NZ626732B2 - Process for the preparation of (5-fluoro-2-methyl-3-quinolin-2-ylmethyl-indol-1-yl)-acetic acid esters - Google Patents
Process for the preparation of (5-fluoro-2-methyl-3-quinolin-2-ylmethyl-indol-1-yl)-acetic acid esters Download PDFInfo
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P11/00—Drugs for disorders of the respiratory system
- A61P11/02—Nasal agents, e.g. decongestants
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P11/00—Drugs for disorders of the respiratory system
- A61P11/06—Antiasthmatics
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P37/00—Drugs for immunological or allergic disorders
- A61P37/08—Antiallergic agents
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D401/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
- C07D401/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings
- C07D401/06—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings linked by a carbon chain containing only aliphatic carbon atoms
Abstract
The disclosure relates to a process for the preparation of a compound of formula (I) ((5-fluoro-2-methyl-3-quinolin-2-ylmethyl-indol-1-yl)-acetic acid esters) by reacting an indole compound with a 2-quinoline carboxaldehyde. The process is suitable for use on an industrial scale.
Description
PROCESS FOR THE PREPARATION OF (5-FLUOROMETHYLQUINOLlN—2-
YLMETHYL—lNDOL—‘l-YL2-ACETIC ACID ESTERS
The present invention s to a process for the preparation of (5-fluoromethyl—
3-quinolinylmethyl-indol-1~yl)—acetic acid esters and in particular to a high yielding
process which is suitable for use on an industrial scale.
s to compounds which are CRTH2 antagonists and which
are therefore useful in the treatment of diseases and conditions mediated by the
activity of PGDz at the CRTH2 receptor. One particularly useful compound
disclosed in is (5—fluoro-2—methyl—3-quinolinylmethyi—indolyl)—
acetic acid and several studies have been carried. out on this compound, including
clinical trials in man, which have demonstrated that it is effective in ng allergic
rhinitis and asthma, especially eosinophilic asthma and atopic asthma.
(5-Fluoro—2—methyIquinolin—2—ylmethyl—indoly|)-acetic acid esters are
ediates in the preparationof (5-quoromethyl-3—quinolin—2-ylmethyl-indol
yl)-acetic acid. In addition, (5-fluoro—2—methyIquinolinylmethyl-indoIyI)-acetic
acid esters are useful as prodrugs for (5-fluoro—2~methyiquinolinylmethyl—indol-
1-yl)-acetic acid and are therefore useful in ne.
(5-fluoromethylquinolinylmethyl-indol-1—yi)—acetic acid. was first described in
along with a number of other similar compounds. The document
exemplifies a process for the preparation of {3-[1-(4-chloro—phenyl)-ethyl]-5—fluoro-2—
methyl-indoIyl}-acetic acid and teaches that other compounds in the series were
prepared by ous methods.
According to Example 1 of , {3-[1—(4-chloro-phenyl)-ethyl]—5—fluoro-
2-methyl-indol-1~yi}-acetic acid was prepared in the ing steps:
i. (5-fluoro-2—methyl—indol—1—yl)—acetic acid ethyl ester and 4—
acetylchlorobenzenze were reacted together in the ce of trifluoracetic acid
and triethyl silane in the solvent 1,2—dichloroethane to give (4-chloro-phenyl)-
ethyl]fluoromethyl-indolyl}-acetic acid ethyl ester;
ii. the ester was hydrolysed using lithium hydroxide in a mixed tetrahydrofuran
and water solvent to give the product.
relates to a microcrystalline form of 5-fluoromethyl-3—quinolin
ylmethyl-indoIyI)-acetic acid. This document teaches that the compound can be
prepared according to the method shown in Scheme 1.
Scheme 1 — Process for the ation of oromethylquinolin-2—
ylmethyI-indolyI)-acetic acid
Stage1
F BrACO El F
- {j choz, CH3CN, A ’3
EtOQC
FW:149.17
CQHBFN FW: 235.25
CiSHMFNOZ
Sta99 2
FW:157.17
F \ C1°H7NO
'3 o
———————-’-
EtOZC TFA, , CHZClz
FW:376.43
C23H21FN202
Stages
/ \
F 1. KOH. THF, H20
0 \ m’
N /2'HC'laqi
EtOZC
FW: 376.43 Fw: 348.38
C23H21FN2O2
, C21H17FN202
However, this process is a laboratory scale process and gives very modest yields of
the target compounds. lf (5-fluoromethylquinolin-Z-ylmethyl-indolyl)-acetic
acid is to be sold as a pharmaceutical, it is necessary to devise an economically
viable s for its production on an industrial scale. Such a process must be
high yielding and be capable of being operated at 100kg scale or greater.
As can be seen from Scheme 1, the process of is a three stage
process. Stage 2 of the process is of particular interest as it is low yielding:
Example 1 of teaches that Stage 2, where (5-fluoros2-methyl-
indol-l -yl)-acetic acid ethyl ester was reacted with quinolinecarboxaldehyde, gave
a product in 134% of the theoretical yield because the product was contaminated
with silylated by-products. The products of both the Stage 2 process bed in
and the Stage 2 process analogous to that described in WO
2005/044260 contain several impurities which are difficult to remove. Since (5-
fluoro—2—methylquinolin—2—ylmethyl—indol~1-yl)—acetic acid is gly soluble in
most solvents and is therefore difficult to purify by llisation, it would be highly
ageous if the precursor ester could be ed in a pure state.
Stage 2 of the process of Scheme 1 involves two different chemical reactions: firstly
IS the reaction of the indole ester with quinoline carboxaldehyde under acidic
conditions to give an intermediate alcohol (which is actually a racemic mixture of two
enantiomeric alcohols); and secondly the reduction of the alcohol to give the
ed Stage 2 product as shown in Scheme 2.
Scheme 2 - Stage 2 of the Process of Scheme 1
\ \
CH3 CFacOZH
N / H ——_———_————>
\\ N
cr—iZCi2
CF3C02HIEtSi3H
+ CFSCOOSiEt3 + H20
In the process bed in W0 20061092579, these two processes are carried out
in a single step in which the reducing agent triethyl silane and trifluoroacetic acid are
sequentially added dropwise to a solution of the starting ester and 2-quinoline
carboxaldehyde in dichloromethane at 0-5°C and then O-10°C; following which the
reaction mixture is stirred for 3 hours at reflux.
The procedure described in is very similar and again both stages
of the reaction are carried out in a single step. In this case, triethylsilane and
trifluoroacetic acid are sequentially added dropwise to a stirred solution of (5-fluoro-
2-methyl-indol-t-yl) acetic acid ethyl ester and the relevant aldehyde or .ketone in
1,2,-dichloroethane at 0°C. The mixture is then allowed to warm to room
temperature and stirred for 16 hours. ln example 1 of , the yield of
the product ester was only 37%. ‘
r, the inventors have discovered that many of the problems associated with
this method for conducting Stage 2 of the s arise from the low ity of the
intermediate l under the conditions described in and WO
2006/092579 and the low reactivity of the intermediate alcohol towards the reducing
agent
The present inventors have investigated the properties of the alcohol and have
developed an ed process for Stage 2 of Scheme 1.
Therefore, in the present ion, there is provided a process for the preparation of
a nd of formula (l):
wherein R1 is C1-C5 alkyl or benzyl;
the process comprising
2012/000903
i. reacting a compound of formula (ll):
(ll)
wherein R1 is as defined for formula (I);
with 2-quinoline carboxaldehyde under acidic conditions and at a temperature of s
°C;
to give an acid addition salt of a compound of formula (ill):
wherein R1 is as defined for formula (I);
ii. when the reaction of step (i) is substantially complete, treating the acid
on salt with a base to obtain the alcohol of formula (III), while maintaining the
temperature at s 10°C; and
iii, reacting the compound of formula (lll) with a reducing agent to give a
compound of formula (l).
The process of the ion is much higher yielding than the process bed in
, with the yield being, in general, about 70—80% after step (iii).
Furthermore a purer product is obtained, which is important because the compound
of general formula (l) is a pharmaceutical intermediate. Using the process of the
invention, it is possible consistently to obtain a product of general a (l) which
contains total impurities at a level of s 1.0% area by HPLC, with the amount of
compound of formula (lll) being t at s O. 5% area (as the sum of the two
enantiomers), and in some cases even lower than this.
2012/000903
As described above, the compound of general formula (l) is a precursor of
carboxylic acids having CRTH2 antagonist activity. The intermediate of general
formula (ill) is very difficuit to remove by crystallisation from the indoie acetic acid
product and therefore it is very important to minimise the amount of the compound
of l formula (ill) in the product of general formula (l).
in the process described above, where values for amounts of various compounds
are expressed in terms of % area, this refers to the percentage of the area of the
peak enting a particular le on an HPLC chromatogram. Thus, the
product of general formula (I) contains total impurities at a level of S 1.0% area by
HPLC when the sum of the area of all the other peaks of the chromatogram is less
than 1.0% of the total area of the HPLC chromatogram. The HPLC method by
which the % area of the nds of’generai formulae (i), (ii) and (Ill) were
determined in the process of the invention is described in detail in the Examples
below.
in the process described above the group R‘ is generally C1-C4 alkyl, more usually
methyl or ethyl and especiatiy ethyl.
The reaction of step (i) may be carried out in an organic solvent, for example a
halogenated solvent or an acetate such as ethyl acetate, an aromatic solvent such
as toluene or acetonitrile or a combination of these. More suitable solvents e
halogenated solvents such as dichloromethane or 1,2-dichloroethane, with
dichloromethane being particularly suitable.
The acidic ions ed in step (i) may be provided by any acid, which may be
either a Bronsted-Lowry acid or a Lewis acid but especially a strong acid.
Trifluoroacetic acid (TFA) has been found to be particularly suitable. A strong acid
such as TFA will generally be present in excess, for example a molar excess of 21.5
and more usually 2 2 moles of acid per mole of compound of formula (ll).
As set out above, the reaction temperature for step (i) is s 10°C. However, more
suitably, the ature is s 5°C and is usually about 0—5°C.
it is ant to ensure that the reaction of step (i). is substantially complete before
proceeding to step (ii). This is because any remaining compound of formula (II) present
during step (iii), and the ediate alcohol of a (III) can also react to give a bis-indolyl
compound which, in turn gives rise to a number of other impurities which are difficult to
separate from the compound of formula (I). The yield of the compound of general formula (III)
may be increased and thus the amount of residual compound of general formula (II) d
by the use of a molar excess of 2-quinoline carboxyaldehyde in step (i). The number of
equivalents of 2-quinoline carboxaldehyde is typically slightly in excess and, for example the
number of equivalents of 2-quinoline carboxyaldehyde to compound of formula (II) may be
about 1.05:1 to 1.5:1, typically about 1.1:1.
Since is ant to ensure that the reaction of step (i) is substantially complete, i.e. that the
amount of starting material remaining is minimal, before cing the neutralisation
process of step (ii), the amount of starting material remaining in the reaction mixture may be
monitored, suitably by HPLC. It is well within the scope of a person of skill in the art to devise
an HPLC method suitable for monitoring the reaction. The reaction of step (i) may be
considered to be substantially complete when the amount of starting material of formula (II)
remaining in the reaction mixture is ≤ 2% area by HPLC, more suitably ≤ 1.5% area by HPLC
and particularly not greater than 1.0% area by HPLC. A suitable HPLC method for ring
the reaction is described in the Examples below.
The product of step (i) is the acid on salt of the intermediate l of formula (III). For
example, when TFA is used as the acid in step (i), the acid addition salt will be the
trifluoroacetate salt.
An aspect of step (ii) is to obtain a neutral form of the compound of formula (III). The reason
for this is that the compound of formula (III) is unstable under acid conditions and when
attempts were made to carry out the reduction of step (iii) without a neutralising step, it was
found that the compound of general formula (III) degraded and that various side products
were obtained in icant amounts. The side products included an oxidation product – a
ketone ester and various dimeric compounds.
The l of a (III) is stable under neutral conditions, r. Therefore,
2012/000903
although the reduction of step (iii) is usually carried out under acid conditions, the
alcohol of formula (lll) is suitably added to the reduction mixture slowly, for example
over several hours, so as to ensure that there is never an excess of the alcohol of
formula (lit). in this way, the degradation of the alcohol of formula (lll) under the
acid conditions used for the reduction step can be avoided. The major product is
the desired product of formula (l) with only minor amounts of the ketone ester
oxidation t and minimal amounts of dimeric impurities. in addition, the
reaction proceeds much more rapidly.
it has been found that reduction of the neutral form of the alcohol of formula (lll)
proceeds more satisfactorily if the l of formula (III) is substantially pure.
indeed, when a crude form of the alcohol of formula (lll) is treated with triethylsilane,
little reaction is observed after l hours of stirring at 0°C. When the
temperature is increased to room temperature, the on yields mainly the ketone
ester oxidation product; though small amounts of high molecular weight impurities
are also present. r, no compound of formula (l) is obtained. in st, a
purified form of the neutral alcohol of formula (lll) reacts with a ng agent such
as triethyl silane under acid conditions as described above to give a high yield of the
compound of formula (l) with only trace amounts of the ketone ester oxidation
product and no other impurities. Furthermore, the reaction proceeds to completion
and is thus very high yielding.
it is therefore important 'to ensure that the product of step (ii) is obtained in as pure a
form as possible in order to ensure that step (iii) proceeds to completion and yields a
pure product. Therefore, in order to obtain a substantially pure compound of
formula (ill), step (ii) may include the removal of impurities from the compound of
formula (iii).
In step (ii), the compound of formula (ill) may be ed from its acid addition salt
by neutralisation of the reaction mixture, Any le base may be used in step (ii)
to neutralise the nd of general formula (ill) but typically an aqueous base is
used, for example sodium, potassium or ammonium hydroxide. Aqueous potassium
hydroxide has been found to be a particularly ient choice of base as it is
y available at relatively low cost.
in this ment, removal of impurities may be achieved by washing the reaction
mixture with water or an aqueous solution of, for example, an inorganic salt to
remove any water soluble impurities remaining in the on mixture. This may be
done before and/or after, but more suitably after, neutralisation of the reaction
in an alternative embodiment, the ediate alcohol of general formula (III) may
be isolated before proceeding to step (iii). lsolation of the alcohol may be achieved
by removal of the acid salt product of step (i) from the reaction mixture, for example
by filtration, when the reaction of step (i) is substantially complete A person of skill
in the art would be aware of a number of methods ofmonitoring the reaction in order
to determine when it is substantially complete. One such method is HPLC and, as
set out above, the on of step (i) may be considered to be substantially
complete when the amount of compound of formula (ll) remaining in the reaction
mixture from step (i) is s 1.0% area of the HPLC chromatogram. The isolated acid
salt may then be treated with a base to give the free alcohol of general formula (lll),
which may then be dissolved in an appropriate solvent for use in step (iii). Any
suitable base may be used but typically an aqueous base is used, for example
sodium, potassium or ammonium hydroxide, more usually aqueous sodium or
potassium hydroxide. s potassium hydroxide has been found to be a
particularly convenient choice of base as it is readily available at relatively low cost.
le solvents for step (iii) are described below.
In both embodiments, it is preferable to maintain a low temperature during the
neutralisation and isolation and/or washing steps in order to avoid decomposition of
the ediate alcohol of formula (lll) and/or to limit side reactions before the
neutralisation is complete.
ln step (iii), triethylsilane has been found to be a particularly suitable reducing agent
and, in this case, the reaction is carried out under acidic conditions, for e in
the presence of trifluoroacetic acid. Suitably, the reduction of step (iii) is carried out
at the reflux temperature of the solvent, which is ly a halogenated organic
solvent such as dichloromethane or 1,2,—dichloroethane.
Other reduction methods may also be used, for example hydrogenation, typically
using a metal catalyst such as ium or piatinum.
When triethylsilane is used as the reducing agent the molar ratio of triethylsilane to
compound of formula (it) may be from 3:1 .to 6:1. for example 3.521 to 5:1, suitably
4:1 to 5:1 and typically about 4.4:1. A triethylsilane reduction is usually carried out
under acid conditions which may be provided, for example by the addition of
trifluoroacetic acid, typically with excess reagent compared to the compound of
general formula (II). For example, the number of lents of trifluoroacetic acid
to compound of formula (II) may be from about 2:1 to 4:1, for example 2.921 to 3.5:1.
The reaction may be carried out under reflux and in the same solvent as for the
previous steps. As ned above, it is important that the compound of formula
(III) is added slowly to the reducing agent and ore the on will typically be
carried out over several hours, for example about 4-10 hours, suitably 578 hours and
more suitably about 6 hours.
Conveniently, in step (iii), the alcohol of formula (lll) is added slowly to the ng
mixture. This avoids the up of the alcohol intermediate in the reaction mixture
and lessens the chance of undesirable side reactions.
The compound of formula (III) is difficult to remove by crystallisation and therefore it
is preferable to ensure that the reduction reaction of step (iii) proceeds to completion
such that substantially no alcohol of general formula (Ill) remains before proceeding
to work-up. As with the other reaction steps, the progress of the reaction can be
monitored by any suitable method, for example a chromatography method such as
HPLC, for example the method set out in the examples below. ln step (iii), the
on is substantially complete when not more than 0.5% area by HPLC aicohoi
remains before proceeding to p. In some cases, levels of alcohol lower than
this may be ed, for example 50.3, 50.25%, s 0.2%, 50.15% or even 5 0.1%
area by HPLC.
As set out above, step (iii) may be carried out using the solution of the compound of
formula (lll) obtained after neutralisation and, optionally washing with water.
in another embodiment, however, the alcohol of formula (lll) is ed and purified
as described above before step (iii).
in a further aspect of the invention, there is provided an isolated and purified
compound of formula (III) as defined above.
The process of the invention may include the onal step of:
(iv) ing and purifying the compound of formula (i).
it has been found that most of the major impurities from the process can be
removed from the reaction e simply by a work-up procedure involving
aqueous washes ed by crystallisation.
Therefore, step (iv) of the process may se the step of washing the reaction
mixture from step (iii) with water or an aqueous solvent to remove water soluble
impurities after the reduction is complete,
Step (iv) may also comprise the step of crystallising the compound of formula (l) in a
suitable solvent, typically a solvent such as ethanol or toluene or mixtures of these.
Ethanol is a particularly suitable stallisation solvent. The overall yield of the
process including the crystallization step is lly about 65-70%.
As set out above, the compound of formula (l) is an intermediate in the production of
(5-fluoromethyl-3—quinolin~2~ylmethyl~indoi~1 -yI)-acetic acid and therefore in a
further aspect the process of the invention includes the additional step of:
(v) converting the nd of formula (l) to (5-fluoromethylquinOlin
ylmethyl-indol-i-yl)—acetic acid, the process comprising hydrolysing the compound of
formula (I).
Either acid or base hydrolysis of the compound of formula (I) may be used, although
base hydrolysis is particularly suitable.
Typically, hydrolysis will be conducted in aqueous solution using a strong base such
as lithium, sodium, potassium or ammonium hydroxide, more usually lithium, sodium
or potassium hydroxide. Potassium hydroxide is, however, particularly le.
Suitably the base will be a 50% aqueous potassium hydroxide solution.
The amount of base used is typically 1.5 to 4 molar equivalents of the compound of
formula (I). ly, the molar ratio of base: compound of formula (I) is about 2:1.
Step (v) may be carried out at elevated temperature, for example 50 to 75°C, more
usually 55°C to 65°C and typically about 60°C.
After. hydrolysis is te, the pH of the reaction mixture may be adjusted to about
pH 6.5-7.5 in order to precipitate the product. If base hydrolysis has been used, the
reaction mixture may be acidified using any le acid, for example mineral acids
such as hydrochloric, ric or phosphoric acids, organic acids such as formic
acid or a similar aliphatic carboxylic acid. Hydrochloric and formic acids are
particularly suitable for this purpose. The solid product may be isolated by any
suitable process, for example filtration.
In addition, the process may ally comprise the step of washing the reaction
mixture with an organic t before acidification. Suitable solvents include, for
example, chlorinated solvents such as dichloromethane and non-chlorinated
solvents such as 2-methyltetrahydrofuran. This step is particularly useful for
removing neutral or basic organic impurities which are not soluble in the potassium
hydroxide solution. It has also proved useful for removing unreacted ester of
general formula (I).
it has been found that, following the‘improvements to Stage 2 accorded by the
s of the ion, the product of step (v) can belobtained in a form which is
sufficiently pure for use as a pharmaceutical, so that further purification is
unnecessary.
In order to obtain the starting material of l formula (ll), the process may
include additional steps before step (i).
Therefore, in a further aspect, the invention includes, before step (i), a process for
the ation of a compound of formula (II) comprising:
Reacting 5-fluoro-2—methyl indole with a compound of the formula (IV):
X-CHz—COOR1 (IV)
where X is a leaving group, for e a halo group such as bromo and R1 is as
defined for a (I).
The on may take place in the presence of a weak base such as potassium or
caesium carbonate, more usually caesium carbonate, in a polar organic solvent
such as acetonitrile.
Suitably the amount of solvent used is from 7 to 30 L of t per kg of 5-fluoro-2—
methyl indole, more usually from 7 to 20 L, for example about 7 to 15 L and suitably
aboUt 10 L of solvent per kg of 5—fluoro—2—methyl indole. '
The reaction may be conducted at a temperature of from about 15 to 30°C, more
y 20—25°C over a time of 10 to 36 hours, typically 18 to 30 hours, for example
about 24 hours and the progress of the reaction may be monitored, for example by a
chromatography method such as gas chromatography (GC).
When the reaction is complete, the compound of formula (II) may be isolated and/or
purified in order to remove impurities such as 5-fluoromethyl indole and
compound of formula (W). Alternatively, purification of step (iv) may be sufficient
The presence of inorganic salts derived from the starting material of general a
(IV) is undesirable. inorganic salts may be removed by washing the reaction
mixture with water while maintaining the product of formula (II) in the organic phase.
When a solvent such as acetonitrile is used as the reaction t, it may be
advantageous to replace it at this stage with an alternative, less polar, solvent such
as toluene.
The invention will now be described in greater detail with reference to the es.
In the es, the following abbreviations are used:
TFA Trifluoroacetic acid
TES Triethyl silane
Et Ethyl
DCM dichloromethane
in the examples set out below, and in the whole specification values for amounts of
various compounds are expressed in terms of HPLC % area. This refers to the
percentage of the area of the peak representing a particular molecule on an HPLC
trace. The HPLC parameters are summarised below.
: YMC basic 150 mm x 4.6 mm, 5 pm
Injection volume: 5 pL
Detection: UV @ 220 nm
Mobile Phase:
Mobile phase A: 0.1M ammonium formate pH 4.0 : water : ol (1 :6:3)
Mobile phase B: 0.1M ammonium e pH 4.0 : methanol (1:9)
Gradient:
Flow rate: 1 mL/min
Temperature: 40°C
Run time: 37 min (including a 5min re-equilibration step)
Sample diluent: Acetonitriie
Quantification: % area
Example 1 — Investigation of s of for the Preparation
of 5-fluorometh t n-Z- lmeth l-indol ic acid eth lester
As illustrated in Scheme 2 above, Stage 2 of the process for preparing (5-fluoro
methylquinolinylmethyI-indoly|)-acetic acid involves two chemical reactions:
firstly the indoie acetate reacts with quinoline carboxyaldehyde under acidic
conditions to give the intermediate alcohol of formula (III); then the alcohol of
formula (Iii) is reduced with TFAfTES. This is shown in the reaction scheme below,
where R1 is ethyl and the Stage 2 Product is (5-fluoro—2—methylquinolin-Z-
2012/000903
yI-indol-l -y|)-acetic acid ethyl ester.
\ \
CH3 + CF3C02H
N /
\\COZEt o
CFacOQH/EtSSiH
+CF3COOSiEt3 + H20
According to the process described in , all the reagents except the
TFA are added to the reaction vessel and then the acid is slowly added g to
the condensation of the indole acetate with the quinoline carboxaldehyde. The
obtained alcohol is then slowly reduced.
We have ered that the main problems with this procedure are related to the
low stability of the intermediate alcohol at room temperature in acidic conditions and
its low reactivity toward the TES reduction. When the reduction is performed
ing to the process of WO 2006/092579 or WO 44260 (batch
conditions); the intermediate’alcohol is maintained for a long periOd of time at room
ature in acidic conditions leading to the formation of alcohol degradation
impurities.
in order to circumvent this problem, alternative process implementation was studied.
Preparation of the Intermediate Alcohol of Formula (Ill)
This compound was easily prepared by slowly adding at about 0°C the TFA (2 eq.)
to a mixture of 5-fluoro—2-methyl—indole N-ethyl acetate (in 2 vols of toluene) and
quinoline carboxaldehyde in methylene chloride. Despite the fact that this reaction
is theoretically acid catalyzed, the use of less than 2 equivalents of TFA led to an
incomplete reaction even after an extended reaction time.
The intermediate alcohol crystallized during the TFA addition or at the beginning of
the holding time. The time of the crystallization can vary depending on the quality of
the indole e d (crude or pure) and on the amount of toluene in the
crude indole acetate solution. The filtration of the suspension gave the alcohol in 79
% yield. This isolated material contained 1 eq of TFA and was probably the salt of
the alcohol.
The pure ree alcohol can be obtained by neutralization of the previously
isolated material with diluted potassium hydroxide, extraction in methylene chloride
and concentration.
Stability of the Intermediate Alcohol
Several studies were performed in order to determine the ity of this alcohol. its
behaviour was very different depending upon its purity, the temperature and the
y of the mixture.
A. Pure alcohol isolated as a TFA salt
At 0°C in 9 vol. of DCM the pure l (TFA salt) is not soluble and the mixture is
a suspension. The on was monitored by HPLC which showed that the
degradation is slow; leading mainly after 6 h of stirring to the formation of a dimer
(1.7 %), some ketone ester and some Stage 2 Product. The ketone ester has the
structure:
Increasing the amount of TFA (additional 1 equivalent) led to the full dissolution of
the alcohol which degraded slightly faster leading, after 6 h to another dimeric
impurity (2 to 3%) and some ketone ester + Stage 2 Product (2 to 3 % each).
At room temperature, the pure alcohol (TFA salt) ed more quickly leading
after 6h to the second dimeric impurity (5 to 6%), the ketone ester and the Stage 2
3O Product (8 to 10 % each).
Increasing the amount of TFA led to a faster degradation with several late g
impurities and small amounts of the ketone ester and the Stage 2 Product.
In conclusion, it appears that in acidic conditions (TFA) the alcohol degrades leading
to a number of impurities in the window 25-28 minutes elution time (HPLC). Some
ketone ester and Stage 2 Product may also be detected depending on the
conditions. The rate of degradation increases with increasing temperature and
increasing amount of TFA in the mixture.
B. Crude Atcohol isolated as a neutral Dichloromethane Solution
At 0°C, no change in the HPLC profile was ed after several hours of stirring.
At room temperature, after 16 hours the main ty was the ketone ester (11%)
but no Stage 2 Product was observed. Very small amounts of late eluting impurities
were observed (<0.5% each) but stingly, the peak of the remaining quinoline
carboxaldehyde had disappeared. The repetition of this trial with some TES or
under nitrogen gave the same result.
At higher temperature (70°C) the degradation was much taster leading to the ketone
ester (44 % after 20 h) and the Stage 2 Product (26 %). The ce of both
ketone ester and Stage 2 Product suggests that" in some conditions a
disproportionation of the alcohol occurs.
C. Pure Alcohol under l Conditions
At room temperature in 10 vols of methylene chloride a 0.1% se of the ketone
ester content was observed after 16h of stirring. Under reflux conditions (45°C),
HPLC showed an increase of about 1% of the ketone ester t after 18 hours.
in both cases, no other impurity was detected.
ln conclusion, it appears that in acidic conditions (TFA) the alcohol degrades leading
to a number of impurities in the window 25-28 minutes elution time (HPLC). Some
ketone ester and Stage 2 Product may also be detected depending on the
conditions. The rate of degradation ses with increasing temperature and
increasing amount of TFA in the mixture. The solubility of the alcohol might also play
a role in the kinetic of degradation. At 0°C with a low amount of TFA, a suspension
is obtained. whereas with more TFA and l or higher temperature the mixture is a
solution and the alcohol is more available to react.
Following these observations, we concluded that modification of the process
described in would be desirable in order to avoid extended stirring
time of the alcohol in acidic conditions at room temperature. Certain variations of
the process were therefore .
e 2 —- igation of Alternative Processes for the Preparation of (5-
fiuoro-Z-meth i uinolin-Z- imeth i-indol—1- i-acetic acid eth tester
A. Charging a Mixture of lndole Acetate and ine Carboxaldehyde
onto TFAITES
This process modification is based on literature data (Tet. Lett, 34, 1529 (1993).
According to this publication, the indole derivatives and the aldehyde are mixed and
charged to a cold mixture of TFA / TES. As we know that at low temperature the
TES ion of the alcohol is very slow we attempted to perform the addition in
methylene chloride under reflux.
The yield and purity of reaction product from this approach was poor. The main
impurity was the bis-indolyl compound of structure:
(LC-MS identification) resulting from the on of the intermediate alcohol with the
indole e. There is precedent in the literature for this behaviour (eg See A.
Mahade_an et al. I Tetrahedron s 44 (2003) 4589—4591).
In addition to the bis—indolyl impurity there was also a icant amount of late
eluting impurities and therefore this modification was not pursued. Running the
reaction at 0°C does not e the profile but leads to a very long reaction time
B. Addition of the alcohol suspension to the reduction mixture
The alcohol salt (prepared as bed in Example 1) was transferred to the
reduction e (TFA / TES in DCM). Several trials were performed in order to
determine the best reduction temperature and the transfer flow to limit alcohol
accumulation in the reduction e. The experiments showed that the reduction
mixture should be held under DCM reflux and the transfer time should not be less
than B h.
Under these conditions the alcohol accumulation in the reduction mixture was low
(less than 5 area %) so that the formation of the impurities was limited. The HPLC
profile showed greater than 90 % of Stage 2 Product. However the drawback of this
procedure was the slow, flow-regulated transfer of a suspension. Moreover, even
though the alcohol was found to be quite stable in these ions, the impurities
generated under acidic conditions were more difficult to remove than the ones
generated under neutral conditions.
It was therefore decided to e the free alcohol as a DCM solution.
C. Transfer of the alcohol as a solution onto the ion mixture
After the preparation of the intermediate alcohol, an aqueous work up (neutralization
with potassium hydroxide followed by aqueous wash of the organic phase) led to a
solution of the alcohol in DCM. This solution which was kept at 0°C was then
transferred onto the reduction mixture (TES I TFA at the reflux temperature of
DCM). As described previously, this transfer was slow in order to avoid the
accumulation of the alcohol. The solution was not dried as the l is not stable
at high temperature even under neutral conditions. The chemical purity at the end of
the reduction was very similar compared to that ed in 8 above.
D. Reaction with an isolated alcohol
Surprisingly, the pure isolated alcohol (Ill) underwent very fast (2h) reduction to the
3O Product (I) at room temperature. The chemical purity of the on mixture was
also very high (>98 %).
The following examples refer to a laboratory scale mental protocol but were
carried out on a larger scale.
e 3 - Preparation of 5-fluoromethyI-indole N-ethyl acetate (Stage 1)
WO 88108
Experimental Protocol
into a reaction mixture of 1.0 Kg of 5-fluoromethyiindoie (1.0 eq., 6.70 moi) and
0.99 kg of caesium ate (3.02 mol -— 0.45 eq.) with 9 L acetonitrile is added at
-25°C over ~12 h a solution of 1.34 kg ethylbromoacetate (8.04 mol —— 1.2eq.) in
1L acetonltrile. Two additional charges of 0.99 kg caesium carbonate each are
added after 4 hours and after 8 hours of reaction (3.02 moi - 0.45 eq.). A final
charge of 0.33 kg m carbonate is added (1.01 moi ~ 0.15 eq.) and 0.056 kg of
ethyl bromoacetate (0.335 moi — 0.15 eq.) are added after 18 hours. The reaction
mixture is maintained under agitation at 20-25 °C until the reaction is substantially
complete. 5 L of water is added to dissolve the inorganic salts. The agitation is
maintained at 20—25°C until complete dissolution of the inorganic salt then the
on mixture is allowed to settle. The organic phase is concentrated to 3 L.
Toluene (5 L) is added then the mixture is concentrated to 3 L. Toluene (5 L) is
added to the reaction mixture; which is then washed with water (3 L) to eliminate the
residual salts and concentrated to 3 L under vacuum. Expected Yield: 5kg
(9015%).
Scaled Up Method
The above method was carried out with a batch size of 234 kg of 5-fiuoro—2—methyl
. The quantity of (5»fluoro-2— methylindoi~1~yl)—acetic acid ethyl ester
recovered was 337 kg, a yield of 91.3 %; which compares well with the expected
yield of 90i5%.
Exam ie 4—Pre aration of 5-fluoro-2~meth l—3- uinolin imeth l-indol-‘l- l-
acetic acid ethyl ester (Process Stage 21
Experimental ol
1.00Kg of (5-fiuoro~2— methylindol—l-yl)-acetic acid ethyl ester in 1.83kg toluene is
added to 0.73Kg of ine carboxaldehyde (1.10 equivalents) and 6.0L of
methylene chloride. The solution obtained is cooled to a temperature below 5°C and _
0.97Kg of TFA (2 equivalents) is added over approximately 2h. Once the reaction is
substantially complete, the suspension obtained is neutralized to pH = 6-8, keeping
the temperature below 5°C, by adding an aqueous solution of KOH of approximately
% w/w. After settling, the organic phase, held at cool temperature, is separated
and washed with 2.0L of deionised water. The organic phase obtained is added
over approximately 6h to a solution of 2.17Kg of triethylsilane (TES) (4.4equivalents)
with 1.50Kg of trifluoroacetic acid (TFA) (3.1 equivalents) in 2.0L of DCM at reflux.
After rinsing the vessel with 1.0L with DCM, the reaction mixture is maintained at
reflux until substantially te. The on ed is cooled to 0-5°C and
.0L of deionized water (5.0vol) are added.
After settling, the aqueous phase is washed with 1.0L of DCM and the pH of the
combined organic extracts is adjusted to 6-7 with a solution of KOH (10% w/w) at a
temperature of 0-5°C. When the desired pH is reached, 1.0L of a solution of K2003
(25% w/w) is added and the biphasic mixture obtained is filtered through celite. After
g the equipment with 1.0L of DCM, the mixture is allowed to settle and the
aqueous phase is extracted with 2.0L of DCM at O~5°C. The combined organic
phases are washed with 2 x 3.0L of deionized 'water at O-25°C.
The organic phase is trated at atmospheric pressure to a residual volume of
3.5 L, keeping the temperature below 80°C. After dilution with 3.5L of ethanol, the
mixture is concentrated at atmospheric pressure to a residual volume of 3.5 L
keeping the temperature below 80°C. The on is again diluted with 3.5L of
ethanol and the mixture is concentrated at atmospheric re to a residual
volume at 3.5 L keeping the temperature below 80°C.
After confirming the toluene content is not more than 5% wlw, the mixture is cooled
to 0-5°C then held at this temperature for 1 to 2h. The mixture is then filtered and
washed three times with 2.0L of ethanol (pre- cooled to 0-5°C). After confirming the
residual silane content is not more than 1%w/w, the crude product is dried at 45 °C
under vacuum.
The crude product is ved in 12L of ethanol at reflux, clarified by filtration
through celite at a temperature of not less than 65°C and the equipment is rinsed
with 1.0L of ethanol at reflux (1.0 vol). The on obtained is cooled to (SO—65°C,
seeded and held for 1h at this temperature. The mixture is cooled to 0-5°C and held
at this temperature for 2h. The suspension obtained is filtered and washed with
2x1 .OL of ethanol cooled to O-5°C then the product is dried under vacuum at 45°C.
The weight of the dry product varied between runs from 1.04 to 1.28Kg (65 -
80%Yield)
Scaled Up Method
The process bed above has been scaled up to a batch size of 300 kg of (5-
fluoro—2- methylindol-1—yl)—acetic acid ethyl ester. The recovered weight of crude (5—
fluoromethyl—3-quinolinylmethyl-indolyl)-acetic acid ethyl ester was 359 kg.
The corresponding yield is 74.8%.
The product was recrystallised from ethanol (12 volumes) with hot tion through
celite, at a temperature of not less than 65°C. The weight of product recovered was
g — a yield of 93.1% for the re-crystallization step. The overall yield for the
reductive alkylatlon was therefore 70%
Exam le 5 -Pre aration of 5-fluoro—2-meth l uinolin lmeth l-indol l-
acetic acid ss Stage 3)
The product of Example 2 was hydrolysed to give 5—fluoro-Z-methyl-B-quinolin-Z-
ylmethyl-indol~1-yl)-acetic acid using a procedure similar to that set out in
W02005/044260, which was as follows.
To 0.598 Kg of 50% aqueous ium hydroxide (2 equivalents w.r.t. (5-fluoro
methylquinolinylmethyl-indol41-yl)-acetic acid ethyl ester) is charged 9 L of
purified water. into this solution add 1 Kg of (5-fluoromethylquinolin-2—ylmethyl-
indolyl)—acetic acid ethyl ester (2.656 Moles). The reaction mixture was heated to
60°C and held until completion of the ester hydrolysis reaction. The reaction mixture
is homogenous (solution is turbid) at the end of the reaction.
After work up, the product, (5-fluoro—2—methylquinolin-Z-ylmethyl-indolyl)—acetic
acid was isolated and found to contain impurities in an amount of s 1.5% area of an
HPLC togram. The yield for Stage 3 varied between about 91 and 99.5%.
The overall yield for Stages 1 to 3 of the process was 56%, substantially greater
than that obtained using previous Stage 2 processes.
- 22a -
The reference in this specification to any prior publication (or ation derived from it), or to
any matter which is known, is not, and should not be taken as an acknowledgment or
admission or any form of suggestion that that prior publication (or information derived from it)
or known matter forms part of the common general knowledge in the field of endeavour to
which this ication relates.
Throughout this specification and the claims which follow, unless the context requires
otherwise, the word "comprise", and variations such as "comprises" and "comprising", will be
understood to imply the inclusion of a stated r or step or group of integers or steps but
not the exclusion of any other integer or step or group of integers or steps.
Claims (22)
1. A process for the preparation of a compound of formula (I): wherein R1 is 01-06 alkyl or benzyl; the process comprising 10 i. reacting a compound of formula (ll): LCOZR1 (ii) wherein R1 is as defined for formula 0); with 2—quinoline carboxaldehyde under acidic conditions and at a temperature of s 15 10°C; to give an acid on salt of a compound of formula (ill): (Ill) n R1 is as defined for formula (l); ii. when the reaction of step (i) is substantially complete, ng the acid addition salt with a base to obtain the alcohol of formula (III), while maintaining the temperature at s 10°C; and iii. reacting the compound of formula (lli) with a reducing agent to give a compound of formula (I). 5
2. A process according to claim 1 wherein R1 is C1-C4 alkyi.
3. A process according to claim 2 wherein R‘ is ethyl.
4. A process ing to any one of ciaims 1 to 3, wherein the reaction of step 10 (i) is carried out in romethane.
5. A process according to any one of ciaims 1 to 4, wherein the acid conditions ~ in step (i) are provided by trifluoroacetic acid (TFA). 15
6. A process according to claim 5 wherein the TFA is present in an amount of a 2 moles of acid per mole of compound of formuia (ll).
7. A process according to any one of claims 1 to 6, n the reaction of step (i) is carried out at a temperature of about 0-5°C.
8. A process according to any one of ciaims 1 to 7, wherein the molar ratio of 2- quinoline yaidehyde to Compound of formula (ii) is about 1.1:1.
9. A process according to any one of ciaims 1 to 8 n step (ii) includes the 25 removal of impurities from the compound of formula (ill).
10. A s according to any one of claims 1 to 9 n, in step (ii), the compound of formula (lll) is obtained from its acid addition salt by neutralisation of the on mixture with a base.
11. A process according to claim 10 further comprising removing impurities by ' washing the reaction mixture with water or an aqueous solvent before and/or after neutralisation of the reaction mixture, 35
12. A process according to any one of claims 1 to 9 wherein step (ii) comprises removing the acid salt product of step (i) from the reaction e when the reaction of step (i) is substantially complete; and treating the isolated acid salt with a base to give the free alcohol of general a (ill). 5
13. A process according to any one of claims 10 to 12 wherein the base is s sodium or potassium hydroxide.
14. A process according to any one of the preceding claims wherein. in step (iii) the ion is carried out using triethyl silane.
15. A process according to any one of the preceding claims further including the additional step of: (iv) isolating and purifying the compound of a (l).
16. . A process according to any one of the preceding claims further including the additional step of: (v) converting the compound of formula (l) to (5-fluoremethyl~3-quinolin—2- ylmethyl—indol-1~yi)~acetic acid, the process comprising hydrolysing the compound of 20 formula (l).
17. A process according to claim 16, wherein the hydrolysis is base hydrolysis.
18. A process according to any one of the preceding claims, further comprising ' 25 before step (i), preparing a compound of formula (ll) by a process sing: reacting 5-fluoromethyl indole with a compound of the formula (W): X-CH2~COOR1 (N) where X is a leaving group, for example a halo group such as bromo and R1 is as defined for a (l).
19. A process according to claim 18 wherein the reaction takes place in the 35 presence of caesium carbonate in. acetonitrile.
20. A process according to claim 18 or claim 19 n the amount of solveni is about 10 volumes of t per gram of 5-fluoro-2—methyl indole. 5
21. A process according to any one of claims 18 lo 20 further comprising isolating and purifying the compound of formula (ll) before step (i).
22. An isolated and purified compound of formula (lll): 10 (lll) wherein R1 is Ci-Cs alkyl or benzyl.
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| GB201121557A GB201121557D0 (en) | 2011-12-15 | 2011-12-15 | Process |
| GB1121557.1 | 2011-12-15 | ||
| PCT/GB2012/000903 WO2013088108A1 (en) | 2011-12-15 | 2012-12-14 | Process for the preparation of (5-fluoro-2-methyl-3-quinolin-2-ylmethyl-indol-1-yl)-acetic acid esters |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| NZ626732A NZ626732A (en) | 2015-09-25 |
| NZ626732B2 true NZ626732B2 (en) | 2016-01-06 |
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