, and the residue was purified by recrystallization in ether and
hexane to afford 8.00 g (85 %) of product as a white solid.
hydryl-5—(3,5-bis(4-methylnaphthalen-l-yl)phenyl)-2H-tetrazole A
round—bottomed flask was charged with 2-benzhydryl(3,5-dibromophenyl)-2H—
tetrazole (282 mg, 0.60 mmoi), 4-methylnaphthalen-l-ylboronic acid (251 mg, 1.32
mmol) and Pd(PPh3)4 (35 mg, 0.03 nunol). After degassed, dioxane (5 mL) and aqueous
sodium carbonate (3 mL, 2M, 6.0 mmol) was added. The reaction mixture was heated to
90 °C until the reaction was complete. 30 mL of water was added, and the on
mixture was ted with ethyl acetate. The organic phase was dried over anhydrous
sodium sulphate and then concentrated. The residue was purified by flash
chromatography (hexane: CHZCIZ = 2: 1) to afford 0.32 g (90 %) of product as a white
solid.
-(3,5-Bis(4-methylnaphthalen—l~yl)phenyl)-2H-tetrazole (DNM0461) 2—
Benzhydryl—S-(3,5-bis(4—methylnaphthalen~1—y1)phenyl)-2H-tetrazole (0.32 g, 0.54
mmol) was dissolved in dichloromethane (2 mL). Anisole (0.3 mL, 2.76 mmol) and TFA
wo 2012/116452
(1 mL) were added sequentially. The on was stirred overnight, and then
concentrated. The e was d by flash chromatography (hexane: ethyl acetate:
AcOH = 30: 10: 1) to afford 0.22 g (95.5 %) of product as a white solid, 1H NMR
(DMSO, 500 MHz) 5 8.24 (d, J= 1.55 Hz, 2H), 8.25 (d, J: 8.15 Hz, 2H), 8.03 (d, J=
8.20 Hz, 2H), 7.72 (s, 1H), 7.65 (t, J= 7.58 Hz, 2H), 7.60 (t, J= 7.44 Hz, 2H), 7.56 (d, J
= 7.15 Hz, 2H), 7.51 (d, J = 7.29 Hz, 2H), 2.74 (s, 6H); 13c NMR (DMSO, 125 MHz) 5
141.58, 136.38, 134.51, , 132.43, 130.72,127.15, 127.03, 126.51, 126.32, 126.11,
, 124.76.19.21.
The following compounds were also prepared using an analogous method:
—(2,5~Bis(4—methylnaphthalen-1—yl)phenyl)—1H-tetrazole(DNM0446) 1H
NMR (DMSO, 500 MHz) 5 8.16 (d, J= 8.45 Hz, 1H), 8.06 (d, J= 8.41 Hz, 2H), 7.97 (s,
1H), 7.80 (dd, J, = 7.84 Hz, J; = 1.80 Hz, 1H), 7.69 — 7.49 (m, 7H), 7.42 (t, J= 7.56 Hz,
1H), 7.39 (d, J= 7.09 Hz, 1H), 7.28 (d, J= 7.09 Hz, 1H), 2.73 (s, 3H), 2.70 (s, 3H); 13C
NMR (DMSO, 125 MHz)5139.96, 138.93, 136.37, 135.51, 134.38, 133.98,132.46,
132.21, 132.06, 132.03, 131.37, 130.98, 130.80, 127.11, 127.00, 126.43, 126.34, 126.10,
126.04, 125.89, 125.76, 125.73, 124.73, 124.45, 19.23, 19.14.
-(2,5-Bis(4-chloromethylpheny1)phenyl)—lH-tetrazole (DNM0447) 1H
NMR (DMSO, 500 MHZ) 5 7.79 (s, 1H), 7.65 (d, J= 7.16 Hz, 1H), 7.51 - 7.43 (m, 2H),
7.38 (s, 2H), 7.33 (s, 1H), 7.22 (d, J= 8.09 Hz, 11-1), 7.05 (d, J= 8.14 Hz, 1H), 2.33 (s,
3H), 1.97 (s, 311); 13C NMR (DMSO, 125 MHz) 5 139.71, 138.72, 132.58, 138.20,
138.13, 137.59,132.41, 132.10, 131.39, 131.20, 131.08, 130.96, 130.10, , 129.00,
126.06, 125.39, 20.05, 19.56.
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S—(3,5-Bis(4-chlorophenyl)phenyl)-2H-tetrazole (DNM0470) 1H NMR
(DMSO, 500 MHz) 8 8.34 (d, J= 1.69 Hz, 2H), 8.16 (d, .1: 1.69 Hz, 2H), 7.95 — 7.91 (m,
4H), 7.65 — 7.61 (m, 4H); 13(3 NMR (DMSO, 125 MHz) 8 140.76, 137.76, 133.22,
129.07,128.94, 127.58, .
-(4'—Chloro—S—(4—methylnaphthalen-I-yl)biphenylyl)-1H-tetrazole
(DNM0480) 1H NMR (DMSO, 500 MHz) 8 8.42 (t, J= 1.60 Hz, 1H), 8.16 (d, J= 7.98
Hz, 1H), 8.14 (t, J= 1.58 Hz, 1H), 7.95 (t, J= 1.62 Hz, 1H), 7.92 (d,J= 7.90 Hz, 1H),
7.90 (d, J= 8.70 Hz, 2H), 7.67 — 7.63 (m, 1H), 7.61 (d, J= 8.70 Hz, 2H), 7,594.55 (m,
1H), 7.54 - 7.50 (m, 2H), 2.76 (s, 3H); 13C NMR(CDC13, 125 MHz) 8 143.14, 141.32,
138.28, ,134.98, 134.46, 133.04, 131.81, 131.53,129.36, 128.72, 128.11, 127.06,
, 126.31,126.26, 126.08, 125.13, 124.79, 19.84.
~(3,5_Bis(4-fluoronaphthalen-I~yl)phenyl)—2H-tetrazole (DNM0539) 1H
NMR (DMSO, 500 MHz) 5 8.26 (d, J= 1.55 Hz, 2H), 8.19 (dd, J; = 8.15 Hz, J2 = 1.87
Hz, 2H), 8.05 (d, J= 7.87 Hz, 2H), 7.77 (t, J= 1.55 Hz, 1H), 7.75-7.65 (m, 6H), 7.49 (dd,
J, = 10.60 Hz, .12 = 7.95 Hz, 2H); 130 NMR (DMSO, 125 MHz) 8 158.81, 156.81,
140.71, 134.46, , 133.80, 132.00, 131.97,128.67,127.55, 127.48, 127.46, 126.96,
125.44, 125.42, 123.15, 123.02, 120.46, 120.42, 109.60, 109.44.
Example 6
Synthesis ofDNM0566 and analogues
W0 2012/116452
U _NBL... n mm),
—-—-————1—
coca TFA +]{ 50
1 4
s Br COOEt Hymn”:‘Na co,mane+
kn Ar
LiOI-l
”‘0 + “‘0“
coca Ar COOH
Ethyl 4,5-dibromothiophene—Z-carboxylate To a stirred solution of ethyl
thiophene-Z-caroxylate (12.62g, 80.8mmol) in 12 mL of sulfuric acid and 40 mL of TFA
was added NBS (32.00g, 177.8mmol) in portions during 2~3 hours. After stirred
overnight at room ature, the reaction e was poured onto ice. The white
precipitate formed was collected by suction filtration, and purified by tallization in
methanol. 23.38g (92%) ofproduct was obtained as a white solid, mp: 47.0 - 48.0 (lit. mp
48.0 m 49.0 °C, Bull. Chem. Soc. Jpn. 1991, 64 (8), 2566—8).
Ethyl 4,5-bis(4-chloroisopropylphenyl)thiophene—2—carhoxylate A round-
bottomed flask was charged with ethyl bromothiophene-Z-carboxyiate (235.5 mg,
0.75 mmol), 4-chloroisopropylphenyboronic acid (327.5 mg, 1.65 mmol) and
Pd(PPh3)4 (43 mg, 0.0375 mmol). After degassed, dioxane (5 mL) and aqueous sodium
carbonate (3 mL, 2M, 6.0 mmol) was added. The on mixture was heated to 90 °C
until the reaction was complete. After cooled to room temperature, the reaction e
was diluted with 30 mL of water and then extracted with ethyl acetate. The organic phase
was dried over anhydrous sodium sulphate and then concentrated. The residue was
purified by flash chromatography (hexane: CI-12C12 m 2: 1) to afford 0.28 g (81 %) of
product as a white solid.
4,5-Bis(4-chloro~2-isopropylphenyl)thiophene-Z—carboxylic acid (DNM0566)
To a solution of ethyl 4,5-bis(4—chloro—2-isopropylphenyl)thiophene—2-carboxylate (280
mg, 0.61 mmol) in THF (3 mL) and MeOH (3 mL) was added a soiution of LiOH (72
mg, 3.0 mmol) in water (2 mL). The reaction was d at rt until complete, and then
concentrated. The residue was re-dissolved in 20 mL r and acidified with 1N aq.
HCl to pH 2. The white precipitate was extracted with ethyl acetate. The c phase
was dried over anhydrous sodium sulphate and then concentrated. The e was
purified by recrystallization in a mixture t of ethyl acetate and hexane to afford
0.24 g (91 %) of product as a white solid, II-l NMR(CDC13, 500 MHz) 5 7.78 (s, 1H),
7.23 (d, J= 2.15 Hz, 1H), 7.22 (d, J= 1.88 Hz, 1H), 7.13 - 7.07 (m, 2H), 7.03 (dd, J1=
8.23 Hz, J2 = 2.20 Hz, 1H), 6.89 (d, J= 8.26 Hz, 1H), 2.95 (m, 2H), 1.04'(d, J= 4.94 Hz,
6H), 0.98 (d, J= 6.95 Hz, 6H); ”C NMR (013013, 125 MHz) 6 167.13, 149.87, 149.06,
146.58, 139.45, 137.21, 135.53, 134.39,132.79, 131.84, 131.57, 131.14, 129.01, 126.43,
126.28, 125.86, 125.77, 30.27, 30.23, 23.93.
The following compounds were also prepared using an analogous method:
4,5-Bis(4-biphenyl)thiophene—Z-carboxylic acid (DNM0497) 1H NMR (CDClg,
500 MHz) 6 13.34 (s, 1H), 7.86 (s, 1H), 7.72 - 7.65 (m, 8H), 7.50 - 7.32 (m, 10H); 13(3
NMR (CDCI3, 125 MHZ) 5 162.69, 143.94, 140.16, 139.30, 139.09, , 138.17,
135.56, 134.08, 133.00, 131.98, 129.46, 129.38, 129.02, 128.98, 127.87, 127.63, 127.12,
126.86, 126.61, 126.53.
s(4-chlorophenyl)thiophene—Z-carboxylic acid 98) 1H NMR
(CDC13, 500 MHz) 8 13.39 (s, 1H), 7.81 (s, 1H), 7.46 (d, J= 8.40 Hz, 2H), 7.42 (d, J=
8.40 Hz, 2H), 7.32 (d, J= 8.50 Hz, 2H), 7.29 (d, J4 8.42 Hz, 2H); 13(J NMR(CDC13, 125
MHz) 6 162.53, 143.06, 137.68, 135.30, 133.60, 133.47, 133.44, 132.47, 131.46, 130.74,
130.64, 129.13, 128.78.
4,5—Bis(5-ch10ro-Z-methylphenyl)thiophene-Z—carboxylic acid (DNM0501) lH
NMR(CDC13, 500 MHz) 6 13.38 (s, 1H), 7.77 (s, 1H), 7.36 (d, J= 2.20 Hz, 1H), 7.34
(dd, J; = 2.20 Hz, J; = 8.15 Hz, 1H), 7.26 — 7.22 (m, 3H), 7.05 (s, 1H), 2.01 (s, 3H), 1.96
(s, 3H); 13C NMR (CDC13, 125 MHz) 5 162.63, 143.31, 138.84, 136.36, 135.58, 134.85,
134.75, 133.77, 133.76, 132.18, 132.08, 130.47, 130.07, 129.86, 129.60, 128.88, 127.74,
19.22, 19.09.
4,5-Bis(3—chlorophenyl)thiophene—Z-carboxylic acid (DNMOSOZ) 1H NMR
(CDC13, 500 MHz) 5 13.34 (s, 1H), 7.85 (s, 1H), 7.47 (d, J; 8.10 Hz, 1H), 7.44 - 7.34
(m, 5H), 7.26 (d, J= 7.65 Hz, 1H), 7.20 (d, J= 7.45 Hz, 1H); 130 NMR (CDC13, 125
MHz) 5 162.50, 142.92, 137.70, , 135.23, 134.51, 133.77, 133.50, , 130.87,
130.48, 128.75, 128.56, , , , 127.63.
4,5-Bis(2,4-dimethylpheny1)thiophene-Z-carboxylic acid (DNM0503) 1H
NMR (CDC13, 500 MHz) 5 13.19 (s, 1H), 7.66 (s, 1H), 7.12 (d, J= 8.25 Hz, 1H), 7.03 -
6.95 (m, 3H), 6.87 - 6.81 (m, 2H), 2.24 (s, 3H), 2.22 (s, 3H), 2.07 (s, 3H), 1.93 (s, 3H);
13C NMR (CDC13, 125 MHz) 5 162.82, 144.83, 139.77, 138.16, , , 135.28,
135.22, 132.49, , 130.98, 130.91, 130.02, 129.43, 126.45, 126.27, 20.66, 20.61,
19.78, 19.64.
4,5-Bis(4-chlor02-methylphenyl)thiophene-Z-carboxylic acid (DNM0561) 1H
NMR (CDC13, 500 MHZ) 8 7.81 (s, 1H), 7.17 (d, J= 2.02 Hz, 1H), 7.14 (s, 1H), 7.13 -
7.11 (m, 2H), 7.03 (dd, J1= 8.24 Hz, J2 = 2.02 Hz, 1H), 6.87 (d, J= 8.24 Hz, 1H), 2.12
(s, 3H), 2.03 (s, 3H); 13C NMR (CD013, 125 MHz) 5 167.74, 147.16, 140.15, 139.20,
138.26, 137.56, 135.29, 134.06, 133.61, 132.85, 131.97, 131.74, 131.13, 131.03, 130.88,
126.50, 126.43, 20.61, 20.59.
Example 7
Synthesis ofDNM0631 and ues
['L Br Br NJ”.
NBS N’L‘u
/ \ SOCI; A :I
“‘0“
OOH Br COOH ”HI-”=0 Br com-I, 13”“
S S S
Br Ar Ar
); NaN,, my,
\ / / \ n
Pd may, N: no, DMF
B \N
r on
8 ne -|- P 2{0 Ar ON s \ l/
’ 015:?8r
m NaN3, 2113:, d ‘:i d on DMF ““
2-Bromo—3-methylthiophene NBS (8.90 g, 50.0 mmol) was added portion wise
to a stirred solution of 3—mehy1thiophene (4.90 g, 50.0 mmol) in acetic acid (20 mL) at rt.
After complete addition, the reaction was stirred at rt until it was te. The reaction
mixture was poured into ice-water, and then extracted with a 3:1 mixture t of
hexane and ether. The organic layer was washed with 1N aq. NaOH and brine. After
dried over anhydrous sodium sulphate, the organic phase was concentrated on vacuum to
afford 2-bromo—3~methylthiphene (8.20 g, 92.7 %), which was used directly in the next
step without further purification.
3-Methylthiophene-2—carbonitrile A round-bottomed flask was charged with 2-
brornoInethylthiphene (8.20 g, 46.3 mmol)‘and CuCN (8.29 g, 92.6 mmol). After
degassed, 50 mL ofDMF was added. The reaction mixture was heated to 150 °C
W0 2012/116452
overnight. After cooled to room temperature, the reaction was quenched with 250 mL of
water, and extracted with ethyl acetate. The c phase was dried over anhydrous
sodium sulphate and then concentrated. The residue was passed through a short and fat
silicon column, and the column was eluted with hexane to afford 5.07g of product.
4,5-Dibromo-S-methylthiophene~2-carbonitrile Bromine (4.25 mL, 82.6 mmol)
was added drop wise to a stirred on of 3—mehylthiophene—Z-carbonitrile (5.07 g,
41.2 mmol) in DMF (20 mL) at rt. After te addition, the on was heated to 60
°C until it was complete. After cooled to rt, the reaction mixture was poured into ice-
water. The light yellow solid formed was collected through suction filtration, and dried
together with P205 under vacuum to afford 9.84 g of 4,5~dib1‘omo-3—methylthiophene—2—
carbonitrile.
4,5—Bis(4—chloroisopropylphenyl)—3-methylthiophene—Z-carbonitrile A
round-bottomed flask was charged with 4,5~dibromo—3-methylthiophene—2-carbonitrile
(140.5 mg, 0.50 mmol), 2-(4-chlor0—2—isopropylphenyl)—4,4,S,S-tetramethyl-l,3,2-
dioxaborolane (3 08.7 mg, 1.10 mmol) and Pd(PPh3)4 (29 mg, 0.025 mmol). After
degassed, dioxane (5 mL) and aqueous sodium carbonate (3 mL, 2M, 6.0 mmol) was
added. The on mixture was heated to 95 °C until the on was complete. After
cooled to room temperature, the reaction mixture was diluted with 30 mL of water and
then extracted with ethyl acetate. The organic phase was dried over anhydrous sodium
sulphate and then concentrated. The residue was purified by flash chromatography
(hexane: CH2C12 = 4: 1) to afford 190.5 mg (89 %) of product as a white solid.
-Bis(4-chloro-2—isopropylphenyl)~3-methylthiophenyl)-1H—tetrazole
(DNM0631) A round-bottomed flask was charged with 4,5—bis(4—chloro-2—
wo 2012/116452
isopropylphenyl)—3 -methy11hiOphene-Z-carbonitrile (190.5 mg, 0.44 mmoi), zinc bromide
(338 mg, 1.50 mmol) and sodium azide (97.5 mg, 1.50 mmol). After degassed, DMF (3
mL) was added. The reactiOn mixture was heated to 130 ”C and stirred at this temperature
until complete. The reaction was cooled to It and 3 0 mL of 0.1 N aqueous HCl was
added. The reaction mixture was extracted with ethyl acetate. The organic phase was
dried over anhydrous sodium sulphate and then concentrated. The residue was purified by
flash chromatography (hexane: EtOAc: AcOI—I 2 30: 10: 1). 188.7 mg (90 %) of product
was obtained as a white solid, 1H C13, 500 MHZ) 5 7.25 - 7.22 (m, 2H), 7.18
(dd, J1= 8.18 Hz, J2 = 2.13 Hz, 1H), 7.09 - 7.06 (m, 2H), 7.02 (d, J= 8.20 Hz, 1H), 3.04
(sep, J= 6.75 Hz, 1H), 2.74 (sep, J= 6.80 Hz, 1H), 2.37 (s, 3H), 1.12 (d, J2 6.80 Hz,
3H), 1.05 (d, J= 6.80 Hz, 6H), 0.90 (d, J= 6.80 Hz, 3H); l3C NMR (CDCI3, 125 MHZ) 5
, 149.87, 141.11, 140.81, 140.72, 135.33, 134.47,132.72, 132.02, 131.51, 129.01,
126.30, 126.20, 125.84, 125.52, 30.35, 30.10, 24.76, 23.60, 23.13, 15.78.
The following compounds were also ed using an analogous :
—(4,5—bis(4-chloro-2—methylphenyl)~3-methylthiophen-Z-yl)-1H-tetrazole
(DNM0614) lH NMR(CDC13, 500 MHz) 5 7.15 (s, 13), 7.11 (s, 1H), 7.08 (d, J= 8.20
Hz, 11-1), 7.05 ~ 7.01 (m, 2H), 6.93 (d, J= 8.30 Hz, 1H), 2.31 (s, 3H), 2.17 (s, 3H), 2.04
(s, 3H); 13C NMR (CDC13, 125 MHz) 5 , 140.34, 139.95, 139.41, 139.16, 134.57,
133.83, 133.81, , 132.20, 131.43, 130.52, 130.42, , 126.00, 20.81, 20.03,
.56.
-(4,5-Bis(4—methylnaphthalen-l-yi)-3—methylthiophenyl)-1H-tetrazole
(DNM0620) 1H NMR (CDC13, 500 MHz) 6 8.04 (d, J= 8.30 Hz, 1H), 7.91 (d, J= 8.30
Hz,1H), 7.86 (d, J= 8.40 Hz, 1H), 7.77 (dd, J; = 8.30 Hz, J; = 1.10 Hz, 1H), 7.48 — 7.37
WO 16452
(m, 3H), 7.32 (t, J= 7.65 Hz, 1H), 7.18 (d, J= 7.20 Hz, 1H), 7.06 - 7.00 (m, 3H), 2.55 (s,
3H), 2.54 (s, 3H), 2.28 (s, 3H); l3c NMR(CDC13, 125 MHz) 5 , 141.77, 141.39,
135.21,134.23, 132.73, 132.52, 132.44, 132.35, 131.52, , 128.72, 127.94, 126.61,
126.30, 126.07, 125.82, 125.74, 125.70, 125.64, 125.52,124.44, 124.10, 119.63, 19.49,
19.42, 15.54.
—(4,S-Bis(3-butylphenyl)—3-methylthiophen—2—yl)—lH—tetrazole (DNM0627)
‘H NMR (CD013, 500 MHz) 5 7.30 (1, J= 7.53 Hz, 1H), 7.17 (d, Jm 7.70 Hz, 1H), 7.15
(t, J= 7.60 Hz, 1H), 7.10 - 6.97 (m, 5H), 2.59 (t, J= 7.58 Hz, 2H), 2.48 (s, 3H), 2.46 (1., J
= 7.75 Hz, 2H),1.57
- 1.49 (111,211), 1.45 - 137011.211), 1.33 - 1.18 (m, 4H), 0.90 (t, J
= 7.35 Hz, 3H), 0.89 (1, J= 7.30 Hz, 3H); 131: NMR (CDC13, 125 MHz) 8 143.22, 143.19,
,141.28, 141.17, 135.74, 133.10, 130.46, 129.16,128.47, 128.30, 128.15, 127.67,
127.45, 126.23, 125.52, 35.42, 35.36, 33.56, 33.26, 30.31, 22.15, 22.07, 15.64, 13.92,.
—(4,S-Bis(4-fluoronaphthalenyl)~3-methylthiophen-Z—yl)-1H-tetrazole
(DNM0628) 1H NMR(CDC13, 500 MHz) 6 8.10 - 8.06 (m, 1H), 8.03 (d, J= 8.30 Hz,
1H), 7.96 (d, J= 8.50 Hz, 1H), 7.76 - 7.71 (m, 1H), 7.56 - 7.44 (m, 3H), 7.39 (1, J= 7.50
Hz, 1H), 7.22 (dd, J, = 5.40 Hz, J2 = 7.80 Hz, 1H), 7.08 (dd, J, = 5.38 Hz, .12 = 7.83 Hz,
1H), 6.95 - 6.87 (m, 2H), 2.34 (s, 3H); ”0 NMR (CD013, 125 MHz) 5 159.96, 159.45,
157.93, 157.44, 141.79,141.44, 133.85, 133.81,133.52, 133.49, 128.95, 128.89, 128.71,
128.67, 128.08, 128.02, 127.36,127.24, ,126.20, 125.67, , 125.39, ,
123.59, 123.56, 123.43,121.05,121.01,120.70,120.66, 109.03, 108.87, 108.77, 108.61,
.53.
Example 8
Measurement ofAcpS inhibition
Materials
W0 2012/116452
[3H]Acetyl-C0A was mixed as 1 volume ofPerkin Elmer NET290 radiolabeled stock
(e. g. 0.1 rnCi/ml, 3.7 Ci/mmol in Na—acetate, pH 4.5-5.0 = 27 uM) with 1.2 volumes
of 1 mM unlabelled acetyl—CoA (Sigma). Trichioroacetic acid was prepared as a 10%
w/v solution. Bovine serum albumin was ed as a 25 mg/ml solution in water.
DTT was prepared as a 50 mM solution in water.
Procedure
1. A standard reaction contained the following in a total volume of 10 til:
Stock reagents Volume (LL13 Final concentration
1 M Na—phosphate, pH 7 0.5 50 mM
0.1 M MgClz 1 10 mM
50 mM DTT 1 5 mM
yl carrier n (ACP) 4.4 pg 50 uM
AcpS enzyme ~0.06 pg
570 uM [3H]Acetyl-C0A 1 57 11M
Test compound e.g. DNM0488 0.5 predetermined uM e.g. 500 or 50
ddeo to 10 pl
2. Tubes were incubated at RT. [3H]acetyi—C0A was added last to start the reaction.
To stop the reaction, 2 ul was removed to a 1.5»ml microfuge tube containing 800
nl cold 10% TCA. Up to four time points were collected for each on, e.g. at
min, 10 min, 30 min, and 60 min.
3. 20 pl of 25 mg/ml BSA was added to each tube, mixed and incubated on ice for
min, then fuged at 12,000 g for 5 min to form a pellet. Supernatant was
removed using P1000.
4. Each pellet was washed twice with 800 pl of cold 10% TCA each time, then
centrifuged at 12,000 g for 5 min after each wash. The supernatant was discarded.
Each pellet was ended in 50 ul of formic acid. The suspension was
transferred to a scintillation vial and radioactivity was measured in 2 ml of liquid
scintillation cocktail.
The random (stochastic) error in scintillation counting is proportional to the
square root of the counts (not dpm) accumulated in the counting period; i.e. 10%
for 100, 3.3% for 1,000, 1% for 10,000, etc. ed radioactive counts (dpm)
are in the thousands, the assay provides useful data. s are reported in terms
of% activity with respect to the substracted counts for working substrate.
A % activity of less than about 40% is indicative ofAcpS enzyme inhibition by
the test compound at that concentration,
For results, see the table in the Example below.
Example 9
Measurement ofminimum inhibitory concentrations (MICs)
Susceptibilities to the compounds were determined using the National Committee
for Clinical Laboratory Standards (NCCLS) M7-A6 broth microdilution method. Cation-
adjustcd Mueller~Hinton broth (Ca2+, 25 pg/mL; Mg“, 12.5 pg/mL) microdilution panels
were ed to n antimicrobial doubling dilution concentrations of an appropriate
range. DMSO (diinethylsulfoxide) controls were orated into the panel to mimic
the quantity ofDMSO used in dissolving some of the compounds at the higher
concentrations. Each final panel well volume was 100 uL with a bacterial inoculum of 5
x 105 CPU (colony forming units) / mL of the relevant bacterium. Panels were read
following 16 to 20 h of tion at 35 degrees Celsius in ambient air. The MIC
(minimum inhibitory concentration) was defined as the lowest concentration of
antimicrobial inhibiting e growth.
The following table, as well as indicates results of experiments of both
Examples 8 and 9 where ble, demonstrating AcpS inhibition and antimicrobial
effects on Methicillin-Resistant Staph. aureus (MRSA) and E. coli D22:
% AcpS
activity % AcpS MIC MIC E
Compound @ 500 activity MRSA coii D22
ID uM at 50 mm (uM) (uM)
DNMO486 0.16 0.82 2 >125
DNM0487 0.08 3.34 8 >125
DNM0488 0.32 11.49 4 125
DNM0489 0 17.89 2 >125
DNM0504 0.16 7.33 125 125
DNM0508 0.1 44.92 4 >125
DNM0509 0.2 31.07 15 >125
DNM0512 0.7 37.29 8 >125
DNM0531 4.38 96.76 60 >125
DNM0534 0 33.98 8 >125
DNM0535 3.48 92.62 125 >125
DNM0536 0.2 8.25 8 125
DNM0537 0.14 1.28 2 125
DNM0538 0.58 82.18 >125
DNM0541 0.3 63.12 mmmmmoocnmoo4>4>moo >125
2 0.7 9.58 >125
DNM0546 5.16 37.21 >125
DNM0548 0.1 3.1 60
9 0.48 71.31 >125
DNM0550 0.39 47.83 mm >125
9 0.5 7.01 >125
DNM0560 0.06 63.58 _|. >125
DNM0563 0.56 15.12 125
DNM0564 0.75 47.61 >125
DNM0565 0.11 22.91 >125
DNM0570 0.19 33.7 AAA 125
DNM0571 0.11 8.19 >125
DNM0575 0.23 5.86 >125
DNM0572 0.51 4.41 >125
6 0.15 5.88 >125
DNM0577 0.4 5.54 >125
DNM0579 3.02 15.74 125
DNM0580 0.85 1.62 125
DNM0587 2.13
DNM0588 2.67
DNM0446 25.36 >125
DNM0447 0.47 32.56 ._|. >125
DNM0453 23.76 >125
DNM0457 1.56 60
DNM0461 0.85 13.39 >125
DNM0464 0.28 9.03 >125
DNM0470 27.69 125
DNM0474 0.3 15.08 ,>125
DNMO479 0.1 12.79 >125
2.04 DNM0480 7.35 125
2.7 DNM0493 25.28 >125
DNM0510 AAnNN-bA—xoommbcoooouoom-pmoaoo 0.12 8.4 >125
DNM0511 14.36 >125
DNM0514 0.14 5.73 >125
DNM0515 3.44 30.26 >125
DNM0516 32.01 >125
DNM0520 20.86 >125
DNM0529 0.16 91.56 >125
DNM0532 0.22 30.66 0300 mOOl’QNN-Dtm >125
DNM0539 39.39 >125
DNM0648 60.1
Example 10
ement of combination MICS for evaluation of
antibiotic adjuvant potential in Ps. aeruginosa
Generally following the procedure ofExample 9, MICs of ampicillin, erythromycin,
and azithromycin were determined against Ps. aeruginosa. Parallel to this effort,
solutions were ed which were identical. To each of these were added 0.5 uL of
stock solution of a given compound of the present invention, then diluted to produce a
final concentration of 125 HM, 60 uM, and/or 30 11M for determination of adjuvant
activity. Compounds were determined to be antibiotic adjuvants if the mixture produced
a lower MIC than that of the antibiotic agent alone. Results were as follows,
demonstrating antimicrobial nt effects:
0 DNM0487 at 125 uM (standalone MIC >2 mM) produced an up to 60-fold lower
MIC for erythrornycin.
v DNM0487 at 125 M produced an up to d lower MIC for llin.
- DNMO488 at 125 M produced an up to 60—fold lower MIC for ampicillin.
- DNM0501 at 60 uM produced an up to 60-fold lower MIC for eryttuomycin.
o DNM0501 at 60 uM produced an up to 250—fold lower MIC for ampicillin.
o DNM0537 at 60 uM produced an up to 60—fold lower MIC for erythromycin.
- DNM0537 at 30 MM produced an up to ~7-fold lower MIC for erythromycin.
- DNM0537 at 30 MM produced an up to 250-fold lower MIC for llin.
0 DNM0548 at 125 14M produced an up to 125-fold lower MIC for omycin.
0 DNM0548 at 125 uM produced an up to 125-fold lower MIC for ampicillin.
Example 11
Measurement of MICs for selected compounds
against a panel of challenge pathogens
The inocula for each ial strain were ed by g 5-10 distinct
colonies frorn the culture plates and suspending them in the appropriate broth as per
Clinical and Laboratory Standards Institute (CLSI) guidelines M07-A8, M24-A or M11—
A7 as appropriate. The inoculum was resuspended by vigorous shaking on a vortex mixer
for 155. The turbidity was then adjusted to McFarland rd 0.5 (1-5 x 106 CFU/ml).
The inoculum was fiu'ther diluted in the appropriate media for MIC tests to give a final
W0 2012/116452
inoculum in each well of 2—8 x 105 CPU/m1. MICs were tested in the appropriate broth in
accordance with the appropriate CLSI guidelines.
A stock solution of each compound was prepared at a concentration of 1.28 g/L in
DMSO. The stock was further diluted in the appropriate media to give a top starting
concentration of 128 mg/L in the assay. 100uL of the appropriate media, as per CLSI
guidelines, was dispensed into each well in columns 2—12. 200uL of the each compound
solution (at L) was sed into each well in column I. IOOpL aliquots were
pipetted fi'om column 1 wells and dispensed into column 2 with a multichannel pipette (i
2% coefficient of variation) thus diluting two-fold. 100 uL samples were then pipetted
from column 2 wells and diSpensed into column 3. The process was repeated through to
column 10. The final 100 pl. of diluted drug from column 10 was then discarded. Row 11
acted as a positive control (no compound, but organisms added), Row 12 acted as a
negative control (no compound, and no organisms .
100pL ofthe appropriate inoculurn suspension in the riate media, as per
CLSI guidelines, was added to the appropriate wells. This ed in a well containing
ZOOuL final volume (made up of IOOpL d compound or diluents and IOOnL of
inoculum or broth alone). All plates were ted in the dark under aerobic or
anaerobic conditions at 30-370C for 24-48 hours, according to the appropriate CLSI
ine. Plates were read visually 24-48 hours post inoculation. Endpoints of 100%
inhibition were determined (CLSI interpretation nts following visual examination).
MICso, MICgo, and 100% inhibition results are reported below in pig/ml. in the
following Tables, indicating each compound tested against a given s and strain:
Enterococcusfaecalis Bacillus cereus
ATCC29212 NCTC6349
DNM0610 as --
DNM0488
DNMO487 n—
DNMO477 --
DNM0566
DNM0576
DNMO466
W0 2012/116452
DNM0465
8 $0.25 SO 25. $0 25.
Vancomycin 2 2 1
Staplwhaoccus epidermidis Staphylocaccus epidermidis
NR5122 NRS7 g
H(D 00
”#HH
Staphylococcus aureus
NRSZ (ATCC700698)
DNM0466 1
a DNMOSOS ‘
DNM0547 .5
-. _O.5
DNM0537 -1
DNM0548 - - <0 25
Vancomycm - n
Staphylococcus eus Staphylococcus aureus
NRSI (ATCC700699) NR$382 :
100% so -
DNM0610 $0.25 $0.25 $0.25 m
DNM0488 $0.25 $0.25 $0.25 _
7 O. Ln 0.5 0.25
1 H
50.25 50-25
O Ln 0.5 —
1 H _
1 H
1 H O
D. 0'! 0.5 -
0.5 0.25 0.5 0.5
0.5 0.5 0.5 0.5
$0.25 $0.25 $0.25 $0.25
50.25 $0.25 O .
Staphylococcus aureus Staphylococcus aureus
NR5383 NR5384
————
0.5 0.5
2 1
—2 2
.5 1
Staphylococcus aureus Staphylococcus aureus
EUP SAU04D EUP MRSA004
% 100% . 4I
. -so.25-so.25-so.2s
é-Eso. 5 $0.25
1 III--
“In0-25
-‘-“
Staphylococcus aureus Staphylococcus aureus
EUP MRSAOOZ EUP MRSAOOZ
DNMOSlO -
DNMO488 I“
.— 2
l DNMOSGG so 25
W0 2012/116452
DNM0466
Compound
DNM0510
DNM0488
DNMD487
DNM0477
DNMDSGG
DNM0575 '
DNM0466 II
DNM0465
DNMOSOB
DNM0547
DNM0474 0.5 0.5 0.5
DNM0606 0.5 0.5 0.5
DNM0537 $0.25 50.25 $0.25
DNM0548 0.5 0.5
ycin 0
Staphylococus eus cs"
AUR59 7005 IAUR58 7005
DNM0510
DNM0488
DNM0487
DNM0477
DNM0576
DN M0466
DNMD465 1 1 1
—-——11
—-—“-.
_———--m
DNM0610 0.5 0.5 0.5 -1 --1
DNMD488 0.25 llkE0.25 IE 0.5
H H -2 2
-4 4
DNM0566 0 5 0.25 0.25 -0.5 0.5 0 U1
DNM0576 0.25 0.25 -1 1
— 2:-i 2 2
- !
0.5 0.5
1 1
H H 1 1
DNM0537 0.5 0.5 as 0 5 05 1
DNM0548 $0.25 $0.25 50.25 50 25 50.25 50.25
>16 >16 VHCh >16 >15
These s indicate that the compounds of present invention are potently antibacterial
t a variety of antibiotic—resistant strains, and in many cases (particularly with
respect to VRE), more potent than vancomycin.
Example 12
Measurement of minimum tory concentrations against
Streptococcus pneumoniae Group A
W0 2012/116452
Generally following the ure of Example 9, but using Todd Hewitt broth (beef heart
digest) rather than Mueller-Hinton broth, MICs were initially measured against
Streptococcuspneumoniae Group A for compounds of the present invention as follows:
8 <0.25 uM
DNM0576 0.5 uM
DNM0620 <0.25 pM
DNM0629 <0.25 uM
DNM0631 <0.25 uM
DNM0636 0.8 uM
DNM0640 <0.25 pM
Repeated measurement ofMIC ofthe above seven compounds in Todd Hewitt broth or in
CASO broth (casein, soybean) indicates the MIC range for these compounds is between
125 nM and 8 nM, the average MIC being 1.6 14M. These results te that the
compounds ofthe present invention have potent antibacterial s against
Streptococcus.
Claims (27)
1. A compound having a -containing ring, or prodrugs or pharmaceutically acceptable salts thereof, of one of Formulas I: R1 R3 N NH N S N R5 R10 (Ia) R1 R3 N NH N S N R5 N R6 R10 (Ib) in which E is –CH2– or is absent whereby the sulfur-containing ring is ly connected to R1, R2, R9, and R10, are each independently selected from the group ting of hydrogen, methyl, ethyl, propyl, cyclopropyl, butyl, cyclobutyl, pentyl, hexyl, isopropyl, isobutyl, neopentyl, y, and ethoxy; when the compound is a compound of Formula Ia, R11 is independently selected from the group consisting of hydrogen, methyl, ethyl, propyl, cyclopropyl, butyl, cyclobutyl, pentyl, hexyl, isopropyl, isobutyl, neopentyl, methoxy, and ethoxy; onally, R1 and R2 may connect to form a phenyl or benzofuran ring; additionally, R9 and R10 may connect to form a phenyl or benzofuran ring; R3 and R8 are each independently selected from the group consisting of hydrogen, methyl, ethyl, propyl, pyl, chlorine, fluorine, tert-butyl, methoxy, and ethoxy; R4 and R7 are each independently selected from the group consisting of hydrogen, chlorine, methyl ester, ethyl ester, methyl, ethyl, propyl, cyclopropyl, butyl, cyclobutyl, isopropyl, isobutyl, methoxy, and ethoxy; and R5 and R6 are each independently selected from the group consisting of hydrogen, cyclopentyl, cyclopropyl, furan, thiophene, trifluoromethyl, trifluoromethyl ether, methylthiol, formaldehyde, chlorine, ne, bromine, phenyl, methyl, ethyl, isopropyl, propyl, butyl, cyclobutyl, isobutyl, neopentyl, pentyl, methoxy, and ethoxy.
2. The compound of claim 1 in which the compound is according to Formula Ia; R1 and R2 are either independently selected from the group consisting of hydrogen and methyl, or form a phenyl ring whereby the ring system is naphthyl; R9 and R10 are either ndently selected from the group consisting of hydrogen and methyl, or form a phenyl ring whereby the ring system is naphthyl; R11 is hydrogen; R3 and R8 are each independently selected from the group consisting of hydrogen, methyl, chlorine, fluorine, isopropyl, utyl, and methoxy; R4 and R7 are each independently selected from the group consisting of hydrogen, , chlorine, and ethyl ester; and R5 and R6 are each independently selected from the group consisting of methyl, ethyl, , hydrogen, ne, isopropyl, cyclopentyl, bromine, cyclopropyl, trifluoromethyl, trifluoromethyl ether, methylthiol, formaldehyde, furan, and thiophene.
3. The compound of claim 2 in which E is absent.
4. The compound of claim 3 in which R1, R2, R4, R7, R9, and R10 are each
5. The compound of claim 4 in which R3 and R8 are each chlorine; and R5 and R6 are selected from the group consisting of hydrogen, methyl, and isopropyl.
6. 5-(4,5-bis(4-chloromethylphenyl)thiophenyl)-1H-tetrazole or a prodrug or pharmaceutically acceptable salt thereof.
7. 5-(4,5-bis(4-chloroisopropylphenyl)thiophenyl)-1H-tetrazole or a g or pharmaceutically acceptable salt thereof.
8. 5-(4-(3-butylphenyl)(4-chlorobenzyl)thiophenyl)-1H-tetrazole or a prodrug or pharmaceutically acceptable salt thereof.
9. 5-(4,5-bis(4-chloroisopropylphenyl)methylthiophenyl)-1H-tetrazole or a prodrug or pharmaceutically able salt thereof.
10. The compound of claim 1 in which the compound is selected from the group consisting of those compounds listed in or prodrugs or ceutically acceptable salts thereof.
11. A method of treatment of a microbial infection in a non-human mammal, comprising administering an effective amount of an antimicrobial compound of any one of the preceding claims to a non-human mammal in need thereof.
12. The method of treatment of claim 11 in which the microbial infection is ntially caused by Gram-positive bacteria.
13. The method of ent of claim 12 in which the microbial infection comprises lococcal infection.
14. A method of treatment of a microbial infection in a non-human mammal, comprising administering an effective amount of an antimicrobial adjuvant compound of any one of claims 1 to 10 and an effective amount of an antimicrobial compound to a non-human mammal in need thereof.
15. The method of treatment of claim 14 in which the microbial infection is substantially caused by Gram-negative ia.
16. The method of ent of claim 14 in which the microbial infection is substantially caused by ositive bacteria.
17. The method of treatment of claim 14 in which the microbial infection is polymicrobial.
18. The method of treatment of claim 14 in which the microbial infection is substantially caused by Pseudomonas aeruginosa.
19. Use of an antimicrobial compound of any one of claims 1 to 10 in the preparation of a medicament for the treatment of a microbial infection in a human patient.
20. The use of claim 19 in which the microbial infection is substantially caused by Gram-positive bacteria.
21. The use of claim 20 in which the microbial infection comprises Staphylococcal infection.
22. Use of an antimicrobial adjuvant compound of any one of claims 1 to 10 and an antimicrobial compound in the preparation of a medicament for the treatment of a microbial ion in a human patient.
23. The use of claim 22 in which the microbial infection is substantially caused by egative bacteria.
24. The use of claim 23 in which the microbial infection is substantially caused by Gram-positive bacteria.
25. The use of claim 23 in which the microbial infection is polymicrobial.
26. The use of claim 23 in which the ial infection is substantially caused by Pseudomonas aeruginosa.
27. A pharmaceutical composition comprising a compound of any one of claims 1- 10 and a pharmaceutically acceptable excipient.
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201161448682P | 2011-03-03 | 2011-03-03 | |
| US61/448,682 | 2011-03-03 | ||
| PCT/CA2012/050130 WO2012116452A1 (en) | 2011-03-03 | 2012-03-02 | Antimicrobial/adjuvant compounds and methods |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| NZ617418A NZ617418A (en) | 2015-02-27 |
| NZ617418B2 true NZ617418B2 (en) | 2015-05-28 |
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