NZ622558B2 - Hiv replication inhibitors - Google Patents
Hiv replication inhibitors Download PDFInfo
- Publication number
- NZ622558B2 NZ622558B2 NZ622558A NZ62255812A NZ622558B2 NZ 622558 B2 NZ622558 B2 NZ 622558B2 NZ 622558 A NZ622558 A NZ 622558A NZ 62255812 A NZ62255812 A NZ 62255812A NZ 622558 B2 NZ622558 B2 NZ 622558B2
- Authority
- NZ
- New Zealand
- Prior art keywords
- group
- alkyl
- aryl
- substituted
- cycloalkyl
- Prior art date
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- 239000006186 oral dosage form Substances 0.000 description 1
- 235000015205 orange juice Nutrition 0.000 description 1
- 235000005985 organic acids Nutrition 0.000 description 1
- 239000012044 organic layer Substances 0.000 description 1
- 239000012074 organic phase Substances 0.000 description 1
- WCPAKWJPBJAGKN-UHFFFAOYSA-N oxadiazole Chemical compound C1=CON=N1 WCPAKWJPBJAGKN-UHFFFAOYSA-N 0.000 description 1
- SJGALSBBFTYSBA-UHFFFAOYSA-N oxaziridine Chemical class C1NO1 SJGALSBBFTYSBA-UHFFFAOYSA-N 0.000 description 1
- 125000002971 oxazolyl group Chemical group 0.000 description 1
- 125000004430 oxygen atom Chemical group O* 0.000 description 1
- 235000019629 palatability Nutrition 0.000 description 1
- 238000007911 parenteral administration Methods 0.000 description 1
- 235000010603 pastilles Nutrition 0.000 description 1
- 235000020232 peanut Nutrition 0.000 description 1
- 230000005551 perinatal transmission Effects 0.000 description 1
- 239000003208 petroleum Substances 0.000 description 1
- 230000003285 pharmacodynamic effect Effects 0.000 description 1
- 239000012071 phase Substances 0.000 description 1
- 229950000688 phenothiazine Drugs 0.000 description 1
- DYUMLJSJISTVPV-UHFFFAOYSA-N phenyl propanoate Chemical compound CCC(=O)OC1=CC=CC=C1 DYUMLJSJISTVPV-UHFFFAOYSA-N 0.000 description 1
- WVDDGKGOMKODPV-ZQBYOMGUSA-N phenyl(114C)methanol Chemical compound O[14CH2]C1=CC=CC=C1 WVDDGKGOMKODPV-ZQBYOMGUSA-N 0.000 description 1
- 229940049953 phenylacetate Drugs 0.000 description 1
- WLJVXDMOQOGPHL-UHFFFAOYSA-N phenylacetic acid Chemical compound OC(=O)CC1=CC=CC=C1 WLJVXDMOQOGPHL-UHFFFAOYSA-N 0.000 description 1
- 229950009215 phenylbutanoic acid Drugs 0.000 description 1
- XNGIFLGASWRNHJ-UHFFFAOYSA-L phthalate(2-) Chemical compound [O-]C(=O)C1=CC=CC=C1C([O-])=O XNGIFLGASWRNHJ-UHFFFAOYSA-L 0.000 description 1
- LFSXCDWNBUNEEM-UHFFFAOYSA-N phthalazine Chemical compound C1=NN=CC2=CC=CC=C21 LFSXCDWNBUNEEM-UHFFFAOYSA-N 0.000 description 1
- 125000004592 phthalazinyl group Chemical group C1(=NN=CC2=CC=CC=C12)* 0.000 description 1
- XKJCHHZQLQNZHY-UHFFFAOYSA-N phthalimide Chemical compound C1=CC=C2C(=O)NC(=O)C2=C1 XKJCHHZQLQNZHY-UHFFFAOYSA-N 0.000 description 1
- 230000001766 physiological effect Effects 0.000 description 1
- 230000001885 phytohemagglutinin Effects 0.000 description 1
- 125000003386 piperidinyl group Chemical group 0.000 description 1
- 238000007747 plating Methods 0.000 description 1
- 229940068917 polyethylene glycols Drugs 0.000 description 1
- 229920005606 polypropylene copolymer Polymers 0.000 description 1
- 230000023603 positive regulation of transcription initiation, DNA-dependent Effects 0.000 description 1
- 229910000027 potassium carbonate Inorganic materials 0.000 description 1
- 229920001592 potato starch Polymers 0.000 description 1
- 230000003389 potentiating effect Effects 0.000 description 1
- 239000002244 precipitate Substances 0.000 description 1
- 238000002360 preparation method Methods 0.000 description 1
- 150000003141 primary amines Chemical class 0.000 description 1
- 230000008569 process Effects 0.000 description 1
- 125000004368 propenyl group Chemical group C(=CC)* 0.000 description 1
- 230000000069 prophylactic effect Effects 0.000 description 1
- 125000001436 propyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])[H] 0.000 description 1
- 235000013772 propylene glycol Nutrition 0.000 description 1
- UORVCLMRJXCDCP-UHFFFAOYSA-M propynoate Chemical compound [O-]C(=O)C#C UORVCLMRJXCDCP-UHFFFAOYSA-M 0.000 description 1
- 125000002568 propynyl group Chemical group [*]C#CC([H])([H])[H] 0.000 description 1
- 108090000623 proteins and genes Proteins 0.000 description 1
- CPNGPNLZQNNVQM-UHFFFAOYSA-N pteridine Chemical compound N1=CN=CC2=NC=CN=C21 CPNGPNLZQNNVQM-UHFFFAOYSA-N 0.000 description 1
- 125000001042 pteridinyl group Chemical group N1=C(N=CC2=NC=CN=C12)* 0.000 description 1
- 230000005180 public health Effects 0.000 description 1
- 125000000561 purinyl group Chemical group N1=C(N=C2N=CNC2=C1)* 0.000 description 1
- PBMFSQRYOILNGV-UHFFFAOYSA-N pyridazine Chemical compound C1=CC=NN=C1 PBMFSQRYOILNGV-UHFFFAOYSA-N 0.000 description 1
- 125000002098 pyridazinyl group Chemical group 0.000 description 1
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 1
- 125000000714 pyrimidinyl group Chemical group 0.000 description 1
- 125000000168 pyrrolyl group Chemical group 0.000 description 1
- 150000003242 quaternary ammonium salts Chemical class 0.000 description 1
- JWVCLYRUEFBMGU-UHFFFAOYSA-N quinazoline Chemical compound N1=CN=CC2=CC=CC=C21 JWVCLYRUEFBMGU-UHFFFAOYSA-N 0.000 description 1
- 125000002294 quinazolinyl group Chemical group N1=C(N=CC2=CC=CC=C12)* 0.000 description 1
- 125000005493 quinolyl group Chemical group 0.000 description 1
- 125000001567 quinoxalinyl group Chemical group N1=C(C=NC2=CC=CC=C12)* 0.000 description 1
- 230000002829 reductive effect Effects 0.000 description 1
- 238000010992 reflux Methods 0.000 description 1
- 230000004044 response Effects 0.000 description 1
- 229960001860 salicylate Drugs 0.000 description 1
- 229940116351 sebacate Drugs 0.000 description 1
- CXMXRPHRNRROMY-UHFFFAOYSA-L sebacate(2-) Chemical compound [O-]C(=O)CCCCCCCCC([O-])=O CXMXRPHRNRROMY-UHFFFAOYSA-L 0.000 description 1
- 230000001568 sexual effect Effects 0.000 description 1
- 239000012064 sodium phosphate buffer Substances 0.000 description 1
- 239000007909 solid dosage form Substances 0.000 description 1
- 239000008247 solid mixture Substances 0.000 description 1
- 235000011069 sorbitan monooleate Nutrition 0.000 description 1
- 239000001593 sorbitan monooleate Substances 0.000 description 1
- 229940035049 sorbitan monooleate Drugs 0.000 description 1
- 239000000600 sorbitol Substances 0.000 description 1
- 239000003549 soybean oil Substances 0.000 description 1
- 235000012424 soybean oil Nutrition 0.000 description 1
- 238000001228 spectrum Methods 0.000 description 1
- 230000001150 spermicidal effect Effects 0.000 description 1
- 239000003381 stabilizer Substances 0.000 description 1
- 239000008107 starch Substances 0.000 description 1
- 235000019698 starch Nutrition 0.000 description 1
- 229960001203 stavudine Drugs 0.000 description 1
- 238000003756 stirring Methods 0.000 description 1
- 239000011550 stock solution Substances 0.000 description 1
- 238000003860 storage Methods 0.000 description 1
- TYFQFVWCELRYAO-UHFFFAOYSA-L suberate(2-) Chemical compound [O-]C(=O)CCCCCCC([O-])=O TYFQFVWCELRYAO-UHFFFAOYSA-L 0.000 description 1
- 125000003107 substituted aryl group Chemical group 0.000 description 1
- 229940086735 succinate Drugs 0.000 description 1
- KDYFGRWQOYBRFD-UHFFFAOYSA-L succinate(2-) Chemical compound [O-]C(=O)CCC([O-])=O KDYFGRWQOYBRFD-UHFFFAOYSA-L 0.000 description 1
- 150000008163 sugars Chemical class 0.000 description 1
- BDHFUVZGWQCTTF-UHFFFAOYSA-M sulfonate Chemical compound [O-]S(=O)=O BDHFUVZGWQCTTF-UHFFFAOYSA-M 0.000 description 1
- 150000003467 sulfuric acid derivatives Chemical class 0.000 description 1
- 239000000829 suppository Substances 0.000 description 1
- 230000001629 suppression Effects 0.000 description 1
- 230000004083 survival effect Effects 0.000 description 1
- 239000003765 sweetening agent Substances 0.000 description 1
- 230000002195 synergetic effect Effects 0.000 description 1
- 239000006188 syrup Substances 0.000 description 1
- 235000020357 syrup Nutrition 0.000 description 1
- 239000000454 talc Substances 0.000 description 1
- 229910052623 talc Inorganic materials 0.000 description 1
- 235000012222 talc Nutrition 0.000 description 1
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- 125000003718 tetrahydrofuranyl group Chemical group 0.000 description 1
- 230000004797 therapeutic response Effects 0.000 description 1
- 125000000335 thiazolyl group Chemical group 0.000 description 1
- 239000002562 thickening agent Substances 0.000 description 1
- 125000001544 thienyl group Chemical group 0.000 description 1
- 229940113082 thymine Drugs 0.000 description 1
- 238000011200 topical administration Methods 0.000 description 1
- 235000010487 tragacanth Nutrition 0.000 description 1
- 239000000196 tragacanth Substances 0.000 description 1
- 229940116362 tragacanth Drugs 0.000 description 1
- WBYWAXJHAXSJNI-VOTSOKGWSA-M trans-cinnamate Chemical compound [O-]C(=O)\C=C\C1=CC=CC=C1 WBYWAXJHAXSJNI-VOTSOKGWSA-M 0.000 description 1
- 238000013518 transcription Methods 0.000 description 1
- 230000035897 transcription Effects 0.000 description 1
- QORWJWZARLRLPR-UHFFFAOYSA-H tricalcium bis(phosphate) Chemical compound [Ca+2].[Ca+2].[Ca+2].[O-]P([O-])([O-])=O.[O-]P([O-])([O-])=O QORWJWZARLRLPR-UHFFFAOYSA-H 0.000 description 1
- 235000011178 triphosphate Nutrition 0.000 description 1
- 239000001226 triphosphate Substances 0.000 description 1
- LENZDBCJOHFCAS-UHFFFAOYSA-N tris Chemical compound OCC(N)(CO)CO LENZDBCJOHFCAS-UHFFFAOYSA-N 0.000 description 1
- 229940035893 uracil Drugs 0.000 description 1
- 229960005486 vaccine Drugs 0.000 description 1
- 235000013311 vegetables Nutrition 0.000 description 1
- 239000003981 vehicle Substances 0.000 description 1
- 230000035899 viability Effects 0.000 description 1
- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 1
- 230000009385 viral infection Effects 0.000 description 1
- 210000002845 virion Anatomy 0.000 description 1
- 229940071104 xylenesulfonate Drugs 0.000 description 1
- XOOUIPVCVHRTMJ-UHFFFAOYSA-L zinc stearate Chemical compound [Zn+2].CCCCCCCCCCCCCCCCCC([O-])=O.CCCCCCCCCCCCCCCCCC([O-])=O XOOUIPVCVHRTMJ-UHFFFAOYSA-L 0.000 description 1
Classifications
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/495—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with two or more nitrogen atoms as the only ring heteroatoms, e.g. piperazine or tetrazines
- A61K31/505—Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim
- A61K31/513—Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim having oxo groups directly attached to the heterocyclic ring, e.g. cytosine
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/66—Phosphorus compounds
- A61K31/675—Phosphorus compounds having nitrogen as a ring hetero atom, e.g. pyridoxal phosphate
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K45/00—Medicinal preparations containing active ingredients not provided for in groups A61K31/00 - A61K41/00
- A61K45/06—Mixtures of active ingredients without chemical characterisation, e.g. antiphlogistics and cardiaca
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/12—Antivirals
- A61P31/14—Antivirals for RNA viruses
- A61P31/18—Antivirals for RNA viruses for HIV
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D239/00—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings
- C07D239/02—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings
- C07D239/20—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having two double bonds between ring members or between ring members and non-ring members
- C07D239/22—Heterocyclic compounds containing 1,3-diazine or hydrogenated 1,3-diazine rings not condensed with other rings having two double bonds between ring members or between ring members and non-ring members with hetero atoms directly attached to ring carbon atoms
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D417/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00
- C07D417/02—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing two hetero rings
- C07D417/04—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing two hetero rings directly linked by a ring-member-to-ring-member bond
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D417/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00
- C07D417/14—Heterocyclic compounds containing two or more hetero rings, at least one ring having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by group C07D415/00 containing three or more hetero rings
Abstract
Provided are dihydropyrimidinone-thiazole derivative compounds of the general formula I, wherein the variables are as defined in the specification. The compounds are inhibitors of the replication of Human Immunodeficiency Virus (HIV).
Description
N-NZ
HIV REPLICATION INHIBITORS
BACKGROUND
TECHNICAL FIELD
This disclosure generally relates to compounds and compositions, and methods of using these
compounds and compositions, as inhibitors of human immunodeficiency virus (HIV) replication,
and methods of treating patients infected with HIV, the causative agent of acquired
immunodeficiency syndrome (AIDS). The present disclosure also relates to pre-exposure
prophylaxis. In addition, the present disclosure relates to methods for fabricating compounds
according to the disclosure.
BACKGROUND INFORMATION
The human immunodeficiency virus (HIV) is the causative agent of acquired
immunodeficiency syndrome (AIDS), a life threatening disease for which there is no cure. Since
its discovery 30-years ago, there have been over 60 million people that have been infected with
HIV and 25 million have died of HIV related causes. As of 2009, there were an estimated 33.3
million people living with the disease and 1.8 million new infections worldwide per year .
The advent of highly active anti-retroviral therapy (HAART) for the chronic suppression
of virus replication has dramatically increased the mean survival time and improved quality of
life for individuals infected with HIV. More recently, pre-exposure prophylactic administration
of anti-retroviral therapy has been provided to healthy individuals at high risk of contracting the
disease to prevent infection. Pre-exposure prophylaxis (PrEP) studies have shown a reduction in
the rate of transmission to 1.7 in every 100 children in mother-to-child transmission and 44 out
of every 100 events in cohorts of men who have sex with men .
HIV is a positive sense RNA virus. The viral genome is ~ 10,000 bp and encodes viral
capsid, nucleocapsid, matrix, reverse transcriptase (RT), protease, envelope proteins (Gp120 &
Gp41), integrase, Tat, Rev, Vif, Vpu and Nef. A host cell is infected when HIV gp120 binds the
host CD4 receptor. Next, the virus binds the CCR5, or CXCR4, co-receptor and undergoes a
conformational change, forming a prefusion complex with the host cell, which folds to merge the
virus and host cell lipid membranes. Once inside the cell, the virus uncoats and the RT primes
5184N-NZ
the viral RNA genome for transcription of a DNA copy of the genome. The DNA copy of the
genome is integrated by the viral integrase into the host genome. The integrated genome is
transcribed by the host polymerase machinery and the virus protein Tat. The viral protein Rev
binds the newly transcribed full length RNA and the complex is exported from the nucleus into
the cytoplasm. In the cytoplasm, the viral genome is translated and processed by the viral
protease. The nucleocapsid and capsid surround the viral genome and the newly formed virion
buds from the infected cells.
There are over 30 FDA-approved drugs for the treatment of HIV. The viral proteins
successfully targeted by these drugs include RT, protease, gp41 and integrase. Inhibitors of the
HIV RT and proteases are the most numerous of the FDA-approved drugs. They are part of the
first and second line of treatment regimens . The current evidence supports the combination of
2 nucleoside reverse transcriptase inhibitors (NRTIs) and a potent third agent from another class
including non-nucleoside reverse transcriptase inhibitors (NNRTIs) . The use of NRTIs and
NNRTIs in PrEP has reduced transmission from an infected individual to non-infected
2, 4-6
individual . Specifically,
1. Nevaripine, AZT and lamivudine have been shown to prevent transmission from mother-
to-child ; and
2. Emtricidine and tenofovir have been shown to prevent infection in discordant sexual
2, 4
transmissions in an oral formulation in a cohort of men who have sex with men .
Drug resistance to the HIV anti-viral drugs is well documented and is summarized
biannually . In the absence of a preventative vaccine and/or cure, new infections and lifelong
anti-retroviral therapy will be a reality and mandates new antiviral agents to combat therapy
resistant viruses.
SUMMARY OF DISCLOSURE
According to a first aspect of the invention there is provided a compound represented
by the following Formula I:
5184N-NZ
wherein B is a heteroaryl group having heteroatoms selected from the group consisting of
nitrogen and sulphur atoms and wherein the heteroaryl is selected from the group consisting of a
4 to
7 membered monocyclic, a 7 to 11 membered bicyclic, and a 10 to 15 membered tricyclic ring
system, which has at least one heteroatom and at least one carbon atom in the ring; wherein each
ring of the heteroaryl group contains 1, 2 or 3 heteroatoms selected from nitrogen atoms and
sulfur atoms, where the nitrogen and sulfur heteroatoms may also optionally be oxidized and the
nitrogen heteroatoms may also optionally be quaternized;
W is O, S, or NR;
Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl,
C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR;
2 8 2 8 1 8 1 8 1 8
1 2 3
R, R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C -
1 8 1
C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, an aryl group, a heteroaryl
8 1 8 2-8 2-8
group, or heterocycle;
X is or ;
9 1 2
D and E are each individually selected from the group consisting of S, NR , CR or CR R ;
R is selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C cycloalkyl,
1 8 1 8 3 8
C -C alkenyl, C -C alkynyl, C -C aryl, C -C heterocycle each of which is optionally
2 8 2 8 5 10 5 10
11 12 11 11 12 11 12
substituted with halogen, -OR , -NR R , -SR , -S(O)R , -S(O) R , or -S(O) NR R
2 2 ;
4 5 6 7 8
R , R , R , R , and R are each are independently selected from H, hydroxyl, halogen, cyano,
11 11 12 11 12 13 12
NO , -OR , -SR , -S(O)R , -S(O) R , -S(O) NR R , C -C haloalkyl, COR , -C(O)OR , -
2 2 2 1 8
11 12 12 11 12 11 12 11 12 11 12
C(O)NR R , -C(O)R , -NR R , -NR C(O)R , -NR S(O) R , -NR C(O)OR , -B(OH) ,
C -C alkyl, C -C cycloalkyl, C -C alkenyl, C -C alkynyl, an aryl group, a heteroaryl group, -
1 8 3 8 2 8 2 8
12 11 12 12 11 12
alkylC(O)-OR , -alkylC(O)NR R , -alkenylC(O)OR , -alkenylC(O)NR R , -
12 11 12 11 12
aryl(CH ) C(O)OR , -aryl(CH ) C(O)NR R , -(CH ) C(O)NR S(O) R , -aryl(CH ) -
2 m 2 m 2 m 2 2 m
11 12 11 12 11 12
C(O)NR S(O) R , -(CH ) S(O) NR C(O)R , -aryl(CH ) S(O) NR C(O)R , or a
2 2 m 2 2 m 2
5184N-NZ
heterocycle group or a heteroaryl containing 1 to 4 heteroatoms, optionally substituted with 1 to
2 substituents selected from the group consisting of H, hydroxyl, halogen, CF , C -C alkyl, C -
3 1 8 1
C alkoxy, cyano, amino, C -C alkylamino, and C -C alkoxyC -C alkylamino provided at least
8 1 8 1 8 1 8
4 5 6 7 8
one of R , R , R , R , or R is other than hydrogen;
11 12 13
R , R , R , and R are each individually selected from the group consisting of H, C -C alkyl,
C -C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, an aryl group, a
1 8 1 8 2-8 2-8
heteroaryl group, or heterocycle;
m = 0 to 6;
pharmaceutically acceptable salts thereof; solvates thereof and deuterated forms thereof.
According to a second aspect of the invention there is provided a compound being
represented by the formula II
wherein B is selected from the group consisting of substituted or unsubstituted pyridinyl and
when substituted the substitution is halo or C -C alkoxy in the ortho position to the nitrogen in
the pyridinyl ring or can be halo in the meta position when the nitrogen is in the 2-position;
mono- substituted or unsubstituted quinolinyl and when substituted the substitution is hydroxyl;
mono-substituted or unsubstituted indolyl and when substituted the substitution is C -C alkyl;
unsubstituted benzothiopheneyl; unsubstituted thiopheneyl; and unsubstituted biphenyl;
Y is a direct bond or Y can be a C -C alkyl when R is CN;
R is H, C -C alkyl or C cycloalkyl;
1 6 3-8
R is H, C -C alkyl or C cycloalkyl;
1 6 3-8
R is H;
each of R and R is independently H, C -C alkyl or C cycloalkyl;
1 6 3-8
R is selected from the group consisting of CN, NO , aryloxy, and halo;
5184N-NZ
pharmaceutically acceptable salts thereof; solvates thereof and deuterated forms thereof.
According to third aspect of the invention there is provided use of compound
represented by the formula III
1 4 8
wherein R is H, C -C alkyl or C cycloalkyl; R and R are each independently H, C -C alkyl
1 6 3-8 1 6
or C cycloalkyl;
Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl,
C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR where R is
2 8 2 8 1 8 1 8 1 8
selected from the group consisting of: H, C -C alkyl, C -C haloalkyl, C -C , alkylaryl, C -C
1 8 1 8 1 8 2 8
alkenyl, C -C alkynyl, cycloalkyl, an aryl group, a heteroaryl group, or a heterocycle;
and B is selected from the group consisting of phenyl substituted with at least one member
selected from the group consisting hydroxyl, halo, C -C alkoxy, aryloxy; pyridyl substituted
with at least one member selected from the group consisting halo and C -C alkoxy and indolyl
substituted with a C -C alkyl group; pharmaceutically acceptable salts thereof; solvates thereof
and deuterated forms thereof.
According to fourth aspect of the invention there is provided use of compound being
selected from the group consisting of
5184N-NZ
5184N-NZ
5184N-NZ
5184N-NZ
5184N-NZ
5184N-NZ
and ;
pharmaceutically acceptable salts thereof; solvates thereof and deuterated forms thereof.
According to fifth aspect of the invention there is provided use of compound in
accordance with the fourth aspect being selected from the group consisting of
5184N-NZ
and ;
pharmaceutically acceptable salts thereof; solvates thereof and deuterated forms thereof.
According to sixth aspect of the invention there is provided use of a compound
represented by the following Formula I:
wherein B is selected from the group consisting of aryl, heteroaryl;
5184N-NZ
W is O, S, or NR;
Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl,
C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR;
2 8 2 8 1 8 1 8 1 8
1 2 3
R, R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C -
1 8 1
C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, an aryl group, a heteroaryl
8 1 8 2-8 2-8
group, or heterocycle;
X is or ;
9 1 2
D and E are each individually selected from the group consisting of O, S, NR , CR or CR R ;
R is selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C cycloalkyl,
1 8 1 8 3 8
C -C alkenyl, C -C alkynyl, C -C aryl, C -C heterocycle each of which is optionally
2 8 2 8 5 10 5 10
11 12 11 11 12 11 12
substituted with halogen, -OR , -NR R , -SR , -S(O)R , -S(O) R , or -S(O) NR R
2 2 ;
4 5 6 7 8
R , R , R , R , and R are each are independently selected from H, hydroxyl, halogen, cyano,
11 11 12 11 12 13 12
NO , -OR , -SR , -S(O)R , -S(O) R , -S(O) NR R , C -C haloalkyl, COR , -C(O)OR , -
2 2 2 1 8
11 12 12 11 12 11 12 11 12 11 12
C(O)NR R , -C(O)R , -NR R , -NR C(O)R , -NR S(O) R , -NR C(O)OR , -B(OH) ,
C -C alkyl, C -C cycloalkyl, C -C alkenyl, C -C alkynyl, an aryl group, a heteroaryl group,
1 8 3 8 2 8 2 8
substituted or unsubstituted aryl or heteroaryl wherein the substituion groups are selected from
hydroxyl, amino, alkylamino, arylamino, alkoxy, aryloxy, alkyl, heterocycle, halo, carboxy, acyl,
acyloxy, amido, nitro, cyano, sulfonic acid, sulfate, phosphonic acid, phosphate, and
12 11 12
phosphonate, or -alkylC(O)-OR , -alkylC(O)NR R , -
12 11 12 12
alkenylC(O)OR , -alkenylC(O)NR R , -aryl(CH ) C(O)OR , -
11 12 11 12 11 12
aryl(CH ) C(O)NR R , -(CH ) C(O)NR S(O) R , -aryl(CH ) -C(O)NR S(O) R , -
2 m 2 m 2 2 m 2
11 12 11 12
(CH ) S(O) NR C(O)R , -aryl(CH ) S(O) NR C(O)R , or substituted or unsubstituted
2 m 2 2 m 2
heterocycle or substituted or unsubstituted heteroaryl containing 1 to 4 heteroatoms, optionally
substituted with 1 to 2 substituents selected from the group consisting of H, hydroxyl, halogen,
CF , C -C alkyl, C -C alkoxy, cyano, amino, C -C alkylamino, and C -C alkoxyC -C
3 1 8 1 8 1 8 1 8 1 8
4 5 6 7 8
alkylamino provided at least one of R , R , R , R , or R is other than hydrogen;
11 12 13
R , R , R , and R are each individually selected from the group consisting of H, C -C alkyl,
C -C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, an aryl group, a
1 8 1 8 2-8 2-8
heteroaryl group, or heterocycle;
m = 0 to 6;
5184N-NZ
pharmaceutically acceptable salt thereof; solvate thereof and deuterated forms thereof in the
manufacture of a medicament for treating, preventing or inhibiting HIV virus.
According to another aspect of the invention there is provided use of compound in
accordance with the fourth aspect represented by the following Formula I:
wherein B is selected from the group consisting of; an aryl or heteroaryl group;
W is O, S, or NR;
Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl,
C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR;
2 8 2 8 1 8 1 8 1 8
1 2 3
R, R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C -
1 8 1
C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, substituted or unsubstituted
8 1 8 2-8 2-8
aryl, substituted or unsubstituted heteroaryl, or heterocycle;
X is or ;
9 1 2
D and E are each individually selected from the group consisting of O, S, NR , CR or CR R ;
R is selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C cycloalkyl,
1 8 1 8 3 8
C -C alkenyl, C -C alkynyl, C -C aryl, C -C heterocycle each of which is optionally
2 8 2 8 5 10 5 10
11 12 11 11 12 11 12
substituted with halogen, -OR , -NR R , -SR , -S(O)R , -S(O) R , or -S(O) NR R
2 2 ;
4 5 6 7 8
R , R , R , R , and R are each are independently selected from H, hydroxyl, halogen, cyano,
11 11 12 11 12 13 12
NO , -OR , -SR , -S(O)R , -S(O) R , -S(O) NR R , C -C haloalkyl, COR , -C(O)OR , -
2 2 2 1 8
11 12 12 11 12 11 12 11 12 11 12
C(O)NR R , -C(O)R , -NR R , -NR C(O)R , -NR S(O) R , -NR C(O)OR , -B(OH) ,
C -C alkyl, C -C cycloalkyl, C -C alkenyl, C -C alkynyl, substituted or unsubstituted aryl,
1 8 3 8 2 8 2 8
12 11 12
substituted or unsubstituted heteroaryl, -alkylC(O)-OR , -alkylC(O)NR R , -
12 11 12 12
alkenylC(O)OR , -alkenylC(O)NR R , -aryl(CH ) C(O)OR , -
11 12 11 12 11 12
aryl(CH ) C(O)NR R , -(CH ) C(O)NR S(O) R , -aryl(CH ) -C(O)NR S(O) R , -
2 m 2 m 2 2 m 2
11 12 11 12
(CH ) S(O) NR C(O)R , -aryl(CH ) S(O) NR C(O)R , or substituted or unsubstituted
2 m 2 2 m 2
5184N-NZ
heterocycle or substituted or unsubstituted heteroaryl containing 1 to 4 heteroatoms, optionally
substituted with 1 to 2 substituents selected from the group consisting of H, hydroxyl, halogen,
CF , C -C alkyl, C -C alkoxy, cyano, amino, C -C alkylamino, and C -C alkoxyC -C
3 1 8 1 8 1 8 1 8 1 8
4 5 6 7 8
alkylamino provided at least one of R , R , R , R , or R is other than hydrogen;
11 12 13
R , R , R , and R are each individually selected from the group consisting of H, C -C alkyl,
C -C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, aryl, heteroaryl, or
1 8 1 8 2-8 2-8
heterocycle;
m = 0 to 6;
pharmaceutically acceptable salt thereof; solvate thereof and deuterated form thereof in the
manufacture of a medicament for treating, prevention or inhibiting HIV-1 replication.
Disclosed are certain compounds that prevent the replication of HIV-1. Compounds
according to preferred aspects of this disclosure have been identified that inhibit the replication
of HIV-1 in a dose-dependent manner in cell culture assays, and confirmed to dose-dependently
inhibit HIV replication in peripheral blood mononuclear cells (PBMC) utilizing a viral RT end-
point.
In another embodiment of the present disclosure compounds are provided which inhibit
HIV replication through a mechanism of action that involves inhibiting the viral RT enzyme. The
compounds of preferred embodiments of the invention have activity against HIV-1 .
Ba-L
In another preferred embodiment of the present disclosure compounds are provided
which inhibit the replication of HIV strains resistant to NNRTIs. Compounds in this disclosure
inhibit, A17, an HIV-1 virus with mutations in the RT non-nucleoside binding pocket, K103N
and Y181C, in a dose-dependent susceptibility testing manner. Compounds of the present
disclosure exhibit good stability.
The disclosure provides preferred compounds and compositions, and methods of using
these compounds and compositions, as inhibitors of human immunodeficiency virus (HIV)
replication. The disclosed compounds and compositions are useful for treating patients infected
with HIV, the causative agent of acquired immunodeficiency syndrome (AIDS).
5184N-NZ
Thus, in one preferred embodiment this disclosure provides compounds of
Formula I:
wherein B is selected from the group consisting of substituted or unsubstituted aryl, substituted
or unsubstituted heteroaryl;
W is O, S, or NR;
Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl,
C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR;
2 8 2 8 1 8 1 8 1 8
1 2 3
R, R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C -
1 8 1
C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, substituted or unsubstituted
8 1 8 2-8 2-8
aryl, substituted or unsubstituted heteroaryl, or heterocycle;
X is or ;
9 1 2
D and E are each individually selected from the group consisting of O, S, NR , CR or CR R ;
R is selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C cycloalkyl,
1 8 1 8 3 8
C -C alkenyl, C -C alkynyl, C -C aryl, C -C heterocycle each of which is optionally
2 8 2 8 5 10 5 10
11 12 11 11 12 11 12
substituted with halogen, -OR , -NR R , -SR , -S(O)R , -S(O) R , or -S(O) NR R
2 2 ;
4 5 6 7 8
R , R , R , R , and R are each are independently selected from H, hydroxyl, halogen, cyano,
11 11 12 11 12 13 12
NO , -OR , -SR , -S(O)R , -S(O) R , -S(O) NR R , C -C haloalkyl, COR , -C(O)OR , -
2 2 2 1 8
11 12 12 11 12 11 12 11 12 11 12
C(O)NR R , -C(O)R , -NR R , -NR C(O)R , -NR S(O) R , -NR C(O)OR , -B(OH) ,
C -C alkyl, C -C cycloalkyl, C -C alkenyl, C -C alkynyl, substituted or unsubstituted aryl,
1 8 3 8 2 8 2 8
12 11 12
substituted or unsubstituted heteroaryl, -alkylC(O)-OR , -alkylC(O)NR R , -
12 11 12 12
alkenylC(O)OR , -alkenylC(O)NR R , -aryl(CH ) C(O)OR , -
11 12 11 12 11 12
aryl(CH ) C(O)NR R , -(CH ) C(O)NR S(O) R , -aryl(CH ) -C(O)NR S(O) R , -
2 m 2 m 2 2 m 2
11 12 11 12
(CH ) S(O) NR C(O)R , -aryl(CH ) S(O) NR C(O)R , or substituted or unsubstituted
2 m 2 2 m 2
heterocycle or substituted or unsubstituted heteroaryl containing 1 to 4 heteroatoms, optionally
substituted with 1 to 2 substituents selected from the group consisting of H, hydroxyl, halogen,
5184N-NZ
CF , C -C alkyl, C -C alkoxy, cyano, amino, C -C alkylamino, and C -C alkoxyC -C
3 1 8 1 8 1 8 1 8 1 8
4 5 6 7 8
alkylamino provided at least one of R , R , R , R , or R is other than hydrogen;
11 12 13
R , R , R , and R are each individually selected from the group consisting of H, C -C alkyl,
C -C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, substituted or
1 8 1 8 2-8 2-8
unsubstituted aryl, substituted or unsubstituted heteroaryl, or heterocycle;
m = 0 to 6;
wherein alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or heterocycle may be substituted or
unsubstituted;
pharmaceutically acceptable salt thereof; solvate thereof and deuterated form thereof
In another preferred embodiment, the disclosure provides a method for inhibiting HIV-1
replication in patients by administering an effective HIV-1 replication inhibiting amount of a
compound of Formula I, pharmaceutically acceptable salt thereof or solvate thereof to a subject
in need thereof. According to this preferred embodiment, the disclosure provides compounds that
inhibit HIV-1 replication as demonstrated by reduction in virus released from Magi-CCR5 and
PBMCs (RT end-point). Compounds of the invention act by inhibiting the HIV-1 RT as
demonstrated by the ability to inhibit RT activity in a biochemical assay. Preferred compounds
of the present disclosure act by inhibiting HIV strains resistant to NNRTI’s.
In another preferred embodiment, the disclosure provides a method for treating patients
infected with HIV/AIDS, either by administering a compound of Formula I, pharmaceutically
acceptable salt thereof or solvates thereof to a subject in need thereof alone or in combination
with existing standard of care treatments (NRTIs, NNRTIs, protease inhibitors, integrase
inhibitors, CCR5 antagonists and the like).
In another preferred embodiment, the disclosure provides a pre-exposure prophylaxis
method for treating a patient and for the prevention of transmission from an infected person to an
uninfected person by administering to a patient in need thereof a therapeutically effective amount
of a compound of Formula I, pharmaceutically acceptable salt thereof or solvate thereof.
Examples of prophylaxis treatments are treating a pregnant women or one in labor, who has been
infected to protect the unborn; treating women who are nursing to protect the child, and
prevention of infection in same sex and hetero sex relations.
5184N-NZ
Still other objects and advantages of the present disclosure will become readily apparent
by those skilled in the art from the following detailed description, wherein it is shown and
described only the preferred embodiments, simply by way of illustration of the best mode. As
will be realized, the disclosure is capable of other and different embodiments, and its several
details are capable of modifications in various obvious respects, without departing from the
disclosure. Accordingly, the description is to be regarded as illustrative in nature and not as
restrictive.
BEST AND VARIOUS MODES FOR CARRYING OUT DISCLOSURE
Preferred compounds according this disclosure can be represented by the following
Formula I:
wherein B is selected from the group consisting of substituted or unsubstituted aryl, substituted
or unsubstituted heteroaryl;
W is O, S, or NR;
Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl,
C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR;
2 8 2 8 1 8 1 8 1 8
1 2 3
R, R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C -
1 8 1
C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, substituted or unsubstituted
8 1 8 2-8 2-8
aryl, substituted or unsubstituted heteroaryl, or heterocycle;
X is or ;
9 1 2
D and E are each individually selected from the group consisting of O, S, NR , CR or CR R ;
R is selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C cycloalkyl,
1 8 1 8 3 8
C -C alkenyl, C -C alkynyl, C -C aryl, C -C heterocycle each of which is optionally
2 8 2 8 5 10 5 10
11 12 11 11 12 11 12
substituted with halogen, -OR , -NR R , -SR , -S(O)R , -S(O) R , or -S(O) NR R
2 2 ;
4 5 6 7 8
R , R , R , R , and R are each are independently selected from H, hydroxyl, halogen, cyano,
11 11 12 11 12 13 12
NO , -OR , -SR , -S(O)R , -S(O) R , -S(O) NR R , C -C haloalkyl, COR , -C(O)OR , -
2 2 2 1 8
5184N-NZ
11 12 12 11 12 11 12 11 12 11 12
C(O)NR R , -C(O)R , -NR R , -NR C(O)R , -NR S(O) R , -NR C(O)OR , -B(OH) ,
C -C alkyl, C -C cycloalkyl, C -C alkenyl, C -C alkynyl, substituted or unsubstituted aryl,
1 8 3 8 2 8 2 8
12 11 12
substituted or unsubstituted heteroaryl, -alkylC(O)-OR , -alkylC(O)NR R , -
12 11 12 12
alkenylC(O)OR , -alkenylC(O)NR R , -aryl(CH ) C(O)OR , -
11 12 11 12 11 12
aryl(CH ) C(O)NR R , -(CH ) C(O)NR S(O) R , -aryl(CH ) -C(O)NR S(O) R , -
2 m 2 m 2 2 m 2
11 12 11 12
(CH ) S(O) NR C(O)R , -aryl(CH ) S(O) NR C(O)R , or substituted or unsubstituted
2 m 2 2 m 2
heterocycle or substituted or unsubstituted heteroaryl containing 1 to 4 heteroatoms, optionally
substituted with 1 to 2 substituents selected from the group consisting of H, hydroxyl, halogen,
CF , C -C alkyl, C -C alkoxy, cyano, amino, C -C alkylamino, and C -C alkoxyC -C
3 1 8 1 8 1 8 1 8 1 8
4 5 6 7 8
alkylamino provided at least one of R , R , R , R , or R is other than hydrogen;
11 12 13
R , R , R , and R are each individually selected from the group consisting of H, C -C alkyl,
C -C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, substituted or
1 8 1 8 2-8 2-8
unsubstituted aryl, substituted or unsubstituted heteroaryl, or heterocycle;
m = 0 to 6;
wherein alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or heterocycle may be substituted or
unsubstituted;
pharmaceutically acceptable salt thereof; solvate thereof and deuterated form thereof .
According to certain more preferred embodiments, the present disclosure relates to
compounds represented by formula II:
wherein B is selected from the group consisting of substituted or unsubstituted pyridinyl and
when substituted the substitution is halo or C -C alkoxy in the ortho position to the nitrogen in
the pyridinyl ring or can be halo in the meta position when the nitrogen is in the 2-position;
mono- substituted or unsubstituted quinolinyl and when substituted the substitution is hydroxyl;
5184N-NZ
mono-substituted or unsubstituted indolyl and when substituted the substitution is C -C alkyl;
unsubstituted benzothiopheneyl; unsubstituted thiopheneyl; mono-substituted, or di- substituted
or unsubstituted phenyl and when substituted the substitution is selected from the group
consisting of hydroxyl, halo, CN, CF , C -C alkoxy, and aryloxy; provided that when the phenyl
3 1 4
is di- substituted the substitutions are located ortho to each other; and unsubstituted biphenyl;
Y is a direct bond or Y can be a C -C alkyl when R is CN;
R is H, C -C alkyl or C cycloalkyl and more typically is H or C -C alkyl;
1 6 3-8 1 6
R is H, C -C alkyl or C cycloalkyl and more typically is H or C -C alkyl;
1 6 3-8 1 6
R is H;
each of R and R is independently H, C -C alkyl or C cycloalkyl and more typically is H or
1 6 3-8
C -C alkyl;
R is selected from the group consisting of CN, NO , aryloxy, and halo;
pharmaceutically acceptable salts thereof; solvates thereof and deuterated form thereof.
Still other aspects to the present disclosure relate to compounds represented by formula
III:
wherein R is H, C -C alkyl or C cycloalkyl, more typically C -C alkyl and even more
1 6 3-8 1 6
typically methyl; R and R are each independently H, C -C alkyl or C cycloalkyl;
1 6 3-8
and B is selected from the group consisting of phenyl substituted with at least one member
selected from the group consisting hydroxyl, halo, C -C alkoxy, aryloxy; pyridyl substituted
with at least one member selected from the group consisting halo and C -C alkoxy and indolyl
substituted with a C -C alkyl group.
5184N-NZ
The term “alkyl” refers to straight or branched chain unsubstituted hydrocarbon groups of
typically 1 to 22 carbon atoms, more typically 1 to 8 carbon atoms, even more typically 1 to 6
carbon atoms and even still more typically 1 to 4 carbon atoms .
Examples of suitable alkyl groups include methyl, ethyl and propyl. Examples of
branched alkyl groups include isopropyl and t-butyl.
The alkoxy group typically contains 1 to 6 carbon atoms. Suitable alkoxy groups
typically contain 1-6 carbon atoms and include methoxy, ethoxy, propoxy and butoxy.
Examples of halo groups are Cl, F, Br and I.
The term “aryl” refers to monocyclic or bicyclic aromatic hydrocarbon groups having 6
to 12 carbon atoms in the ring portion, such as phenyl, naphthyl, biphenyl, and diphenyl groups.
The aryl can be optionally substituted as described above for aryl, including substituted with one
or more substituents selected from hydroxyl, amino, alkylamino, arylamino, alkoxy, aryloxy,
alkyl, heterocycle, halo, carboxy, acyl, acyloxy, amido, nitro, cyano, sulfonic acid, sulfate,
phosphonic acid, phosphate, or phosphonate, either unprotected, or protected as necessary, as
known to those skilled in the art, for example, as taught in Greene, et al., Protective Groups in
Organic Synthesis, John Wiley and Sons, Second Edition, 1991.
The term “cycloalkyl” refers cyclic hydrocarbon ring systems typically containing 3-8
carbon atoms and more typically 3 to 6 carbon atoms, with typical examples being cyclopropyl,
cyclobutyl, cyclopentyl, and cyclohexyl.
Suitable alkenyl groups typically contain 2-8 carbon atoms, more typically 2-6 carbon
atoms and include ethenyl and propenyl.
Suitable alkynyl groups typically contain 2-8 carbon atoms, more typically 2-6 carbon
atoms and include ethynyl and propynyl.
The terms "heterocycle", "heterocyclic" and "heterocyclo" refer to an optionally
substituted, fully saturated or unsaturated, aromatic or nonaromatic cyclic group, for example,
which is a 4 to 7 membered monocyclic, 7 to 11 membered bicyclic, or 10 to 15 membered
tricyclic ring system, which has at least one heteroatom and at least one carbon atom in the ring.
5184N-NZ
Each ring of the heterocyclic group containing a heteroatom may have 1, 2 or 3 heteroatoms
selected from nitrogen atoms, oxygen atoms and sulfur atoms, where the nitrogen and sulfur
heteroatoms may also optionally be oxidized and the nitrogen heteroatoms may also optionally
be quaternized. The heterocyclic group may be attached at any heteroatom or carbon atom.
Examples of heterocycles and heteroaryls include, but are not limited to, azetidine, pyrrole,
imidazole, pyrazole, pyridine, pyrazine, pyrimidine, pyridazine, indolizine, isoindole, indole,
dihydroindole, indazole, purine, quinolizine, isoquinoline, quinoline, phthalazine,
naphthylpyridine, quinoxaline, quinazoline, cinnoline, pteridine, carbazole, carboline,
phenanthridine, acridine, phenanthroline, isothiazole, phenazine, isoxazole, phenoxazine,
phenothiazine, imidazolidine, imidazoline, piperidine, piperazine, indoline, phthalimide, 1,2, 3,4-
tetrahydroisoquinoline, 4,5, 6,7-tetrahydrobenzo [b] thiophene, thiazole, thiazolidine, thiophene,
benzo [b] thiophene, morpholinyl, thiomorpholinyl (also referred to as thiamorpholinyl),
piperidinyl, pyrrolidine, tetrahydrofuranyl, furyl, furanyl, pyridyl, pyrimidyl, thienyl,
isothiazolyl, imidazolyl, tetrazolyl, pyrazinyl, benzofuranyl, benzothiophenyl, quinolyl,
isoquinolyl, benzothienyl, isobenzofuryl, pyrazolyl, indolyl, isoindolyl, benzimidazolyl, purinyl,
carbazolyl, oxazolyl, thiazolyl, isothiazolyl, 1,2,4-thiadiazolyl, isooxazolyl, pyrrolyl,
quinazolinyl, cinnolinyl, phthalazinyl, xanthinyl, hypoxanthinyl, thiophene, furan, isopyrrole,
1,2,3-triazole, 1,2,4-triazole, oxazole, thiazole, pyrimidine, aziridines, thiazole, 1,2,3-oxadiazole,
thiazine, pyrrolidine, oxaziranes, morpholinyl, pyrazolyl, pyridazinyl, pyrazinyl, quinoxalinyl,
xanthinyl, hypoxanthinyl, pteridinyl, 5-azacytidinyl, 5-azauracilyl, triazolopyridinyl,
imidazolopyridinyl, pyrrolopyrimidinyl, pyrazolopyrimidinyl, adenine, N6-alkylpurines, N6-
benzylpurine, N6-halopurine, N6-vinypurine, N6-acetylenic purine, N6-acyl purine, N6-
hydroxyalkyl purine, N6-thioalkyl purine, thymine, cytosine, 6-azapyrimidine, 2-
mercaptopyrmidine, uracil, N5-alkyl-pyrimidines, N5-benzylpyrimidines, N5-halopyrimidines,
N5-vinyl-pyrimidine, N5-acetylenic pyrimidine, N5-acyl pyrimidine, N5-hydroxyalkyl purine,
and N6-thioalkyl purine, and isoxazolyl. The heteroaromatic and heterocyclic moieties can be
optionally substituted as described above for aryl, including substituted with one or more
substituents selected from hydroxyl, amino, alkylamino, arylamino, alkoxy, aryloxy, alkyl,
heterocycle, halo, carboxy, acyl, acyloxy, amido, nitro, cyano, sulfonic acid, sulfate, phosphonic
acid, phosphate, or phosphonate, either unprotected, or protected as necessary, as known to those
skilled in the art, for example, as taught in Greene, et al., Protective Groups in Organic
Synthesis, John Wiley and Sons, Second Edition, 1991.
5184N-NZ
The term “cyclic group” is used herein to refer to either aryl groups, non-aryl groups (i.e.,
cycloalkyl, heterocycloalkyl, cycloalkenyl, and heterocycloalkenyl groups), or both. Cyclic
groups have one or more ring systems that can be substituted or unsubstituted. A cyclic group
can contain one or more aryl groups, one or more non-aryl groups, or one or more aryl groups
and one or more non-aryl groups. Also, the cyclic group can optionally be substituted as
described above for aryl and heterocyclic.
It is understood that the compounds of the present disclosure relate to all optical isomers
and stereo-isomers at the various possible atoms of the molecule, unless specified otherwise.
Compounds may be separated or prepared as their pure enantiomers or diasteriomers by
crystallization, chromatography or synthesis.
The deuterated forms contain heavy hydrogen including deuterium. The carbon labeled
forms may contain carbon 13.
"Pharmaceutically acceptable salts" refer to derivatives of the disclosed compounds
wherein the parent compound is modified by making acid or base salts thereof. The compounds
of this disclosure form acid and base addition salts with a wide variety of organic and inorganic
acids and bases and includes the physiologically acceptable salts which are often used in
pharmaceutical chemistry. Such salts are also part of this disclosure. Typical inorganic acids
used to form such salts include hydrochloric, hydrobromic, hydroiodic, nitric, sulfuric,
phosphoric, hypophosphoric and the like. Salts derived from organic acids, such as aliphatic
mono and dicarboxylic acids, phenyl substituted alkanoic acids, hydroxyalkanoic and
hydroxyalkandioic acids, aromatic acids, aliphatic and aromatic sulfonic acids, may also be used.
Such pharmaceutically acceptable salts thus include acetate, phenylacetate, trifluoroacetate,
acrylate, ascorbate, benzoate, chlorobenzoate, dinitrobenzoate, hydroxybenzoate,
methoxybenzoate, methylbenzoate, o-acetoxybenzoate, naphthalenebenzoate, bromide,
isobutyrate, phenylbutyrate, β-hydroxybutyrate, butyne-1,4-dioate, hexyne-1,4-dioate, cabrate,
caprylate, chloride, cinnamate, citrate, formate, fumarate, glycollate, heptanoate, hippurate,
lactate, malate, maleate, hydroxymaleate, malonate, mandelate, mesylate, nicotinate,
isonicotinate, nitrate, oxalate, phthalate, teraphthalate, phosphate, monohydrogenphosphate,
dihydrogenphosphate, metaphosphate, pyrophosphate, propiolate, propionate, phenylpropionate,
salicylate, sebacate, succinate, suberate, sulfate, bisulfate, pyrosulfate, sulfite, bisulfite,
5184N-NZ
sulfonate, benzene-sulfonate, p-bromobenzenesulfonate, chlorobenzenesulfonate,
ethanesulfonate, 2-hydroxyethanesulfonate, methanesulfonate, naphthalenesulfonate,
naphthalenesulfonate, p-toleunesulfonate, xylenesulfonate, tartarate, and the like.
Bases commonly used for formation of salts include ammonium hydroxide and alkali and
alkaline earth metal hydroxides, carbonates, as well as aliphatic and primary, secondary and
tertiary amines, aliphatic diamines. Bases especially useful in the preparation of addition salts
include sodium hydroxide, potassium hydroxide, ammonium hydroxide, potassium carbonate,
methylamine, diethylamine, and ethylene diamine.
“Solvates” refers to the compound formed by the interaction of a solvent and a solute and
includes hydrates. Solvates are usually crystalline solid adducts containing solvent molecules
within the crystal structure, in either stoichiometric or non-stoichiometric proportions.
The terms "effective amount" or “therapeutically effective amount” refer to an amount of
the compound of preferred embodiments of the invention sufficient to provide a benefit in the
treatment or prevention of viral disease, to delay or minimize symptoms associated with viral
infection or viral-induced disease, or to cure or ameliorate the disease or infection or cause
thereof. In particular, a therapeutically effective amount means an amount sufficient to provide a
therapeutic benefit in vivo. Used in connection with an amount of a compound of the disclosure,
the term preferably encompasses a non-toxic amount that improves overall therapy, reduces or
avoids symptoms or causes of disease, or enhances the therapeutic efficacy of or synergies with
another therapeutic agent.
The term "treating" refers to relieving the disease, disorder, or condition, i.e., causing
regression of the disease, disorder, and/or condition. The term “preventing” refers to preventing a
disease, disorder, or condition from occurring in a human or an animal that may be predisposed
to the disease, disorder and/or condition, but has not yet been diagnosed as having it; and/or
inhibiting the disease, disorder, or condition, i.e., arresting its development.
The compounds of preferred embodiments of the present invention may be prepared by
those skilled in the art of chemical synthesis. For example, methods of preparing compounds of
5184N-NZ
the preferred embodiments of the present invention include, but are not limited to, the synthetic
chemistry procedures shown in Schemes 1 and 2:
Scheme 1. Synthesis of cyclohexyl-substituted 5-(thiazolyl)-3,4-dihydropyrimidin-2(1H)-
ones.
Scheme 2. Synthesis of substituted 5-(1,2,4-Oxadiazolyl)-3,4-dihydropyrimidin-2(1H)-
thiones.
The following non-limiting examples are presented to further illustrate the present
invention, by way of example only.
EXAMPLES
All reactions were carried out using oven-dried glassware and conducted under a positive
pressure of nitrogen unless otherwise specified. NMR spectra were recorded on a JEOL JNM-
CS400 (400 MHz) spectrometer. High resolution mass spectra were obtained on an Agilent mass
spectrometer using ESI-TOF at the Scripps Research Institute Mass Spectrometry Laboratory.
LC/MS analyses were carried out on a Shimadzu LC/MS 2010 Series LC System with a
Kromasil 100 5 micron C18 column (50 x 2.1 mmID). Silica gel purifications were accomplished
using a CombiFlash R system from Teledyne Isco using RediSep R pre-packed columns.
Preparative HPLC purifications were achieved using a Shimadzu SCL-10A system using either a
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Luna 5 micron C18 column (100 x 30 mmID) or a YMC 10 micron C18 column (150 x 20
mmID). All reagents as solvents were used as received from standard suppliers. Microfluidic
experiments were conducted using a Syrris AFRICA® synthesis station.
A) The following is an overview for the synthesis of 5-(thiazolyl)-3,4-dihydropyrimidin-
2(1H)-ones
Scheme 3. Synthesis of 5-(thiazolyl)-3,4-dihydropyrimidin-2(1H)-ones either by Method A
(one-pot batch mode) or Method B (automated continuous flow) .
B) The following is an overview for the synthesis of ketal-protected thioamide
Scheme 4. Synthesis of ketal-protected thioamide building block.
C) Experimental procedures for the synthesis of ketal-protected thioamide including
characterization data
EXAMPLE 1
To a vacuum dried solid mixture of acetoacetamide (5.05 g, 50.0 mmol, 1 equiv) and
neopentyl glycol (11.0 g, 110 mmol, 2.2 equiv) was added anhydrous CH Cl (200 mL) followed
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by chlorotrimethylsilane (28.0 mL, 220 mmol, 4.4 equiv). The resulting clear solution was
heated to reflux for 2 days. The resulting cloudy reaction mixture was cooled to 0 °C, carefully
quenched with portion-wise addition of saturated aqueous NaHCO , and the resulting biphasic
mixture separated. Then, the organic layer was washed with brine, dried using Na SO , and
concentrated to dryness in vacuo. The resulting clear oil was loaded onto a pre-packed silica gel
column (120 g) using CH Cl and chromatographed using CH Cl :MeOH (85 mL/min, 100%
2 2 2 2
CH Cl for 5 min, then ramping to 20% MeOH over 20 min). Following concentration of
product eluents, the ketal-protected amide (8.35 g, 89%) was isolated as a clear oil which slowly
1 15
became white crystals over time. H NMR consistent with literature reported spectrum.
EXAMPLE 2
A solution of ketal-protected amide (5.81 g, 31.1 mmol, 1 equiv) in anhydrous THF was
prepared and cooled to 0 °C. Lawesson’s reagent (6.91 g, 17.1 mmol, 0.55 equiv) was then
added and the resulting yellow suspension was allowed to naturally warm to room temperature,
stirring for a total of 2 hrs. The resulting yellow solution was concentrated in vacuo and re-
dissolved in EtOAc. Then, the organic phase was washed with saturated aqueous NaHCO
followed by brine, dried using Na SO , and concentrated to dryness in vacuo. The crude material
was adsorbed onto silica gel, loaded onto a pre-packed silica gel column (120 g), and
chromatographed using hexanes:EtOAc (85 mL/min, 0% EtOAc to 30% EtOAc over 60 min).
Following concentration of product eluents, the resulting white solid still required further
purification. Thus, the chromatographed material was treated with toluene (50 mL), cooled to -20
°C, and the resulting white precipitate collected to provide the ketal-protected thioamide (2.70 g,
43%) as white crystals. Mp 111-113 °C. H NMR (400 MHz, CDCl ): δ (ppm) 8.25 (s, 1H), 7.85
(s, 1H), 3.63 (d, J = 11.0 Hz, 2H), 3.44 (d, J = 11.0 Hz, 2H), 3.16 (s, 2H), 1.46 (s, 3H), 1.06 (s,
3H), 0.84 (s, 3H). C NMR (100 MHz, CDCl ): δ (ppm) 205.0, 98.2, 54.0, 30.1, 23.1, 22.4,
18.8. HRMS (ESI): m/z calcd for C H NO S (M + H) 204.1053, found (M + H) 204.1050.
9 18 2
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D) General experimental procedure for the one-pot batch mode synthesis (Method A) of 5-
(thiazolyl)-3,4-dihyrdopyrimidin-2(1H)-ones and characterization data
Scheme 5. One-pot synthesis of 5-(thiazolyl)-3,4-dihydrpyrimidin-2(1H)-ones.
General procedure: Reaction mixtures of ketal-protected thioamide (50 mg, 0.246 mmol, 1
equiv) and α-bromoketone (0.246 mmol) were prepared in 600 µL of DMF and heated to 150 °C
for 5 min in sealed vials. After cooling, aldehyde (0.295 mmol, 1.2 equiv) and urea (0.295 mmol,
1.2 equiv) were added and the reaction mixtures heated to 200 °C for an additional 10 min. Once
cooled, the crude reaction mixtures were adsorbed onto silica gel, loaded onto a pre-packed silica
gel column (12 g), and chromatographed using hexanes:EtOAc (30 mL/min, 10% EtOAc to
100% EtOAc over 20 min). Then, an additional purification step using reverse-phase preparative
HPLC was carried out on all compounds before screening for anti-HIV activity.
EXAMPLE 3
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Title compound was isolated as a white solid (43 mg, 43%). H NMR (400 MHz, DMSO-
d ): δ (ppm) 9.27 (d, J = 1.8 Hz, 1H), 8.41 (d, J = 2.3 Hz, 1H), 8.23 (s, 1H), 8.08 (m, 2H), 7.88
(m, 3H), 7.78 (dd, J = 8.2, 2.8 Hz, 1H), 7.47 (d, J = 8.2 Hz, 1H), 5.71 (d, J = 3.2 Hz, 1H), 2.34
(s, 3H).
EXAMPLE 4
Title compound was isolated as a yellow solid (35 mg, 35%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.27 (d, J = 1.4 Hz, 1H), 8.27 (dd, J = 4.6, 1.8 Hz, 1H), 8.19 (s, 1H), 8.05
(m, 2H), 7.89 (m, 1H), 7.85 (m, 2H), 7.78 (dd, J = 7.6, 2.1 Hz, 1H), 7.36 (dd, J = 7.8, 4.6 Hz,
1H), 5.99 (d, J = 3.2 Hz, 1H), 2.38 (s, 3H).
EXAMPLE 5
Title compound was isolated as a yellow solid (26 mg, 23%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.32 (d, J = 1.8 Hz, 1H), 8.34 (s, 1H), 8.16 (s, 1H), 8.05-8.01 (m, 3H), 7.93-
7.89 (m, 2H), 7.83 (m, 2H), 7.75 (ddd, J = 8.5, 7.0, 1.5 Hz, 1H), 7.59 (ddd, J = 8.3, 6.9, 1.4 Hz,
1H), 6.17 (d, J = 2.3 Hz, 1H), 2.45 (s, 3H).
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EXAMPLE 6
Title compound was isolated as an orange solid (19 mg, 18%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.19 (d, J = 1.8 Hz, 1H), 8.32 (d, J = 8.2 Hz, 1H), 8.17 (s, 1H), 8.10-8.07
(m, 2H), 7.98 (d, J = 7.3 Hz, 1H), 7.91-7.85 (m, 4H), 7.74 (ddd, J = 8.5, 7.0, 1.5 Hz, 1H), 7.58-
7.54 (m, 2H), 5.78 (d, J = 2.8 Hz, 1H), 2.38 (s, 3H).
EXAMPLE 7
Title compound was isolated as a yellow solid (24 mg, 26%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.03 (d, J = 1.8 Hz, 1H), 8.46 (m, 1H), 8.14 (s, 1H), 8.06-8.04 (m, 2H),
7.85-7.83 (m, 2H), 7.70-7.65 (m, 2H), 7.35 (d, J = 7.8 Hz, 1H), 7.19 (m, 1H), 5.56 (d, J = 3.2 Hz,
1H), 2.29 (s, 3H).
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EXAMPLE 8
Title compound was isolated as a white solid (40 mg, 43%). H NMR (400 MHz, DMSO-
d ): δ (ppm) 9.22 (d, J = 1.8 Hz, 1H), 8.59 (d, J = 2.3 Hz, 1H), 8.42 (dd, J = 4.6, 1.4 Hz, 1H),
8.22 (s, 1H), 8.09-8.07 (m, 2H), 7.90-7.85 (m, 3H), 7.72 (m, 1H), 7.34 (dd, J = 7.8, 4.6 Hz, 1H),
.67 (d, J = 3.2 Hz, 1H), 2.36 (s, 3H).
EXAMPLE 9
Title compound was isolated as a yellow solid (31 mg, 34%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.22 (d, J = 1.8 Hz, 1H), 8.49 (d, J = 5.5 Hz, 1H), 8.23 (s, 1H), 8.09-8.06
(m, 2H), 7.92-7.86 (m, 3H), 7.33 (dd, J = 4.6, 1.4 Hz, 2H), 5.64 (d, J = 3.7 Hz, 1H), 2.33 (s, 3H).
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EXAMPLE 10
Title compound was isolated as a brown solid (directly purified, % yield n.d.). H NMR
(400 MHz, DMSO-d ): δ (ppm) 10.78 (s, 1H), 9.16 (d, J = 1.8 Hz, 1H), 8.18 (s, 1H), 8.11-8.08
(m, 2H), 7.87-7.85 (m, 2H), 7.68 (m, 1H), 7.40 (d, J = 7.8 Hz, 1H), 7.33 (d, J = 7.8 Hz, 1H), 7.00
(ddd, J = 8.0, 7.0, 1.0 Hz, 1H), 6.90 (m, 1H), 6.23 (d, J = 2.3 Hz, 1H), 5.74 (d, J = 3.2 Hz, 1H),
2.39 (s, 3H).
EXAMPLE 11
Title compound was isolated as a yellow solid (31 mg, 30%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.21 (d, J = 1.4 Hz, 1H), 8.15 (s, 1H), 8.05-8.03 (m, 2H), 7.92 (m, 1H),
7.86-7.84 (m, 2H), 7.44 (d, J = 8.2 Hz, 1H), 7.40 (d, J = 7.8 Hz, 1H), 7.08 (ddd, J = 8.2, 7.1, 1.1
Hz, 1H), 6.94 (ddd, J = 7.8, 6.9, 0.9 Hz, 1H), 6.27 (s, 1H), 5.89 (d, J = 3.7 Hz, 1H), 3.91 (s, 3H),
2.39 (s, 3H).
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EXAMPLE 12
Title compound was isolated as a yellow solid (37 mg, 35%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.30 (d, J = 1.8 Hz, 1H), 8.27 (s, 1H), 8.17-8.15 (m, 2H), 8.04 (m, 1H),
7.91-7.89 (m, 2H), 7.81 (d, J = 7.8 Hz, 1H), 7.76 (d, J = 7.8 Hz, 1H), 7.31-7.23 (m, 3H), 6.00 (d,
J = 3.7 Hz, 1H), 2.31 (s, 3H).
EXAMPLE 13
Title compound was isolated as a yellow solid (39 mg, 35%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.26 (d, J = 1.4 Hz, 1H), 8.23 (s, 1H), 8.11-8.08 (m, 2H), 7.97 (m, 1H),
7.88-7.85 (m, 2H), 7.66 (d, J = 3.2 Hz, 1H), 7.54 (d, J = 3.2 Hz, 1H), 5.94 (d, J = 3.7 Hz, 1H),
2.26 (s, 3H).
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EXAMPLE 14
Title compound was isolated as an orange solid (18 mg, 19%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.31 (d, J = 1.8 Hz, 1H), 8.29 (s, 1H), 8.16-8.14 (m, 2H), 7.99 (m, 1H),
7.92-7.90 (m, 2H), 7.47 (d, J = 1.4 Hz, 1H), 6.94 (m, 1H), 6.52 (s, 1H), 5.91 (d, J = 3.7 Hz, 1H),
2.30 (s, 3H).
EXAMPLE 15
Title compound was isolated as a brown solid (38 mg, 37%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.29 (d, J = 1.4 Hz, 1H), 8.81 (d, J = 4.6 Hz, 1H), 8.59 (d, J = 7.8 Hz, 1H),
8.10 (s, 1H), 8.02 (dd, J = 8.2, 0.9 Hz, 1H), 7.95 (m, 1H), 7.81-7.69 (m, 6H), 7.44 (d, J = 4.6 Hz,
1H), 6.51 (d, J = 3.2 Hz, 1H), 2.44 (s, 3H).
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EXAMPLE 16
Title compound was isolated as a brown solid (directly purified, % yield n.d.). H NMR
(400 MHz, DMSO-d ): δ (ppm) 9.14 (s, 1H), 8.15 (s, 1H), 8.02 (d, J = 8.2 Hz, 2H), 7.57 (d, J =
8.2 Hz, 2H), 7.71 (s, 1H), 7.02 (s, 1H), 6.73 (s, 1H), 5.78 (s, 1H), 3.80 (s, 3H), 2.44 (s, 3H).
EXAMPLE 17
Title compound was isolated as a brown solid (directly purified, % yield n.d.). H NMR
(400 MHz, DMSO-d ): δ (ppm) 9.25 (s, 1H), 8.15 (s, 1H), 7.98-7.84 (m, 5H), 7.54 (m, 2H),
7.21-7.10 (m, 2H), 6.08 (s, 1H), 4.00 (s, 3H), 2.36 (s, 3H).
EXAMPLE 18
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Title compound was isolated as a yellow solid (directly purified, % yield n.d.). H NMR
(400 MHz, DMSO-d ): δ (ppm) 11.42 (s, 1H), 9.14 (s, 1H), 8.22 (s, 1H), 8.11 (d, J = 8.2 Hz,
2H), 7.88 (d, J = 8.2 Hz, 2H), 7.67 (s, 1H), 7.41 (dd, J = 9.6, 2.8 Hz, 1H), 7.22 (s, 1H), 6.31 (d, J
= 9.6 Hz, 1H), 5.33 (d, J = 2.8 Hz, 1H), 2.34 (s, 3H).
EXAMPLE 19
Title compound was isolated as a yellow solid (62 mg, 65%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.24 (d, J = 1.8 Hz, 1H), 8.22 (m, 2H), 8.09-8.06 (m, 2H), 7.93-7.85 (m,
4H), 7.13 (dd, J = 8.5, 2.5 Hz, 1H), 5.70 (d, J = 3.2 Hz, 1H), 2.34 (s, 3H).
EXAMPLE 20
Title compound was isolated as a yellow solid (51 mg, 53%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.27 (s, 1H), 8.46 (m, 2H), 8.24 (s, 1H), 8.08 (d, J = 8.2 Hz, 2H), 7.92 (s,
1H), 7.88 (d, J = 8.2 Hz, 2H), 7.60 (d, J = 9.6 Hz, 1H), 5.76 (d, J = 2.8 Hz, 1H), 2.36 (s, 3H
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EXAMPLE 21
Title compound was isolated as an orange solid (directly purified, % yield n.d.). H NMR
(400 MHz, DMSO-d ): δ (ppm) 9.30 (s, 1H), 9.07 (s, 1H), 8.20 (s, 1H), 8.08 (d, J = 8.2 Hz, 2H),
8.03 (d, J = 7.8 Hz, 2H), 7.88-7.80 (m, 5H), 6.02 (d, J = 2.3 Hz, 1H), 2.34 (s, 3H).
EXAMPLE 22
Title compound was isolated as a tan solid (directly purified, % yield n.d.). H NMR (400
MHz, DMSO-d ): δ (ppm) 11.02 (s, 1H), 8.66 (s, 1H), 8.22 (d, J = 8.7 Hz, 2H), 7.96 (d, J = 8.2
Hz, 2H), 7.57 (s, 1H), 7.30 (s, 1H), 5.78 (d, J = 1.4 Hz, 1H), 2.06 (s, 3H). Two N-H’s not
observed.
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EXAMPLE 23
Title compound was isolated as a tan solid (directly purified, % yield n.d.). H NMR (400
MHz, DMSO-d ): δ (ppm) 9.31 (s, 1H), 9.23 (s, 1H), 8.24 (s, 1H), 8.22 (d, J = 2.3 Hz, 1H), 8.07
(d, J = 8.7 Hz, 2H), 8.01 (s, 1H), 7.82 (d, J = 8.7 Hz, 2H), 7.43 (m, 1H), 7.38 (d, J = 7.8, 1H),
7.32 (m, 1H), 7.10 (dd, J = 7.3, 1.4, 1H), 5.83 (d, J = 2.3 Hz, 1H), 2.38 (s, 3H).
EXAMPLE 24
Title compound was isolated as a yellow solid (42 mg, 42%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.30 (d, J = 1.8 Hz, 1H), 8.35 (d, J = 5.0 Hz, 1H), 8.26 (s, 1H), 8.10-8.07
(m, 2H), 7.97 (m, 1H), 7.90-7.87 (m, 2H), 7.45 (d, J = 1.4 Hz, 1H), 7.36 (dd, J = 5.0, 1.4 Hz,
1H), 5.70 (d, J = 3.7 Hz, 1H), 2.34 (s, 3H).
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EXAMPLE 25
Title compound was isolated as a white solid (48 mg, 48%). H NMR (400 MHz, DMSO-
d ): δ (ppm) 9.17 (d, J = 1.8 Hz, 1H), 8.21 (s, 1H), 8.12 (d, J = 2.3 Hz, 1H), 8.11-8.08 (m, 2H),
7.90-7.87 (m, 2H), 7.77 (m, 1H), 7.64 (dd, J = 8.5, 2.5 Hz, 1H), 6.77 (d, J = 8.2 Hz, 1H), 5.58 (d,
J = 2.8 Hz, 1H), 3.77 (s, 3H), 2.36 (s, 3H).
EXAMPLE 26
Title compound was isolated as a yellow solid (47 mg, 47%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.21 (d, J = 1.8 Hz, 1H), 8.21 (s, 1H), 8.17 (s, 1H), 8.15 (d, J = 2.8 Hz, 1H),
8.11-8.08 (m, 2H), 7.89-7.85 (m, 3H), 7.28 (m, 1H), 5.67 (d, J = 3.2 Hz, 1H), 3.76 (s, 3H), 2.35
(s, 3H).
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EXAMPLE 27
Title compound was isolated as a yellow solid (24 mg, 24%). H NMR (400 MHz,
DMSO-d ): δ (ppm) 9.12 (d, J = 1.4 Hz, 1H), 8.15 (s, 1H), 8.05-8.02 (m, 3H), 7.88-7.86 (m, 2H),
7.55 (m, 1H), 7.51 (dd, J = 7.3, 1.8 Hz, 1H), 6.89 (dd, J = 7.3, 4.6 Hz, 1H), 5.79 (d, J = 3.2 Hz,
1H), 3.94 (s, 3H), 2.39 (s, 3H).
EXAMPLE 28
Title compound was isolated as a tan solid (37 mg, 37%). H NMR (400 MHz, DMSO-d ):
δ (ppm) 9.10 (d, J = 1.4 Hz, 1H), 8.19 (s, 1H), 8.12-8.10 (m, 2H), 7.89-7.87 (m, 2H), 7.64 (s,
1H), 7.60 (dd, J = 7.3, 7.3 Hz, 1H), 6.94 (d, J = 6.9 Hz, 1H), 6.63 (d, J = 7.8 Hz, 1H), 5.51 (d, J
= 3.2 Hz, 1H), 3.73 (s, 3H), 2.30 (s, 3H).
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EXAMPLE 29
Title compound was isolated as a brown solid (directly purified, % yield n.d.). H NMR
(400 MHz, DMSO-d ): δ (ppm) 9.26 (d, J = 1.4 Hz, 1H), 8.19 (s, 1H), 8.09 (s, 1H), 8.05 (d, J =
8.2 Hz, 2H), 7.90-7.85 (m, 4H), 7.29 (m, 1H), 5.85 (d, J = 3.2 Hz, 1H), 2.35 (s, 3H).
EXAMPLE 30
Title compound was isolated as a tan solid (directly purified, % yield n.d.). H NMR (400
MHz, DMSO-d ): δ (ppm) 9.31 (s, 1H), 8.53 (s, 1H), 8.35 (d, J = 5.0 Hz, 1H), 8.21 (s, 1H), 8.04
(d, J = 8.2 Hz, 2H), 7.89-7.87 (m, 3H), 7.40 (m, 1H), 5.94 (d, J = 2.8 Hz, 1H), 2.35 (s, 3H).
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EXAMPLE 31
Title compound was isolated as a yellow solid (directly purified, % yield n.d.). H NMR (400
MHz, DMSO-d ): δ (ppm) 9.26 (d, J = 1.4 Hz, 1H), 8.54 (s, 2H), 8.23 (s, 1H), 8.09-8.07 (m,
2H), 7.88-7.86 (m, 2H), 7.82 (m, 1H), 5.68 (d, J = 2.8 Hz, 1H), 3.83 (s, 3H), 2.34 (s, 3H).
EXAMPLE 32
Title compound was isolated as a yellow solid (directly purified, % yield n.d.). H NMR
(400 MHz, DMSO-d ): δ (ppm) 9.16 (s, 1H), 8.18 (s, 1H), 8.12 (s, 1H), 8.05 (d, J = 8.2 Hz, 2H),
7.88 (d, J = 8.7 Hz, 2H), 7.54 (m, 1H), 5.72 (d, J = 2.8 Hz, 1H), 3.96 (s, 3H), 3.81 (s, 3H), 2.34
(s, 3H).
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E) General experimental procedure for the continuous flow synthesis (Method B) of 5-
(thiazolyl)-3,4-dihydropyrimidin-2(1H)-ones
Scheme 6. Continuous flow synthesis of 5-(thiazolyl)-3,4-dihydropyrimidin-2(1H)-ones.
All reactions were conducted in DMF under a positive pressure of nitrogen. Streams of the
ketal-protected thioamide (32.5 μL/min, 0.75 M, DMF, 1 equiv) and a solution of α-
bromoketones (32.5 μL/min, 0.75 M, DMF, 1 equiv) were mixed in a 250 μL glass reactor
heated to 150 °C (3.75 min). After exiting the chip, the combined flow (65.0 μL/min) was
introduced to a single steam (32.5 μL/min, 0.9 M, DMF, 1.2 equiv) of aldehyde and urea in a
1000 μL glass reactor heated to 200 °C (10 min). The reaction flow was then collected (1250 μL)
after passing through the back pressure regulator. These reactions were carried out with a back
pressure of 6.0 bar.
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Scheme 7. Example of continuous flow synthesis.
F) Table of additional 5-(thiazolyl)-3,4-dihydropyrimidin-2(1H)-ones prepared.
Example 34 Example 36
Example 33 Example 35
Example 37 Example 38
Example 39 Example 40
Example 43
Example 42 Example 44
Example 41
Example 46
Example 48
Example 45 Example 47
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Example 49 Example 50 Example 51 Example 52
Example 55
Example 53
Example 54
Example 56
Example 57
Example 58 Example 59
Example 60
Example 64
Example 61 Example 62 Example 63
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Example 66 Example 67
Example 68
Example 65
Example 70 Example 71 Example 72
Example 69
Example 74
Example 75
Example 73 Example 76
Example 77 Example 78
Example 79
Example 80
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Example 81
Example 82 Example 84
Example 83
Example 85
Example 86 Example 87 Example 88
Example 89
Example 90 Example 91 Example 92
Example 95
Example 96
Example 93
Example 94
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G) Evaluation of Dihydropyrimidines in Anti-viral Assays
The anti-viral activity of dihydropyrimidines was shown by inhibition of virus replication in
MAGI-CCR5 cells. MAGI-CCR5 cells are derived from HeLa-CD4-LTR- -galactosidase cells.
The cells have been engineered to express high levels of CD4 and CCR5 and contain one copy of
the HIV-1 LTR promoter driving expression of the -galactosidase gene upon HIV-1 Tat
transactivation. On the day preceding the assay, the cells were plated at 1.0x10 cells per well
and maintained at 37 C and 5% CO in a humidified incubator. Total cell count and viability
was visually assessed using a hemacytometer and trypan blue exclusion.
Compounds were evaluated at six concentrations (triplicate wells/concentration). On the day
of assay setup, compound dilutions were prepared at two-times (2X) the final concentrations.
Media was decanted and wells were replenished with 50 l of 2X compounds, followed by the
addition of 50 l of diluted virus. Identical uninfected assays were prepared for parallel
cytotoxicity testing. The cultures were incubated for 48 hours after which efficacy was
measured by the inhibition of galactosidase reporter expression and cytotoxicity was
measured by MTS staining.
Evaluation of Dihydropyrimidines vs. HIV-1 in MAGI-CCR5 Cells
Ba-L
A = IC ≤ 1.0 M, B > 1.0 to 5.0 M, C > 5.0 M to 100 M and D > 100 M
A = TC ≥ 100.0 M, B < 100.0 to 50 M and C < 50 M
A = TI (TC /IC ) ≥ 100.0, B < 100.0 – 50.0, C < 50.0 – 10.0 and D < 10.0
50 50
Compound IC ( M) TC ( M) TI (TC /IC )
50 50
50 50
Example 3 B A A
Example 4 B A C
Example 5 C A D
Example 6 B A C
Example 7 B A C
Example 8 B A C
Example 9 B A C
Example 10 B C C
Example 11 A A A
Example 12 B A C
Example 13 C A D
Example 14 C A C
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Compound IC ( M) TC ( M) TI (TC /IC )
50 50 50 50
Example 15 B A B
Example 16 D A D
Example 18 D A D
Example 19 B A B
Example 20 A A A
Example 21 D A D
Example 22 D A D
Example 23 A B A
Example 24 C A C
Example 25 A A A
Example 26 C A D
Example 27 C A C
Example 28 B A B
Example 29 A A A
Example 30 D A D
Example 31 B A C
Example 32 C A D
Example 33 C A D
Example 34 A A A
Example 35 B B C
Example 36 C B D
Example 37 C A D
Example 38 C B D
Example 39 C A D
Example 40 D A D
Example 41 C B D
Example 42 D A D
Example 43 D A D
Example 44 B B C
Example 45 D A D
Example 46 C A D
Example 48 A A A
Example 49 B A C
Example 50 B A C
Example 51 C A C
Example 52 B A C
Example 53 B A C
Example 54 C B C
Example 55 C A C
Example 56 C A C
Example 57 C A C
Example 58 B A C
Example 59 A A A
Example 60 C A C
Example 61 C A D
Example 62 C A D
Example 63 C A D
5184N-NZ
Compound IC ( M) TC ( M) TI (TC /IC )
50 50 50 50
Example 64 A C B
Example 65 B A C
Example 66 C B D
Example 67 C B D
Example 68 C A D
Example 69 B A B
Example 71 B A B
Example 72 A A A
Example 73 C B D
Example 74 B B C
Example 75 C C D
Example 76 A A A
Example 77 D A D
Example 78 C A D
Example 79 A A A
Example 80 D A D
Example 81 B A B
Example 82 A B A
Example 83 A C B
Example 84 A C B
Example 85
A C B
Example 86
A A A
Example 87
A A A
Example 88 B A C
Example 89 D A D
Example 90 A A A
Example 91 A A A
Example 92
A A A
Example 93
A A A
Example 94
B B C
Example 95 D A D
Example 96 A A A
TAK 779 0.004 > 10.0 2902.7
AMD 3100 > 10.0 > 10.0 N/A
AZT 0.08 > 1.0 > 36.5
Raltegravir 0.026 > 100.0 > 3.85
Maraviroc 0.0006 > 1.0 > 2004.2
TMC-125 (Etravirine) 0.003 > 100.0 > 37,500.0
A = IC ≤ 1.0 M, B > 1.0 to 5.0 M, C > 5.0 M to 100 M and D > 100 M
A = TC ≥ 100.0 M, B < 100.0 to 50 M and C < 50 M
A = TI (TC /IC ) ≥ 100.0, B < 100.0 – 50.0, C < 50.0 to 10.0 and D < 10.0
50 50
The dihydropyrimidine analogs are shown to inhibit the activity of the HIV-1 RT enzyme as
shown in biochemical RT assay.
5184N-NZ
Evaluation of Dihydropyrimidines vs. HIV-1 in Peripheral Blood Mononuclear Cells
Ba-L
(PBMCs)
Cultures of pooled phytohemagglutinin stimulated peripheral blood mononuclear cells
(PBMC) were seeded into a 96-well plate at plating density of 5 x 10 cells/well. Compounds
were serially diluted into media in ½-log increments using a high test of 100 mM and 100 ml of
each concentration (nine total concentrations). Cells were infected with HIV strains HIV-1
Ba-L
and NL4-3 at an MOI = 0.1. The PBMCs were cultured for seven days in an humidified
incubator maintained at 37ºC, 5% CO atmosphere. At the assay end-point, the supernatant was
collected and analyzed for reverse transcriptase activity. For the RT assay, tritiated thymidine
triphosphate (3H-TTP, 80 Ci/mmol) was diluted 1:1 dH O:Ethanol at 1 mCi/ml. Poly rA:oligo
dT template:primer was prepared as a stock solution by combining 150 µl poly rA (20 mg/ml)
with 0.5 mL oligo dT (20 units/ml) and 5.35 ml sterile dH O followed by aliquoting (1.0 ml) and
storage at -20°C. The RT reaction buffer contained of 125 ml 1.0 M EGTA, 125 ml dH O, 125
ml 20% Triton X100, 50 ml 1.0 M Tris (pH 7.4), 50 ml 1.0 M DTT, and 40 ml 1.0 M MgCl .
The final reaction mixture was prepared by combining 1 part 3H-TTP, 4 parts dH O, 2.5 parts
poly rA:oligo dT stock and 2.5 parts reaction buffer. To each well, ten microliters of the reaction
mixture and 15 µl of virus containing supernatant were added. The plates were incubated at 37°C
for 60 minutes. Following incubation, the reaction volume was spotted onto DE81 filter-mats,
washed 5 times for 5 minutes each in a 5% sodium phosphate buffer or 2X SSC. PBMCs were
washed 2 times for 1 minute each in distilled water, 2 times for 1 minute each in 70% ethanol,
and then dried. Incorporated radioactivity (counts per minute, CPM) was quantified using
standard liquid scintillation techniques.
Cytotoxicity was assessed by MTS staining. At assay end-point, PBMC were stained with the
addition of 20 ml/well of the soluble tetrazolium-based dye MTS to determine cell viability and
quantify compound toxicity. The plates were incubated 4 to 6 hrs at 37 C. Following incubation,
the activity was assessed by reading absorbance values at 490/650 nm.
A = IC ≤ 1.0 M, B > 1.0 to 5.0 M, C > 5.0 M to 100 M and D > 100 M
A = TC ≥ 100.0 M, B < 100.0 to 50 M and C < 50 M
A = TI (TC /IC ) ≥ 100.0, B < 100.0 – 50.0, C < 50.0 – 10.0 and D < 10.0
50 50
5184N-NZ
Compound IC ( M) TC ( M) TI (TC /IC )
50 50 50 50
Example 3
A A A
Example 10
B B C
Example 11
A A A
Example 15 B A B
Example 18 D A D
Example 19 A A A
Example 21 D A D
Example 23
A A A
Example 25
A A A
Example 26
B A C
Example 28 B A B
Example 29 A A A
Example 30 D A D
Example 33
C B D
Example 34
A B A
Example 34 (enantiomer) C A D
Example 35 B B C
Example 36 C C D
Example 38 C B D
Example 40 C A D
Example 42 C A D
Example 43
C A D
Example 44
C B D
Example 48
A A A
Example 50 A A A
Example 59 A A A
Example 64 A A A
Example 68
C B D
Example 69
B A C
Example 71
C A C
Example 74 B B C
Example 80 B A B
Example 81 A A A
Example 86
A A A
Example 87
A A A
Example 89
C A D
Example 90
B B C
Example 91 B A B
Example 92 B B C
Example 93 A A A
Example 96
A A A
TAK 779
0.35 > 10.0 > 29.9
AMD 3100
> 10.0 > 10.0 N/A
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Compound IC ( M) TC ( M) TI (TC /IC )
50 50 50 50
0.02 > 1.0 > 54.9
Indinavir
0.048 > 1.0 > 21.0
Raltegravir
0.003 > 1.0 > 371.0
Maraviroc 0.009 > 1.0 > 231.2
TMC-125 (Etravirine) 0.003 > 1.0 > 325.0
A = IC ≤ 1.0 M, B > 1.0 to 5.0 M, C > 5.0 M to 100 M and D > 100 M
A = TC ≥ 100.0 M, B < 100.0 to 50 M and C < 50 M
A = TI (TC /IC ) ≥ 100.0, B < 100.0 – 50.0, C < 50.0 – 10.0 and D < 10.0
50 50
The dihydropyrimidine analogs are shown to inhibit the activity of the HIV-1 RT enzyme as
shown in biochemical RT assay.
Enantiomers of Example 34 were created and utilized to assess the activity of the compounds
in a biochemical reverse transcriptase assay. Purified recombinant HIV heterodimeric
NL4-3
(p66/p51) Reverse Transcriptase (RT) was used in experiments. RT activity was determined by
the incorporation of radiolabeled deoxyribonucleotides into the newly synthesized DNA strand.
The standard RT reaction mixture contained a synthetic homopolymeric template/primer
[poly(rA)/oligo(dT)] or in vitro transcribed viral RNA derived from the HIV-1 5’-LTR
NL4-3
region (nucleotide residues 454 to 652) and a primer complementary to the primer binding site
(PBS, nucleotide residues 636 to 652), radiolabeled deoxyribonucleotide, dNTPs and RT. The
reaction was carried out in a volume of 40 l containing 50 mM Tris HCl, pH 7.8, 50 mM KCl,
5mM MgCl , 1mM DTT, 50 M each of dATP, dCTP, dGTP, 50 nM dTTP, 1µCi of [ H] dTTP
(70-90Ci/mM) and 5 nM template/primer. The reaction was initiated by the addition of 10 nM
RT. For compound screening, serially diluted test articles were added to the reaction followed by
the addition of RT. The reaction mixture was incubated at 37 C for 1h, then quenched by the
addition of ice-cold trichloroacetic acid (TCA) to the final concentration of 10%. The plate was
incubated at 4 C for 1h to precipitate the synthesized DNA, then rinsed 3-times with 10% TCA
and 1 time with 70% ethanol. After addition of 25 l scintillation fluid to completely dried wells,
radioactivity is counted by MicroBeta scintillation counter. The reduction of radioactivity
represents the potency of compound inhibition.
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Activity of Example 34 Enantiomers Against HIV RT In A Biochemical Assay
A = IC ≤ 1.0 M, B > 1.0 to 5.0 M, C > 5.0 M to 100 M and D > 100 M
’LT R/d PR
Compound Name
High-Test ( M) IC ( M)
0.29
Nevirapine 10.0
0.19
0.01
Efavirenz 10.0
0.01
0.009
AZT-TP 1.0
0.01
TMC – 125 (Etravirine) 250 0.19
Example 34 250 A
Example 34 (enantiomer) 250 D
In addition, viral resistance to DHPMs is demonstrated by the abolishment of antiviral
activity against viruses where amino acids in the NNRTI binding pocket are changed relative to
wild type. Changes in the binding site amino acids K103 to an Asparagine and Y181 to cysteine
were shown to inhibit the anti-viral activity of Example 11 and Example 19. The asparagine
variation at residue 103 and the cysteine variation at residue 181 are known to inhibit the activity
of the NNRTI’s.
Evaluation Dihydropyrimidines vs. HIV-1 and HIV-1 K103N, Y181C in PBMCs
Ba-L
Compound Virus TI (TC /IC )
IC ( M) TC ( M)
50 50 50 50
Ba-L B B
Example 10
A17 C D
Ba-L A A
Example 11
A17 D A D
Ba-L A A A
Example 19
A17 D A D
Ba-L D A D
Example 21
A17 D D
Ba-L C D
Example 42
A17 C D
Ba-L A A A
Example 86
A17 C A D
Ba-L A A A
Example 87
A17 C A C
Ba-L D D
Example 89
A17 D D
Ba-L
Example 93 A A A
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Compound Virus IC ( M) TC ( M) TI (TC /IC )
50 50 50 50
D A D
Ba-L
A A A
Example 96
C A D
Ba-L 0.003 > 1.0 > 402.0
Etravirine (TMC-125)
A17 0.010 > 1.0 > 101.0
Ba-L 0.011 > 1.0 > 88.6
A17 0.0016 > 1.0 > 629.0
A = IC ≤ 1.0 M, B > 1.0 to 5.0 M, C > 5.0 M to 100 M and D > 100 M
A = TC ≥ 100.0 M, B < 100.0 to 50 M and C < 50 M
A = TI (TC /IC ) ≥ 100.0, B < 100.0 – 50.0, C < 50.0 – 10.0 and D < 10.0
50 50
Compatibility of Dihydropyrimidines in combination with the current standard of care
The dihydropyrimidines were tested in combination with two FDA-approved drugs that are
used in the first line regimen. Three dihydropyrimidines were each tested in combination with
tenofovir to assess the impact to cytotoxicity in CEM-SS and antiviral activity against HIV .
IIIB
Tenofovir (a nucleoside reverse transcriptase inhibitor; NRTI) in combination with Emtricitabine
(NRTI) and Tenofovir in combination with Efavirenz (a non-nucleoside reverse transcriptase
inhibitor;NNRTI) were the standard of care references.
The compounds were diluted in ½-log increments. The high test concentrations for the
drugs were 100 M for the DHPM, 50 M for Tenofovir (TFV), 500 nM for Emtricitabine
(FTC), 100 nM for Efavirenz (EFV), 20 M for Stavudine, and 10 M for Ribavirin (Rib).
There were 6-dilutions of Drug A and 9-dilutions of Drug B, and there were three efficacy plates
set up and 2 cytotoxicity plates set up. The plates were set up as shown below
Plate Map for Drug Testing with Two Drugs in Combination
A 1 2 3 4 5 6 7 8 9 10 11 12
B Cell Control
50 C Cell Control
16 D Cell Control
E Virus Control
1.6 F Virus Control
0.5 G Virus Control
0 0.032 0.1 0.32 1 3.2 10 32 100
Drug B ( M)
Figure 1: Plate Map for Drug Testing with Two Drug Combinations: Areas shaded gray contain media only. Areas shaded
orange contain CEM-SS cells only. Areas shaded blue contain CEM-SS cells infected with HIVIIIB. Areas colored white contain
cells infected with virus and different concentrations of the two drugs. For example, well C2 would contain 50nM Drug A and
0.032mM Drug B.
Drug A (nM)
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MacSynergy was used to assess the effect on potency and cytotoxicity when combining
two drugs in an experiment. MacSynergy calculates an expected effect for each well using the
Bliss Independence model. This model assumes the two drugs are acting independently to affect
virus replication. Bliss independence can be expressed as Z = X + Y(1-X). For example, if drug
A inhibits virus replication by 60% and drug B by 25% then using the model would predict the
combination to inhibit virus replication by 70% in an experimental system [0.6 + 0.25(1.0-0.6) =
0.7]. Data are graphed using the surface function in excel. The independent data are plotted on
the X and Y axis (the concentrations of the two drugs); the x-axis contains the concentration of
drug A the y-axis the concentration of drug B. The dependent variable (the biological effect) is
plotted on the z-axis; the percent inhibition observed relative to the expected value. The volume
of the 3D dose surface is calculated. Synergy is defined as greater than the expected effect, and
antagonism is defined as less than the expected effect. The extent to which a combination is
synergistic or antagonistic is defined in Table 2.
Table 1: Synergy and Antagonism Legend
Volume Interpretation
A Compound interactions highly synergize efficacy or cytotoxicity
B Compound interactions slightly synergize efficacy or cytotoxicity
C Additive
D Compound interaction slightly antagonize efficacy of cytotoxicity
E Compound interaction highly antagonize efficacy of cytotoxicity
The dihydropyrimidines were tested in combination with Tenofovir in uninfected CEM-
SS cells to assess the impact of combining these compounds on cytotoxicity. The results are
shown in Table 4.
Table 2: Experimental Synergy and Antagonism Volumes Observed
CID Antiviral Cytotoxicity
Synergy Antagonism Synergy Antagonism
Drug A Drug B
d4T Ribavirin C E C C
Tenofovir FTC C C C C
Tenofovir Efavirenz C C C C
Tenofovir Example 48 B C C C
Tenofovir Example 25 C C C D
Tenofovir Example 64 C C B C
1 = Maximum percent inhibition above expected effect for synergy. (See Table 1 for explanation of values).
2 = Maximum percent inhibition below expected effect for antagonism. (See Table 1 for explanation of values).
* Cytotoxicity adjusted values
These studies show that the dihydropyrimidines do not adversely affect Tenofovir in
combination.
5184N-NZ
Exemplary embodiments of the present disclosure include:
Embodiment 1: A compound represented by the following Formula I:
wherein B is selected from the group consisting of substituted or unsubstituted aryl, substituted
or unsubstituted heteroaryl;
W is O, S, or NR;
Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl,
C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR;
2 8 2 8 1 8 1 8 1 8
1 2 3
R, R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C -
1 8 1
C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, substituted or unsubstituted
8 1 8 2-8 2-8
aryl, substituted or unsubstituted heteroaryl, or heterocycle;
X is or ;
9 1 2
D and E are each individually selected from the group consisting of O, S, NR , CR or CR R ;
R is selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C cycloalkyl,
1 8 1 8 3 8
C -C alkenyl, C -C alkynyl, C -C aryl, C -C heterocycle each of which is optionally
2 8 2 8 5 10 5 10
11 12 11 11 12 11 12
substituted with halogen, -OR , -NR R , -SR , -S(O)R , -S(O) R , or -S(O) NR R
2 2 ;
4 5 6 7 8
R , R , R , R , and R are each are independently selected from H, hydroxyl, halogen, cyano,
11 11 12 11 12 13 12
NO , -OR , -SR , -S(O)R , -S(O) R , -S(O) NR R , C -C haloalkyl, COR , -C(O)OR , -
2 2 2 1 8
11 12 12 11 12 11 12 11 12 11 12
C(O)NR R , -C(O)R , -NR R , -NR C(O)R , -NR S(O) R , -NR C(O)OR , -B(OH) ,
C -C alkyl, C -C cycloalkyl, C -C alkenyl, C -C alkynyl, substituted or unsubstituted aryl,
1 8 3 8 2 8 2 8
12 11 12
substituted or unsubstituted heteroaryl, -alkylC(O)-OR , -alkylC(O)NR R , -
12 11 12 12
alkenylC(O)OR , -alkenylC(O)NR R , -aryl(CH ) C(O)OR , -
11 12 11 12 11 12
aryl(CH ) C(O)NR R , -(CH ) C(O)NR S(O) R , -aryl(CH ) -C(O)NR S(O) R , -
2 m 2 m 2 2 m 2
11 12 11 12
(CH ) S(O) NR C(O)R , -aryl(CH ) S(O) NR C(O)R , or substituted or unsubstituted
2 m 2 2 m 2
5184N-NZ
heterocycle or substituted or unsubstituted heteroaryl containing 1 to 4 heteroatoms, optionally
substituted with 1 to 2 substituents selected from the group consisting of H, hydroxyl, halogen,
CF , C -C alkyl, C -C alkoxy, cyano, amino, C -C alkylamino, and C -C alkoxyC -C
3 1 8 1 8 1 8 1 8 1 8
4 5 6 7 8
alkylamino provided at least one of R , R , R , R , or R is other than hydrogen;
11 12 13
R , R , R , and R are each individually selected from the group consisting of H, C -C alkyl,
C -C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, substituted or
1 8 1 8 2-8 2-8
unsubstituted aryl, substituted or unsubstituted heteroaryl, or heterocycle;
m = 0 to 6;
wherein alkyl, alkenyl, alkynyl, cycloalkyl, aryl, heteroaryl or heterocycle may be substituted or
unsubstituted;
pharmaceutically acceptable salt thereof; solvate thereof and deuterated form thereof
Embodiment 2. A compound according to Embodiment 1, wherein B is selected from the group
consisting of aryl or substituted aryl.
Embodiment 3. A compound according to Embodiment 1, wherein B is selected from the group
consisting of heteroaryl and substituted heteroaryl.
Embodiment 4. A compound according to any one of Embodiments 1-3, wherein Y is a direct
bond.
Embodiment 5. A compound according to any one of Embodiments 1-4, wherein W is O.
Embodiment 6. A compound according to any one of Embodiments 1-5, wherein X is ;
D is CH and E is S.
Embodiment 7. A compound according to any one of Embodiments 1-6, wherein R is selected
from the group consisting of CN, NO , C -C alkyl, aryloxy and halo; each of R and R is
2 1 6
independently H or a C -C alkyl; and each of R and R is H .
Embodiment 8. A compound according to Embodiment 1 being represented by the formula II
5184N-NZ
wherein B is selected from the group consisting of substituted or unsubstituted pyridinyl and
when substituted the substitution is halo or C -C alkoxy in the ortho position to the nitrogen in
the pyridinyl ring or can be halo in the meta position when the nitrogen is in the 2-position;
mono- substituted or unsubstituted quinolinyl and when substituted the substitution is hydroxyl;
mono-substituted or unsubstituted indolyl and when substituted the substitution is C -C alkyl;
unsubstituted benzothiopheneyl; unsubstituted thiopheneyl; mono-substituted, or di- substituted
or unsubstituted phenyl and when substituted the substitution is selected from the group
consisting of hydroxyl, halo, CN, CF , C -C alkoxy, and aryloxy; provided that when the phenyl
3 1 4
is di- substituted the substitutions are located ortho to each other; and unsubstituted biphenyl;
Y is a direct bond or Y can be a C -C alkyl when R is CN;
R is H, C -C alkyl or C cycloalkyl;
1 6 3-8
R is H, C -C alkyl or C cycloalkyl;
1 6 3-8
R is H;
each of R and R is independently H, C -C alkyl or C cycloalkyl;
1 6 3-8
R is selected from the group consisting of CN, NO , aryloxy, and halo;
pharmaceutically acceptable salts thereof; solvates thereof and deuterated form thereof.
Embodiment 9. A compound according to Embodiment 1 represented by the formula III
5184N-NZ
1 4 8
Wherein R is H, C -C alkyl or C cycloalkyl; R and R are each independently H, C -C alkyl
1 6 3-8 1 6
or C cycloalkyl;
and B is selected from the group consisting of phenyl substituted with at least one member
selected from the group consisting hydroxyl, halo, C -C alkoxy, aryloxy; pyridyl substituted
with at least one member selected from the group consisting halo and C -C alkoxy and indolyl
substituted with a C -C alkyl group; pharmaceutically acceptable salts thereof; solvates thereof
and deuterated form thereof.
Embodiment 10. A compound according to Embodiment 1 being selected from the group
consisting of
5184N-NZ
5184N-NZ
5184N-NZ
5184N-NZ
5184N-NZ
5184N-NZ
and ;
pharmaceutically acceptable salts thereof; solvates thereof and deuterated form thereof.
Embodiment 12. A compound according to Embodiment 1 being selected from the group
consisting of
5184N-NZ
and ;
pharmaceutically acceptable salts thereof; solvates thereof and deuterated form thereof.
Embodiment 13. A composition comprising a compound according to any one of Embodiment 1-
12, pharmaceutically acceptable salt thereof or solvate thereof and pharmaceutically acceptable
carrier.
Embodiment 14. A composition comprising a compound according to any one of Embodiments
1-12, pharmaceutically acceptable salt thereof or solvate thereof and another therapeutic agent.
Embodiment 15. A composition according to Embodiment 14, wherein said therapeutic agent is
selected from the group consisting of NRTIs, NNRTIs, protease inhibitors, integrase inhibitors,
and CCR5 antagonists.
Embodiment 16. A composition according to Embodiment 14, wherein said therapeutic agent is
tenofovir.
Embodiment 17. A method for inhibiting HIV-1 replication in patients by administering an
effective HIV-1 replication inhibiting amount of a compound according to any one of
Embodiments 1-12, pharmaceutically acceptable salt thereof or solvate thereof to a subject in
need thereof or a composition according to any one of Embodiments 13-16.
Embodiment 18. The method according to Embodiment 17, which comprises inhibiting the viral
RT enzyme.
Embodiment 19. The method according to Embodiment 17, which comprises inhibiting HIV
strains resistant to NNRTIs.
5184N-NZ
Embodiment 20. A method for treating patients infected with HIV/AIDS, by administering a
compound according to any one of Embodiments 1-12, pharmaceutically acceptable salt thereof
or solvate thereof to a subject in need thereof or a composition according to any one of
Embodiments 13-16.
Embodiment 21. A pre-exposure prophylaxis method for treating a patient and for the prevention
of transmission from an infected person to an uninfected person by administering to a patient in
need thereof a therapeutically effective amount of a compound of according to any one of
Embodiments 1-12, pharmaceutically acceptable salt thereof or solvate thereof to a subject in
need thereof or a composition according to any one of Embodiments 13-16.
The compounds of the present disclosure can be administered by any conventional means
available for use in conjunction with pharmaceuticals, either as individual therapeutic agents or
in a combination of therapeutic agents. They can be administered alone, but generally
administered with a pharmaceutical carrier selected on the basis of the chosen route of
administration and standard pharmaceutical practice. The compounds can also be administered
in conjunction with other therapeutic agents, such as with existing standard of care treatments
(NRTIs, NNRTIs, protease inhibitors, integrase inhibitors, CCR5 antagonists and the like), with
one particular example being Tenofovir.
The pharmaceutically acceptable carriers described herein, for example, vehicles,
adjuvants, excipients, or diluents, are well-known to those who are skilled in the art. Typically,
the pharmaceutically acceptable carrier is chemically inert to the active compounds and has no
detrimental side effects or toxicity under the conditions of use. The pharmaceutically acceptable
carriers can include polymers and polymer matrices.
The dosage administered will, of course, vary depending upon known factors, such as the
pharmacodynamics characteristics of the particular agent and its mode and route of
administration; the age, health and weight of the recipient; the nature and extent of the
symptoms; the kind of concurrent treatment; the frequency of treatment; and the effect desired.
A daily dosage of active ingredient can be expected to be about 0.001 to 1000 milligrams (mg)
per kilogram (kg) of body weight, with the preferred dose being 0.1 to about 30 mg/kg.
5184N-NZ
Dosage forms (compositions suitable for administration) typically contain from about 1
mg to about 500 mg of active ingredient per unit. In these pharmaceutical compositions, the
active ingredient will ordinarily be present in an amount of about 0.5-95% weight based on the
total weight of the composition.
The active ingredient can be administered orally in solid dosage forms, such as capsules,
tablets, and powders, or in liquid dosage forms, such as elixirs, syrups and suspensions. It can
also be administered parenterally, in sterile liquid dosage forms. Other dosage forms are
potentially possible such as administration transdermally, via patch mechanism or ointment.
Formulations suitable for oral administration can comprise (a) liquid solutions, such as an
effective amount of the compound dissolved in diluents, such as water, saline, or orange juice;
(b) capsules, sachets, tablets, lozenges, and troches, each containing a predetermined amount of
the active ingredient, as solids or granules; (c) powders; (d) suspensions in an appropriate liquid;
and (e) suitable emulsions. Liquid formulations may include diluents, such as water and alcohols,
for example, ethanol, benzyl alcohol, propylene glycol, glycerin, and the polyethylene alcohols,
either with or without the addition of a pharmaceutically acceptable surfactant, suspending agent,
or emulsifying agent. Capsule forms can be of the ordinary hard- or soft-shelled gelatin type
containing, for example, surfactants, lubricants, and inert fillers, such as lactose, sucrose,
calcium phosphate, and corn starch. Tablet forms can include one or more of the following:
lactose, sucrose, mannitol, corn starch, potato starch, alginic acid, microcrystalline cellulose,
acacia, gelatin, guar gum, colloidal silicon dioxide, croscarmellose sodium, talc, magnesium
stearate, calcium stearate, zinc stearate, stearic acid, and other excipients, colorants, diluents,
buffering agents, disintegrating agents, moistening agents, preservatives, flavoring agents, and
pharmacologically compatible carriers. Lozenge forms can comprise the active ingredient in a
flavor, usually sucrose and acacia or tragacanth, as well as pastilles comprising the active
ingredient in an inert base, such as gelatin and glycerin, or sucrose and acadia, emulsions, and
gels containing, in addition to the active ingredient, such carriers as are known in the art; and
mouthwashes.
Formulations suitable for parenteral administration include aqueous and non-aqueous,
isotonic sterile injection solutions, which can contain anti-oxidants, buffers, bacteriostats, and
solutes that render the formulation isotonic with the blood of the intended recipient, and aqueous
and non-aqueous sterile suspensions that can include suspending agents, solubilizers, thickening
agents, stabilizers, and preservatives. The compound can be administered in a physiologically
5184N-NZ
acceptable diluent in a pharmaceutical carrier, such as a sterile liquid or mixture of liquids,
including water, saline, aqueous dextrose and related sugar solutions, an alcohol, such as ethanol,
isopropanol, or hexadecyl alcohol, glycols, such as propylene glycol or polyethylene glycol such
as poly(ethyleneglycol) 400, glycerol ketals, such as 2,2-dimethyl-1,3-dioxolanemethanol,
ethers, an oil, a fatty acid, a fatty acid ester or glyceride, or an acetylated fatty acid glyceride
with or without the addition of a pharmaceutically acceptable surfactant, such as a soap or a
detergent, suspending agent, such as pectin, carbomers, methylcellulose,
hydroxypropylmethylcellulose, or carboxymethylcellulose, or emulsifying agents and other
pharmaceutical adjuvants.
Oils, which can be used in parenteral formulations include petroleum, animal, vegetable, or
synthetic oils. Specific examples of oils include peanut, soybean, sesame, cottonseed, corn, olive,
petrolatum, and mineral. Suitable fatty acids for use in parenteral formulations include oleic acid,
stearic acid, and isostearic acid. Ethyl oleate and isopropyl myristate are examples of suitable fatty
acid esters. Suitable soaps for use in parenteral formulations include fatty alkali metal, ammonium,
and triethanolamine salts, and suitable detergents include (a) cationic detergents such as, for
example, dimethyldialkylammonium halides, and alkylpyridinium halides, (b) anionic detergents
such as, for example, alkyl, aryl, and olefin sulfonates, alkyl, olefin, ether, and monoglyceride
sulfates, and sulfosuccinates, (c) nonionic detergents such as, for example, fatty amine oxides, fatty
acid alkanolamides, and polyoxyethylene polypropylene copolymers, (d) amphoteric detergents
such as, for example, alkyl ß-aminopropionates, and 2-alkylimidazoline quaternary ammonium
salts, and (e) mixtures thereof.
The parenteral formulations typically contain from about 0.5% to about 25% by weight of
the active ingredient in solution. Suitable preservatives and buffers can be used in such
formulations. In order to minimize or eliminate irritation at the site of injection, such
compositions may contain one or more nonionic surfactants having a hydrophile-lipophile
balance (HLB) of from about 12 to about 17. The quantity of surfactant in such formulations
ranges from about 5% to about 15% by weight. Suitable surfactants include polyethylene
sorbitan fatty acid esters, such as sorbitan monooleate and the high molecular weight adducts of
ethylene oxide with a hydrophobic base, formed by the condensation of propylene oxide with
propylene glycol.
Formulations for topical administration include those pharmaceutical forms in which the
compound is applied externally by direct contact with the skin surface to be treated.
5184N-NZ
Conventional pharmaceutical forms for this purpose include ointments, lotions, pastes, jellies,
sprays, aerosols, and the like. The term "ointment" embraces formulations (including creams)
having oleaginous, absorption, water-soluble and emulsion-type bases, e.g., petrolatum, lanolin,
polyethylene glycols, as well as mixtures of these. These compositions may also be dissolved in
conventional solvents such as dimethylsulfoxide (DMSO), acetonitrile, dimethy1formamide
(DMF), dimethylacetamide (DMA), and propylene glycol/ ethanol/water.
Pharmaceutically acceptable excipients are also well-known to those who are skilled in
the art. The choice of excipient will be determined in part by the particular compound, as well as
by the particular method used to administer the composition. Accordingly, there is a wide
variety of suitable formulations of the pharmaceutical composition of the present disclosure. The
following methods and excipients are merely exemplary and are in no way limiting. The
pharmaceutically acceptable excipients preferably do not interfere with the action of the active
ingredients and do not cause adverse side-effects. Suitable carriers and excipients include
solvents such as water, alcohol, and propylene glycol, solid absorbants and diluents, surface
active agents, suspending agent, tableting binders, lubricants, flavors, and coloring agents.
The formulations can be presented in unit-dose or multi-dose sealed containers, such as
ampules and vials, and can be stored in a freeze-dried (lyophilized) condition requiring only the
addition of the sterile liquid excipient, for example, water, for injections, immediately prior to
use. Extemporaneous injection solutions and suspensions can be prepared from sterile powders,
granules, and tablets. The requirements for effective pharmaceutical carriers for injectable
compositions are well known to those of ordinary skill in the art. See Pharmaceutics and
Pharmacy Practice, J.B. Lippincott Co., Philadelphia, PA, Banker and Chalmers, Eds., 238-250
(1982) and ASHP Handbook on Injectable Drugs, Toissel, 4th ed., 622-630 (1986).
Additionally, formulations suitable for rectal administration may be presented as
suppositories by mixing with a variety of bases such as emulsifying bases or water-soluble bases.
Formulations suitable for vaginal administration may be presented as pessaries, tampons, creams,
gels, pastes, foams such as spermicidal foams, or spray formulas containing, in addition to the
active ingredient, such carriers as are known in the art to be appropriate.
Suitable pharmaceutical carriers are described in Remington’s Pharmaceutical Sciences,
Mack Publishing Company, a standard reference text in this field.
5184N-NZ
The dose administered to an animal, particularly a human, in the context of the present
disclosure should be sufficient to affect a therapeutic response in the animal over a reasonable
time frame. One skilled in the art will recognize that dosage will depend upon a variety of
factors including a condition of the animal, the body weight of the animal, as well as the severity
and stage of the condition being treated.
A suitable dose is that which will result in a concentration of the active agent in a patient
which is known to affect the desired response. The preferred dosage is the amount which results
in maximum inhibition of the condition being treated, without unmanageable side effects.
The size of the dose also will be determined by the route, timing and frequency of
administration as well as the existence, nature, and extend of any adverse side effects that might
accompany the administration of the compound and the desired physiological effect.
Useful pharmaceutical dosage forms for administration of the compounds according to the
present disclosure can be illustrated as follows:
Hard Shell Capsules
A large number of unit capsules are prepared by filling standard two-piece hard gelatine
capsules each with 100 mg of powdered active ingredient, 150 mg of lactose, 50 mg of cellulose
and 6 mg of magnesium stearate.
Soft Gelatin Capsules
A mixture of active ingredient in a digestible oil such as soybean oil, cottonseed oil or olive
oil is prepared and injected by means of a positive displacement pump into molten gelatin to form
soft gelatin capsules containing 100 mg of the active ingredient. The capsules are washed and
dried. The active ingredient can be dissolved in a mixture of polyethylene glycol, glycerin and
sorbitol to prepare a water miscible medicine mix.
Tablets
A large number of tablets are prepared by conventional procedures so that the dosage unit
was 100 mg of active ingredient, 0.2 mg. of colloidal silicon dioxide, 5 mg of magnesium stearate,
275 mg of microcrystalline cellulose, 11 mg. of starch, and 98.8 mg of lactose. Appropriate
aqueous and non-aqueous coatings may be applied to increase palatability, improve elegance and
stability or delay absorption.
5184N-NZ
Immediate Release Tablets/Capsules
These are solid oral dosage forms made by conventional and novel processes. These
units are taken orally without water for immediate dissolution and delivery of the medication.
The active ingredient is mixed in a liquid containing ingredient such as sugar, gelatin, pectin and
sweeteners. These liquids are solidified into solid tablets or caplets by freeze drying and solid
state extraction techniques. The drug compounds may be compressed with viscoelastic and
thermoelastic sugars and polymers or effervescent components to produce porous matrices
intended for immediate release, without the need of water.
Moreover, the compounds of the present disclosure can be administered in the form of
nose drops, or metered dose and a nasal or buccal inhaler. The drug is delivered from a nasal
solution as a fine mist or from a powder as an aerosol.
The term “comprising” (and its grammatical variations) as used herein is used in the
inclusive sense of “having” or “including” and not in the exclusive sense of “consisting only of.”
The terms “a” and “the” as used herein are understood to encompass the plural as well as the
singular.
All publications, patents and patent applications cited in this specification are herein
incorporated by reference, and for any and all purpose, as if each individual publication, patent
or patent application were specifically and individually indicated to be incorporated by reference.
In the case of inconsistencies, the present disclosure will prevail.
The foregoing description of the disclosure illustrates and describes the present
disclosure. Additionally, the disclosure shows and describes only the preferred embodiments
but, as mentioned above, it is to be understood that the disclosure is capable of use in various
other combinations, modifications, and environments and is capable of changes or modifications
within the scope of the concept as expressed herein, commensurate with the above teachings
and/or the skill or knowledge of the relevant art.
The embodiments described herein above are further intended to explain best modes
known of practicing it and to enable others skilled in the art to utilize the disclosure in such, or
other, embodiments and with the various modifications required by the particular applications or
uses. Accordingly, the description is not intended to limit it to the form disclosed herein. Also,
it is intended that the appended claims be construed to include alternative embodiments.
5184N-NZ
References
1. Global report: UNAIDS report on the global AIDS epidemic 2010.: Joint United Nations
Programme on HIV/AIDS (UNAIDS); 2010 2010.
2. Interim guidance: preexposure prophylaxis for the prevention of HIV infection in men
who have sex with men. MMWR Morb Mortal Wkly Rep 2011;60:65-8.
3. Grosskurth H, Mosha F, Todd J, et al. Impact of improved treatment of sexually
transmitted diseases on HIV infection in rural Tanzania: randomised controlled trial. Lancet
1995;346:530-6.
4. Grant RM, Lama JR, Anderson PL, et al. Preexposure chemoprophylaxis for HIV
prevention in men who have sex with men. N Engl J Med 2010;363:2587-99.
. Chasela CS, Hudgens MG, Jamieson DJ, et al. Maternal or infant antiretroviral drugs to
reduce HIV-1 transmission. N Engl J Med 2010;362:2271-81.
6. Achievements in public health. Reduction in perinatal transmission of HIV infection--
United States, 1985-2005. MMWR Morb Mortal Wkly Rep 2006;55:592-7.
7. MacArthur RD, Novak RM, Peng G, et al. A comparison of three highly active
antiretroviral treatment strategies consisting of non-nucleoside reverse transcriptase inhibitors,
protease inhibitors, or both in the presence of nucleoside reverse transcriptase inhibitors as initial
therapy (CPCRA 058 FIRST Study): a long-term randomised trial. Lancet 2006;368:2125-35.
8. Oversteegen L, Shah M, Rovini H. HIV combination products. Nat Rev Drug Discov
2007;6:951-2.
9. Hammer SM, Eron JJ, Jr., Reiss P, et al. Antiretroviral treatment of adult HIV infection:
2008 recommendations of the International AIDS Society-USA panel. JAMA 2008;300:555-70.
. Thompson MA, Aberg JA, Cahn P, et al. Antiretroviral treatment of adult HIV infection:
2010 recommendations of the International AIDS Society-USA panel. JAMA 2010;304:321-33.
11. Johnson VA, Brun-Vezinet F, Clotet B, et al. Update of the drug resistance mutations in
HIV-1: December 2010. Top HIV Med 2010;18:156-63.
12. Kim, J.; Cechetto, J.; No, Z.; Christophe, T.; Kim, T.; Taehee, N.; Nam, J. Y.; So, W.; Jo,
M.; Ok, T.; Park, C.; Seo, M. J.; Sohn, J.-H.; Sommer, P.; Boese, A. S.; Han, S.-J.; Park, Y. S.;
Kim, H. P. WO 2010046780, 2010.
13. Kharchenko, J. V.; Detistov, O. S.; Orlov, V. D. J. Comb. Chem. 2009, 11, 216-219.
14. Pagano, N. Herath, A., Cosford, N. D. P. J. Flow Chem. 2011, 1, 1-4.
5184N-NZ
. For similar reaction conditions, see: Zamir, L. O.; Nguyen, C. J. Labelled Compd.
Radiopharm. 1988, 25, 1189-1196. For characterization data, see: Paquette, L. A.;
Efremov, I. J. Am. Chem. Soc. 2001, 123, 4492-4501.
5184N-NZ
Claims (28)
1. A compound represented by the following Formula I: wherein B is a heteroaryl group having heteroatoms selected from the group consisting of nitrogen and sulphur atoms and wherein the heteroaryl is selected from the group consisting of a 4 to 7 membered monocyclic, a 7 to 11 membered bicyclic, and a 10 to 15 membered tricyclic ring system, which has at least one heteroatom and at least one carbon atom in the ring; wherein each ring of the heteroaryl group contains 1, 2 or 3 heteroatoms selected from nitrogen atoms and sulfur atoms, where the nitrogen and sulfur heteroatoms may also optionally be oxidized and the nitrogen heteroatoms may also optionally be quaternized; W is O, S, or NR; Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl, C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR; 2 8 2 8 1 8 1 8 1 8 1 2 3 R, R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C - 1 8 1 C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, an aryl group, a heteroaryl 8 1 8 2-8 2-8 group, or heterocycle; X is or ; 9 1 2 D and E are each individually selected from the group consisting of S, NR , CR or CR R ; R is selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C cycloalkyl, 1 8 1 8 3 8 C -C alkenyl, C -C alkynyl, C -C aryl, C -C heterocycle each of which is optionally 2 8 2 8 5 10 5 10 10 11 12 11 11 12 11 12 substituted with halogen, -OR , -NR R , -SR , -S(O)R , -S(O) R , or -S(O) NR R 2 2 ; 4 5 6 7 8 R , R , R , R , and R are each are independently selected from H, hydroxyl, halogen, cyano, 10 11 11 12 11 12 13 12 NO , -OR , -SR , -S(O)R , -S(O) R , -S(O) NR R , C -C haloalkyl, COR , -C(O)OR , - 2 2 2 1 8 11 12 12 11 12 11 12 11 12 11 12 C(O)NR R , -C(O)R , -NR R , -NR C(O)R , -NR S(O) R , -NR C(O)OR , -B(OH) , 5184N-NZ C -C alkyl, C -C cycloalkyl, C -C alkenyl, C -C alkynyl, an aryl group, a heteroaryl group, - 1 8 3 8 2 8 2 8 12 11 12 12 11 12 alkylC(O)-OR , -alkylC(O)NR R , -alkenylC(O)OR , -alkenylC(O)NR R , - 12 11 12 11 12 aryl(CH ) C(O)OR , -aryl(CH ) C(O)NR R , -(CH ) C(O)NR S(O) R , -aryl(CH ) - 2 m 2 m 2 m 2 2 m 11 12 11 12 11 12 C(O)NR S(O) R , -(CH ) S(O) NR C(O)R , -aryl(CH ) S(O) NR C(O)R , or a 2 2 m 2 2 m 2 heterocycle group or a heteroaryl containing 1 to 4 heteroatoms, optionally substituted with 1 to 2 substituents selected from the group consisting of H, hydroxyl, halogen, CF , C -C alkyl, C - 3 1 8 1 C alkoxy, cyano, amino, C -C alkylamino, and C -C alkoxyC -C alkylamino provided at least 8 1 8 1 8 1 8 4 5 6 7 8 one of R , R , R , R , or R is other than hydrogen; 10 11 12 13 R , R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, an aryl group, a 1 8 1 8 2-8 2-8 heteroaryl group, or heterocycle; m = 0 to 6; pharmaceutically acceptable salts thereof; solvates thereof and deuterated forms thereof.
2. A compound according to claim 1, wherein Y is a direct bond.
3. A compound according to any one of claims 1 or 2, wherein W is O.
4. A compound according to any one of claims 1-3, wherein X is ; D is CH and E is S.
5. A compound according to any one of claims 1-4, wherein R is selected from the group consisting of CN, NO , C -C alkyl, aryloxy and halo; each of R and R is independently H or a 2 1 6 C -C alkyl; and each of R and R is H .
6. A compound being represented by the formula II 5184N-NZ wherein B is selected from the group consisting of substituted or unsubstituted pyridinyl and when substituted the substitution is halo or C -C alkoxy in the ortho position to the nitrogen in the pyridinyl ring or can be halo in the meta position when the nitrogen is in the 2-position; mono- substituted or unsubstituted quinolinyl and when substituted the substitution is hydroxyl; mono-substituted or unsubstituted indolyl and when substituted the substitution is C -C alkyl; unsubstituted benzothiopheneyl; unsubstituted thiopheneyl; and unsubstituted biphenyl; Y is a direct bond or Y can be a C -C alkyl when R is CN; R is H, C -C alkyl or C cycloalkyl; 1 6 3-8 R is H, C -C alkyl or C cycloalkyl; 1 6 3-8 R is H; each of R and R is independently H, C -C alkyl or C cycloalkyl; 1 6 3-8 R is selected from the group consisting of CN, NO , aryloxy, and halo; pharmaceutically acceptable salts thereof; solvates thereof and deuterated forms thereof.
7. A compound represented by the formula III 1 4 8 wherein R is H, C -C alkyl or C cycloalkyl; R and R are each independently H, C -C alkyl 1 6 3-8 1 6 or C cycloalkyl; Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl, C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR where R is 2 8 2 8 1 8 1 8 1 8 selected from the group consisting of: H, C -C alkyl, C -C haloalkyl, C -C , alkylaryl, C -C 1 8 1 8 1 8 2 8 alkenyl, C -C alkynyl, cycloalkyl, an aryl group, a heteroaryl group, or a heterocycle; and B is selected from the group consisting of phenyl substituted with at least one member selected from the group consisting hydroxyl, halo, C -C alkoxy, aryloxy; pyridyl substituted with at least one member selected from the group consisting halo and C -C alkoxy and indolyl 5184N-NZ substituted with a C -C alkyl group; pharmaceutically acceptable salts thereof; solvates thereof and deuterated forms thereof.
8. A compound being selected from the group consisting of 5184N-NZ 5184N-NZ 5184N-NZ 5184N-NZ 5184N-NZ and ; 5184N-NZ pharmaceutically acceptable salts thereof; solvates thereof and deuterated forms thereof.
9. A compound according to claim 8 being selected from the group consisting of and ; pharmaceutically acceptable salts thereof; solvates thereof and deuterated forms thereof.
10. A composition comprising a compound according to any one of claims 1-9, pharmaceutically acceptable salt thereof or solvate thereof and pharmaceutically acceptable carrier.
11. A composition comprising a compound according to any one of claims 1-9, pharmaceutically acceptable salt thereof or solvate thereof and another therapeutic agent.
12. A composition according to claim 11, wherein said therapeutic agent is selected from the group consisting of NRTIs, NNRTIs, protease inhibitors, integrase inhibitors, and CCR5 antagonists. 5184N-NZ
13. A composition according to claim 11, wherein said therapeutic agent is tenofovir.
14. Use of a compound represented by the following Formula I: wherein B is selected from the group consisting of aryl, heteroaryl; W is O, S, or NR; Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl, C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR; 2 8 2 8 1 8 1 8 1 8 1 2 3 R, R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C - 1 8 1 C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, an aryl group, a heteroaryl 8 1 8 2-8 2-8 group, or heterocycle; X is or ; 9 1 2 D and E are each individually selected from the group consisting of O, S, NR , CR or CR R ; R is selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C cycloalkyl, 1 8 1 8 3 8 C -C alkenyl, C -C alkynyl, C -C aryl, C -C heterocycle each of which is optionally 2 8 2 8 5 10 5 10 10 11 12 11 11 12 11 12 substituted with halogen, -OR , -NR R , -SR , -S(O)R , -S(O) R , or -S(O) NR R 2 2 ; 4 5 6 7 8 R , R , R , R , and R are each are independently selected from H, hydroxyl, halogen, cyano, 10 11 11 12 11 12 13 12 NO , -OR , -SR , -S(O)R , -S(O) R , -S(O) NR R , C -C haloalkyl, COR , -C(O)OR , - 2 2 2 1 8 11 12 12 11 12 11 12 11 12 11 12 C(O)NR R , -C(O)R , -NR R , -NR C(O)R , -NR S(O) R , -NR C(O)OR , -B(OH) , C -C alkyl, C -C cycloalkyl, C -C alkenyl, C -C alkynyl, an aryl group, a heteroaryl group, 1 8 3 8 2 8 2 8 substituted or unsubstituted aryl or heteroaryl wherein the substituion groups are selected from hydroxyl, amino, alkylamino, arylamino, alkoxy, aryloxy, alkyl, heterocycle, halo, carboxy, acyl, acyloxy, amido, nitro, cyano, sulfonic acid, sulfate, phosphonic acid, phosphate, and 12 11 12 phosphonate, or -alkylC(O)-OR , -alkylC(O)NR R , - 12 11 12 12 alkenylC(O)OR , -alkenylC(O)NR R , -aryl(CH ) C(O)OR , - 11 12 11 12 11 12 aryl(CH ) C(O)NR R , -(CH ) C(O)NR S(O) R , -aryl(CH ) -C(O)NR S(O) R , - 2 m 2 m 2 2 m 2 11 12 11 12 (CH ) S(O) NR C(O)R , -aryl(CH ) S(O) NR C(O)R , or substituted or unsubstituted 2 m 2 2 m 2 5184N-NZ heterocycle or substituted or unsubstituted heteroaryl containing 1 to 4 heteroatoms, optionally substituted with 1 to 2 substituents selected from the group consisting of H, hydroxyl, halogen, CF , C -C alkyl, C -C alkoxy, cyano, amino, C -C alkylamino, and C -C alkoxyC -C 3 1 8 1 8 1 8 1 8 1 8 4 5 6 7 8 alkylamino provided at least one of R , R , R , R , or R is other than hydrogen; 10 11 12 13 R , R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, an aryl group, a 1 8 1 8 2-8 2-8 heteroaryl group, or heterocycle; m = 0 to 6; pharmaceutically acceptable salt thereof; solvate thereof and deuterated forms thereof in the manufacture of a medicament for treating, preventing or inhibiting HIV virus.
15. Use according to claim 14, wherein B is an aryl group.
16. Use according to claim 14, wherein B a heteroaryl group.
17. Use according to any one of claims 14-16, wherein Y is a direct bond.
18. Use according to any one of claims 14-17, wherein W is O.
19. Use according to any one of claims 14-18, wherein X is ; D is CH and E is S.
20. Use according to any one of claims 14-19, wherein R is selected from the group consisting of CN, NO , C -C alkyl, aryloxy and halo; each of R and R is independently H or a C -C 2 1 6 1 6 alkyl; and each of R and R is H .
21. Use of a compound according to any one of claims 14-20, including pharmaceutically acceptable salt thereof or solvate thereof and pharmaceutically acceptable carrier.
22. Use of a compound according to any one of claims 14-20, pharmaceutically acceptable salt thereof or solvate thereof and another therapeutic agent.
23. Use according to claim 22, wherein said therapeutic agent is selected from the group consisting of NRTIs, NNRTIs, protease inhibitors, integrase inhibitors, and CCR5 antagonists.
24. Use according to claim 23, wherein said therapeutic agent is tenofovir. 5184N-NZ
25. Use of compound according to claim 14 represented by the following Formula I: wherein B is selected from the group consisting of; an aryl or heteroaryl group; W is O, S, or NR; Y is a linker moiety selected from the group consisting of a direct bond, O, S, NR, C -C alkyl, C -C alkenyl, C -C alkynyl, C -C alkoxy, C -C thioalkyl, C -C alkylNR; 2 8 2 8 1 8 1 8 1 8 1 2 3 R, R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C - 1 8 1 C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, an aryl group, a heteroaryl 8 1 8 2-8 2-8 group, or heterocycle; X is or ; 9 1 2 D and E are each individually selected from the group consisting of O, S, NR , CR or CR R ; R is selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C cycloalkyl, 1 8 1 8 3 8 C -C alkenyl, C -C alkynyl, C -C aryl, C -C heterocycle each of which is optionally 2 8 2 8 5 10 5 10 10 11 12 11 11 12 11 12 substituted with halogen, -OR , -NR R , -SR , -S(O)R , -S(O) R , or -S(O) NR R 2 2 ; 4 5 6 7 8 R , R , R , R , and R are each are independently selected from H, hydroxyl, halogen, cyano, 10 11 11 12 11 12 13 12 NO , -OR , -SR , -S(O)R , -S(O) R , -S(O) NR R , C -C haloalkyl, COR , -C(O)OR , - 2 2 2 1 8 11 12 12 11 12 11 12 11 12 11 12 C(O)NR R , -C(O)R , -NR R , -NR C(O)R , -NR S(O) R , -NR C(O)OR , -B(OH) , C -C alkyl, C -C cycloalkyl, C -C alkenyl, C -C alkynyl, an aryl group, a heteroaryl group, or 1 8 3 8 2 8 2 8 12 11 12 12 11 12 -alkylC(O)-OR , -alkylC(O)NR R , -alkenylC(O)OR , -alkenylC(O)NR R , - 12 11 12 11 12 aryl(CH ) C(O)OR , -aryl(CH ) C(O)NR R , -(CH ) C(O)NR S(O) R , -aryl(CH ) - 2 m 2 m 2 m 2 2 m 11 12 11 12 11 12 C(O)NR S(O) R , -(CH ) S(O) NR C(O)R , -aryl(CH ) S(O) NR C(O)R , or a 2 2 m 2 2 m 2 heterocycle group or a heteroaryl group containing 1 to 4 heteroatoms, optionally substituted with 1 to 2 substituents selected from the group consisting of H, hydroxyl, halogen, CF , C -C 3 1 8 alkyl, C -C alkoxy, cyano, amino, C -C alkylamino, and C -C alkoxyC -C alkylamino 1 8 1 8 1 8 1 8 4 5 6 7 8 provided at least one of R , R , R , R , or R is other than hydrogen; 5184N-NZ 10 11 12 13 R , R , R , and R are each individually selected from the group consisting of H, C -C alkyl, C -C haloalkyl, C -C alkylaryl, C alkenyl, C alkynyl, cycloalkyl, aryl, heteroaryl, or 1 8 1 8 2-8 2-8 heterocycle; m = 0 to 6; pharmaceutically acceptable salt thereof; solvate thereof and deuterated form thereof in the manufacture of a medicament for treating, prevention or inhibiting HIV-1 replication.
26. Use according to claim 25, which comprises inhibiting the viral RT enzyme.
27. Use according to claim 26, which comprises inhibiting HIV strains resistant to NNRTIs.
28. Use of a compound according to any one of claims 1 to 9 or a composition according to any one of claims 10 to 13 in the manufacture of a medicament for the prevention of transmission of a virus from an infected person to an uninfected person. Dated this 8th day of August 2016 SOUTHERN RESEARCH INSTITUTE & SANFORD-BURNHAM MEDICAL RESEARCH INSTITUTE FRASER OLD & SOHN Patent Attorneys for the Applicant
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201161527895P | 2011-08-26 | 2011-08-26 | |
| US61/527,895 | 2011-08-26 | ||
| PCT/US2012/052482 WO2013033003A1 (en) | 2011-08-26 | 2012-08-27 | Hiv replication inhibitors |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| NZ622558A NZ622558A (en) | 2016-09-30 |
| NZ622558B2 true NZ622558B2 (en) | 2017-01-05 |
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