AU2007216781B2 - Compounds for the inhibition of histone deacetylase - Google Patents
Compounds for the inhibition of histone deacetylase Download PDFInfo
- Publication number
- AU2007216781B2 AU2007216781B2 AU2007216781A AU2007216781A AU2007216781B2 AU 2007216781 B2 AU2007216781 B2 AU 2007216781B2 AU 2007216781 A AU2007216781 A AU 2007216781A AU 2007216781 A AU2007216781 A AU 2007216781A AU 2007216781 B2 AU2007216781 B2 AU 2007216781B2
- Authority
- AU
- Australia
- Prior art keywords
- alkyl
- unsaturated
- alkenyl
- alkynyl
- compound
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Active
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D311/00—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only hetero atom, condensed with other rings
- C07D311/02—Heterocyclic compounds containing six-membered rings having one oxygen atom as the only hetero atom, condensed with other rings ortho- or peri-condensed with carbocyclic rings or ring systems
- C07D311/04—Benzo[b]pyrans, not hydrogenated in the carbocyclic ring
- C07D311/22—Benzo[b]pyrans, not hydrogenated in the carbocyclic ring with oxygen or sulfur atoms directly attached in position 4
- C07D311/26—Benzo[b]pyrans, not hydrogenated in the carbocyclic ring with oxygen or sulfur atoms directly attached in position 4 with aromatic rings attached in position 2 or 3
- C07D311/28—Benzo[b]pyrans, not hydrogenated in the carbocyclic ring with oxygen or sulfur atoms directly attached in position 4 with aromatic rings attached in position 2 or 3 with aromatic rings attached in position 2 only
- C07D311/32—2,3-Dihydro derivatives, e.g. flavanones
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D407/00—Heterocyclic compounds containing two or more hetero rings, at least one ring having oxygen atoms as the only ring hetero atoms, not provided for by group C07D405/00
- C07D407/02—Heterocyclic compounds containing two or more hetero rings, at least one ring having oxygen atoms as the only ring hetero atoms, not provided for by group C07D405/00 containing two hetero rings
- C07D407/04—Heterocyclic compounds containing two or more hetero rings, at least one ring having oxygen atoms as the only ring hetero atoms, not provided for by group C07D405/00 containing two hetero rings directly linked by a ring-member-to-ring-member bond
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
Landscapes
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
Abstract
COMPOUNDS FOR THE INHIBITION OF HISTONE DEACETYLASE Abstract (0083] The invention relates to a compound represented by the following formula 5 (1): s ((): Rs R1 and pharmaceutically acceptable salts, stereoisomers, enantioners, prodrugs and solvates thereof. The compounds are useful as an agent for enhancing the neurite outgrowth and preventing or treating of diseases associated with HDAC in particular, tumor or cell 10 proliferative diseases. In particular, the compounds of the invention can be used as an agent for anti-neurodegenerative diseases and human spinal muscular atrophy (SMA).
Description
S&F Ref: 826338 AUSTRALIA PATENTS ACT 1990 COMPLETE SPECIFICATION FOR A STANDARD PATENT Name and Address Naturewise Biotech & Medicals Corporation, of 3F, 216 of Applicant : Wenlin North Road, Peitou, Taipei, 112, Taiwan Actual Inventor(s): Chung-Yang Huang, Chia-Nan Chen, Wei-Jan Huang, Chih-Hsiang Huang, Li-Ling Chi, Chiou-Ping You Address for Service: Spruson & Ferguson St Martins Tower Level 35 31 Market Street Sydney NSW 2000 (CCN 3710000177) Invention Title: Compounds for the inhibition of histone deacetylase The following statement is a full description of this invention, including the best method of performing it known to me/us: 5845c(949352_ I) COMPOUNDS FOR THE INHIBITION OF HISTONE DEACETYLASE Field of the Invention [0001] The present invention relates to novel compounds which are useful as the agents for prevention or treatment of diseases associated with histone deacetylase (HDAC), in particular, tumor or cell proliferative diseases. They also can be used as the agents for enhancing the neurite outgrowth. In particular, the compounds of the 10 invention can be used as agents for anti-neurodegenerative diseases and human spinal muscular atrophy (SMA). Background of the Invention [0002] Eukaryotic DNA is highly organized and packaged in the nucleus. The organization and packaging are achieved through the addition of proteins, including core 15 histones -12A, 1-1213, 1-13 and 1-14, which form a complex structure, the chromatin, together with DNA. The modification of core histones is of fundamental importance to conforimational changes of the chromatin. The level of acetylation is related to transcription activity, and then the acetylation induces an open chromatin conformation that allows the transcription machinery access to promoters. Histone deacetylase 20 (HDAC) and histone acetyltransferase (H AT) are enzymes that influence transcription by selectively deacetylating or acetylating the c-amino groups of lysine located near the amino termini of core histone proteins. HDAC is a family of I I enzymes (isoforms) that may act as master regulators of many diseases, including cancer, because they are ~1~involved in the control of gene expression. Disruption of HDACs has been linked to a wide variety of human cancers. HIDAC enzymes or isoforms appear to be involved in many different types of cancer. [0003] Histone deacetylase (HDAC) inhibitors are emerging as an exciting new 5 class of potential anticancer agents for the treatment of solid and hematological malignancies. In recent years, an increasing number of structurally diverse HDAC inhibitors have been identified; they inhibit proliferation and induce differentiation and/or apoptosis of tumor cells in culture and in animal models. HDAC inhibition causes acetylated nuclear histones to accumulate in both tumor and normal tissues, providing a 10 surrogate marker for the biological activity of HDAC inhibitors in vivo. The effects of HDAC inhibitors on gene expression are highly selective, leading to transcriptional activation of certain genes such as the cyclin-dependent kinase inhibitor p2I WAFI/CIPI but repression of others. HDAC inhibition not only results in acetylation of histones but also transcription factors such as p53, GATA-1 and estrogen receptor-alpha. The 15 functional significance of acetylation of non-histone proteins and the precise mechanisms whereby HDAC inhibitors induce. tumor cell growth arrest, differentiation and/or apoptosis are currently the focus -of intensive research. HDAC inhibitors currently in clinical trials have shown activity and represent a class of molecularly targeted anti tumour agents with potential for efficacy based on a novel mechanism of action. 20 [0004] A review article published in Medicinal Research Reviews, Vol. 26, No. 4, pp. 397-413, 2006 stated that four classes of HDAC inhibitors, short-chain fatty acids, hydroxamic acids, benzamides and cyclic peptides, have been reported. Hydroxamic -2acid-based hybrid polar compounds (HPCs) are HDAC inhibitors, which induce differentiation at micromolar or lower concentrations (Journal of the National Cancer Institute, Vol. 92, No. 15, August 2, 2000, pp. 1210-1216). U.S. Pat. No. 6,174,905, EP 0847992, JP 258863/96, and Japanese Application No. 10138957 disclose benzamide 5 derivatives that induce cell differentiation and inhibit HDAC. WO 01/38322 discloses additional compounds that serve as HDAC inhibitors. It was reported in Hum Genet, 2006, 120, pp. 101-110 that the benzamide M344 up-regulates SMN2 protein expression in fibroblast cells derived from SMA patients up to 7-fold after 64 hours of treatment. It was reported that sodium butyrate ameliorates phenotypic expression in a transgenic io mouse model of spinal and bulbar-muscular atrophy (Human Molecular Genetics, 2004, Vol. 13, No. 11, pp. 1183-1192). Trichostatin A, a histone deacetylase inhibitor, was found to induce ubiquitin-dependent cyclin Dl degradation in MCF-7 breast cancer cells (Molecular Cancer 2006, 5:8; this article is available from: http://www.molecular cancer.comIcontent/5/l/8). U.S. Pat. No. 7,169,801 disclosed compounds that may be is used to inhibit histone deacetylase having the formula Z-Q-L-M or Z-L-M. US Patent Number 6888027 covers a family of Sulphonamide HDAC inhibitors including PXD10 1. European Patent Number EP 1 301 184 covers the use of valproic acid and derivatives as HDAC inhibitors in the treatment of solid tumors. [0005] However, there is t-ill- a need to develop a new class of HDAC inhibitors to 20 prevent or treat cancers. Summary of the Invention -3- -4 [0001] The object of the invention is to provide a group of compounds represented by the following formula (I): 2
R
5 R1 R3 0
R
4 R7 and pharmaceutically acceptable salts, stereoisomers, enantiomers, prodrugs and solvates thereof. The compounds are useful as an agent for enhancing the neurite outgrowth and preventing or treating diseases associated with HDAC in particular, tumor or cell proliferative diseases. In particular, the compounds of the invention can be used as agents for anti neurodegenerative diseases and human spinal muscular atrophy (SMA). One embodiment of the invention provides a compound represented by the following formula (I): 2
R
5 Ri R3 0
R
4 R7 wherein R, and R2 are each independently, 0-alkyl, S-alkyl, NH-alkyl, 0-alkenyl, S-alkenyl, NH alkenyl, 0-alkynyl, S-alkynyl, NH-alkynyl, O-C 3 -scycloalkyl, S-C 3 -scycloalkyl, NH-C 3 8cycloalkyl, 0-unsaturated 5- to 10-membered monocyclic or bicyclic ring, O-benzyl, S unsaturated 5- to 10-membered monocyclic or bicyclic ring, NH- unsaturated 5- to 10 membered monocyclic or bicyclic ring, alkyl, alkylenyl, alkynyl, C 3 -scycloalkyl, an -4a unsaturated 5- to 10-membered monocyclic or bicyclic ring or a saturated or unsaturated 5- to 1 0-membered heterocyclic ring comprising at least one ring heteroatom selected from the group consisting of: N, 0 and S; or R, and R 2 can together form dioxolane;
R
3 is O-alkyl, S-alkyl, NH-alkyl, 0-alkenyl, S-alkenyl, NH-alkenyl, 0-alkynyl, S-alkynyl, NH alkynyl, O-C3-scycloalkyl, S-C 3 -scycloalkyl, NH-C 3 -scycloalkyl, 0-unsaturated 5- to 10 membered monocyclic or bicyclic ring, 0-benzyl, S- unsaturated 5- to 10-membered monocyclic or bicyclic ring, NH- unsaturated 5- to 10-membered monocyclic or bicyclic ring, alkyl, alkylenyl, alkynyl, C3-scycloalkyl, an unsaturated 5- to 10-membered monocyclic or bicyclic ring or a saturated or unsaturated 5- to 10-membered heterocyclic ring comprising at least one ring heteroatom selected from the group consisting of: N, 0 and S;
R
4 is OH, OC(=O)alkyl, 0-alkyl, S-alkyl, NH-alkyl, 0-alkenyl, S-alkenyl, NH-alkenyl, 0 alcynyl, S-alkynyl, NH-alkynyl, O-C3-scycloalkyl, S-C3-scycloalkyl, NH-C 3 -scycloalkyl, 0 unsaturated 5- to 10-membered monocyclic or bicyclic ring, O-benzyl, S- unsaturated 5- to 10 membered monocyclic or bicyclic ring, NH- unsaturated 5- to 10-membered monocyclic or bicyclic ring, alkyl, alkylenyl, alkynyl, C3-gcycloalkyl, an unsaturated 5- to 10-membered monocyclic or bicyclic ring or a saturated or unsaturated 5- to 10-membered heterocyclic ring comprising at least one ring heteroatom selected from the group consisting of: N, 0 and S;
R
5 is C 4
-
1 6 alkyl or C 4 -I6alkenyl unsubstituted or substituted with one or more C 1 .6 alkyl, OH, halogen, CN, NO, N 3 , NH 2 , CHO, OR 9 , SR 9 ,' NR 9
COOR
9 , H O HO O O iuH
;R
6 is C 2
.
12 ailkyl or C 2
.
1 2 alkenyl unsubstituted or substituted with one or more C1.6alkcyl, OH, -4b 0 HO halogen, CN, NO, N 3 , NH 2 , CHO, OR 9 , SR 9 , NR 9 , or HOs 0 H
R
7 is hydrogen, halogen, OH, NH 2 , COOH, CHO, CN, NO, =0 or R 7 and R 8 may together form a double bond, a C 3 .6cycloalkyl, or a 5- to 10-membered heterocyclic ring comprising at least a heteroatom selected from the group consisting of N, 0 and S;
R
8 is hydrogen, halogen, OH, NH 2 , COOH, CHO, CN or NO;
R
9 is phenyl, C(=0)R 0 or C(=O)OR' 0 ; and R1 0 is OH, NHOH or NH 2 ; wherein both R5 and R 6 are not simultaneously unsubstituted alkyl or alkenyl; or pharmaceutically acceptable salts, stereoisomers, enantiomers, prodrugs or solvates thereof. Brief Description of the Drawings [0002] Fig. 1 shows the microscopic photographs of the rat glioma C6 cells treated with different concentrations of NBM-HD-1. [0003] Fig. 2 shows the DNA contents of the rat glioma C6 cells analyzed by FACScan Cytometry. [0004] Fig. 3 shows the electrophoresis plot of the genes of cell cycle of the rat glioma C6 cells treated with different doses of NBM-HD-1. [0005] Fig. 4 shows the immuno-fluorescent staining photographs and RT-PCR data of the rat glioma C6 cells treated with NBM-HD-1.
[0011] Fig. 5 shows Western Blotting plot of the rat glioma C6 cells treated with NBM-HD-I and sodium butyrate. [0012] Fig. 6 shows the relative inhibited activity of the HDAC on the rat glioma C6 cells treated with NBM-HD-,Iapd sodium butyrate. 5 [0013] Fig. 7 shows the microscopic photographs of the human giloblastoma DBTRG-05MG cancer cells treated with different doses of NBM-HD-1. [0014] Fig. 8 shows the microscopic photographs of the human breast MCF-7 cancer cells treated with different doses of NBM-HD- 1. [0015] Fig. 9 shows that NBM-HD-l markedly inhibited the MCF-7 cell growth 10 via modulation of the cell cycle arrested on the GO/G l phase in a dose-dependent manner. [0016] Fig. 10 shows that NBM-HD-l markedly increased the p2l\VAFI/CIPI gene expression in a dose-dependent manner. [0017] Fig. 1 1 shows Western Blotting plot of the MCF-7 cell treated with NBM HD-l. 15 [0018] Fig. 12 shows the photographs of the neurite outgrowth of the cortical neurons treated with NBM-HD- 1. [0019] Fig. 13 shows the microscopic photographs of the human breast cancer MCF-7 cells treated with different concentrations of NBM-HD-2. [0020] Fig. 14 shows the microscopic photographs of the human breast cancer 20 MCF-7 cells treated with different concentrations of NBM-HD-3. ~5~- Detailed Description of the Invention [0021] The present invention relates to novel compounds derived from propolins, which are useful as agents for enhancing the neurite outgrowth and preventing and treating of diseases associated with HDAC, in particular, tumor or cell proliferative 5 diseases. The compounds of the invention are potent in inhibiting growth in cancer cells via differentiation pathway. In particular, they can be used as agents for anti neurodegenerative diseases and human spinal muscular atrophy (SMA). Compounds of the Invention [0022] Accordingly, the present invention relates to compounds represented by the 10 following formula (1): R2 R5 R I R3 O R6, R4 R7 wherein R, and R 2 are each independently OH, OC(=O)alkyl, 0-alkyl, S-alkyl, N-alkyl, 0-alkenyl, S-alkenyl, N-alkenyl, 0-alkynyl, S-alkynyl, N-alkynyl, O-C 3 -Scycloalkyl, S-C 3 i 8 cycloalkyl, N-C 3
-
8 cycloalkyl, 0-unsaturated 5- to 10-membered monocyclic or bicyclic ring, S- unsaturated 5- to 10-membered monocyclic or bicyclic ring, N- unsaturated 5- to 10-mernbered monocyclic or bicyclic ring, alkyl, alkylenyl, alkynyl, C 3
-
8 cycloalkyl, an unsaturated 5- to 10-membered monocyclic or bicyclic ring or a saturated or unsaturated -6~ 5- to 10-membered heterocyclic ring comprising at least one ring heteroatom selected from the group consisting of: N, 0 and S; or R, and R 2 can together form dioxolane;
R
3 and R 4 are each independently OH, OC(=O)alkyl, O-alkyl, S-alkyl, N-alkyl, 0-alkenyl, 5 S-alkenyl, N-alkenyl, O-alkynyl, S-alkynyl, N-alkynyl, O-C 3
-
8 cycloalkyl, S-C 3 8 cycloalkyl, N-C 3
-
8 cycloalkyl, 0-unsaturated 5- to 10-membered monocyclic or bicyclic ring, S- unsaturated 5- to 10-me mbefellmonocyclic or bicyclic ring, N- unsaturated 5- to 10-membered monocyclic or bicyclic ring, alkyl, alkylenyl, alkynyl, C 3
-
8 cycloalkyl, an unsaturated 5- to 10-membered monocyclic or bicyclic ring or a saturated or unsaturated 10 5- to 10-membered heterocyclic ring comprising at least one ring heteroatom selected from the group consisting of: N, 0 and S;
R
5 is C 4 -1 alkyl or C 4 16 alkenyl wherein the alkyl or alkenyl is unsubstituted or substituted with one or more C- 6 alkyl, OH, halogen, CN, NO, N 3 , NH 2 , CHO, OR 9 , SR 9 ,
NR
9 , or COOR 9 ; 15 R 6 is C 2 1 2 alkyl or C 2
.
12 alkenyl wherein the alkyl or alkenyl is unsubstituted or substituted with one or more C 1 6 l.kMOH, halogen, CN, NO, N 3 , NH 2 , CHO, OR 9 , SR 9 , or NR 9 ; or one of R 5 and R 6 is hydrogen, halogen or OH, while the other is C 4
.
16 alkyl or C4. 6 alkylene unsubstituted or substituted with one or more C 1 6 alkyl, OH, NH 2 , halogen, CN, 20 NO or N 3 ;
R
7 and R 8 are each independently hydrogen, halogen, OH, NH 2 , COOH, CHO, CN, NO,
C
1 6 alkyl unsubstituted or substituted with OH, NH 2 , COOH, halogen, CN, NO or CHO, -7- =0, 0-alkyl, S-alkyl, N-alkyl, 0-alkenyl, S-alkenyl, N-alkenyl, O-alkynyl, S-alkynyl or N-alkynyl, or R 7 and R 8 may together form a double bond, a C 3
.
6 cycloalkyl, or a 5- to 10 membered heterocyclic ring comprising at least a heteroatom selected from the group consisting of N, 0 and S; s R 9 is phenyl, C(=O)R'", C(=0)OR 0 or benzyl; and R'" is OH, NHOI, NH 2 , C 1
-
6 alkyl, phenyl or benzyl; provided that when R , R 2 , R 3 and R 4 are OH, Rs is not H 3 C H3C and R 6 is not or H; or when RI, R 2 , R 3 and R 4 are OH and R 5 is H, R 6 is 1-13 [13 [13 _ZH not H 3 C or H 3 C 10 and pharmaceutically acceptable salts, stereoisorners, enantiomers, prodrugs and solvates thereof. [0023] In the context of the present specification, the term "alkyl" means straight or branched hydrocarbon chains. The alkyl is preferably CI.
10 alkyl. Preferably, the carbon number of alkyl is selected from the group consisting of 1 to 8; more preferably, it is is C1- 6 alkyl or C1.
4 alkyl. Examples of alkyl groups include methyl (-CH 3 ), ethyl (
CH
2 C1 3 ), propyl (-CH 2
CH
2
CH
3 ), isopropyl (CH 3
)
2 CH and butyl (-C 4
H
9 ). [0024] In the context of the present specification, the term "alkenyl" means both straight and branched chain unsaturated hydrocarbon groups, wherein the unsaturation is -8present only as double bonds. According to the invention, the alkenyl includes one or more double bonds. The alkenyl is preferably C 2 r 16 alkenyl. More preferably, the carbon number of alkenyl is selected from the group consisting of 2 to 12. Examples of alkenyl groups include ethenyl (-CH=C1 2 ), propenyl (-CH=CHCH 3 or -CH 2
CH=CH
2 ), butenyl ( 5 CH 2
CH=CHCH
3 or -C-I=CHCH 2
CH
3 or -CH 2
CH
2
CH=CH
2 ), -CH 2
CH=C(CH
3
)CH
3 , CH-CH=CH-Cl- 2 -Cl 2
-CH=CH-CH
3 and -CI-1 2
-CH=C(CH
3
)-CH
2
-CH
2
-CH=C(CH
3
)
CH3-. [0025] In the context of the present specification, the term "alkynyl" means both straight and branched chain unsaturated hydrocarbon groups, wherein the unsaturation is 0 present only as triple bonds. Preferably, the carbon number of alkynyl is selected from the group consisting of 2 to 8. More preferably, alkynyl is C2-6 alkynyl or C2-4 alkynal. Examples of alkynyl groups include propynyl (e.g., -CH 2 C z CH). [0026] In the context of the present specification, the term "cycloalkyl" means an aliphatic ring (saturated carbocyclic ring). Preferably, the carbon number of cycloalkyl is is selected from the group consisting of 3 to 8. Examples of cycloalkyl groups include cyclopropyl, cyclobutyl, cyclopentyl and cyclohexyl. [0027] In the context of the present specification, the term "unsaturated 5- to 10 membered monocyclic or bicyclic ring" means unsaturated 5- to 10-membered monocyclic or bicyclic (fused or otherwise) ring system, examples of which include 20 phenyl and naphthyl. [0028] In the context of "'the present specification, the term "saturated or unsaturated 5- to 10-membered heterocyclic ring comprising at least one ring heteroatom -9selected from the group consisting of: N, 0 and S" means a saturated or unsaturated 5- to 10-nembered heterocyclic ring system comprising at least one ring heteroatom selected from nitrogen, oxygen and sulphur, each group being optionally substituted by at least one substituent selected from nitro, hydroxyl, oxo, halogen, carboxyl, C 1
-C
6 alkyl, C 1 s C 6 alkoxy, C 1
-C
6 alkylthio, C 1 Calkylcarbonyl, C-C 6 alkoxycarbonyl and phenyl. Examples of the hetercyclic ring includes pyridinyl, pyrazinyl, pyrimidinyl, pyrroyl, pyrazolyl, imidazolyl, thiazolyl, oxazolyl, isoxazolyl, thiadiazolyl, oxadiazolyl, thienyl, furanyl, quinolinyl, isoquinolinyl, and the like. [0029] In the context of the present specification, the term "halogen" means 10 fluorine, chlorine, bromine and iodine. [0030) In the context of the present specification, the term "pharmaceutically acceptable salt" includes those formed with both organic and inorganic acids and bases. Pharmaceutically acceptable acidlddition salts include those formed from mineral acids such as: hydrochloric, hydrobromic, sulphuric, and phosphoric, acid; and organic acids is such as: citric, tartaric, lactic, pyruvic, acetic, trifluoroacetic, succinic, oxalic, formic, fumaric, maleic, oxaloacetic, methanesulphonic, ethanesulphonic, p-toluenesulphonic, benzenesulphonic and isethionic acids. Pharmaceutically acceptable base salts include ammonium salts, alkali metal salts such as those of sodium and potassium, alkaline earth metal salts such as those of calcium and magnesium and salts with organic bases, 20 including salts of primary, secondary and tertiary amines. -10- [0031] In the context of the. present specification, the term "prodrug" means a compound which is converted Within the body, e.g., by hydrolysis in the blood, into its active form that has medical effects. (0032] In the context of the present specification, the term "solvate" means a 5 complex comprising the compound of the invention and a solvent in which they are reacted or from which they are precipitated or crystallized. [0033] In the context of the present specification, the term "stereoisomers" are isomeric molecules whose atomic connectivity is the same but whose atomic arrangement in space is different. 10 [0034] In the context of the present specification, the term "enantiomers" are stereoisomers that are nonsuperithyosable complete mirror images of each other, much as one's left and right hands are "the same" but opposite. [0035] According to one embodiment of the compounds of formula (I) of the invention, preferably, R, and R 2 are each independently OH, OCI 6 alkyl, OC(=O)C. 15 6 alkyl, 0-phenyl or O-benzyl or R, and R 2 together form dioxalene. More preferably, R, and R 2 are each independently OH, OCH 3 , OCH 2
CH
3 , OCH 2
CH
2
CH
3 , OC(=0)CH 3 , 0 phenyl or O-benzyl. [0036] According to one embodiment of the compounds of fonnula (I) of the invention, preferably, R 3 and R 4 are.each independently 01-I, OCI 6 alkyl, OC(=O)C,. 20 6 alkyl, 0-phenyl or O-benzyl. Mbre preferably, R 3 and R 4 are each independently OH,
OCH
3 , OCH 2
CH
3 , OCH 2
CH
2
CH
3 , OC(=O)CH 3 , 0-phenyl or O-benzyl. ~11~- [0037] According to one embodiment of the compounds of formula (1) of the
H
3 H, invention, preferably, R 5 is H3 C HO BrJ 3H
H
3 C H 3 C
CI.
4 alkyl pheny
CI.
4 alkyl O 0 5 phenyl O 0 0 HO O HO or HON O [0038] According to one embodiment of the compounds of formula (I) of the HO N 3 10 invention, preferably, R 6 is H 3 C H 3 C 3 ~1 32~ Br - H 3 OH HH 3 C - 4 aI yl 0
H
3 C PhS cl- 3 0 P hhCeCya lyl0 Phenyl O Ci 4 alkylO phenylO 0 0 HO HOJ O, or HO0 5 [0039] According to the invIntidn, the preferred compound of formula (I) of the invention is selected from the group consisting of:
CH
3
CH
3
OCH
3 HO
H
3 C OCH 3
H
3 CO O
H
3 C HO
CH
3
OCH
3 0 10 -13-
H
3
H
3 Ac
H
3 C O~e AeG 0
H
3 C ~ Cl- 3 OHc 0 _ H3H 3 Bn
H
3 C I~
H
3 C Cl1I 3 OHn 0
H
3 H-3 Mc O~n
H
3 C MeG 00 W O. lH 3 C
N
3 _
CH
3 OOeG -14-
HNH
3
H
3 Me H3C OMe MeO 0, 1- 3 C
H
2 N
CH
3 OMe 0 Br H 3 1-1 3 Me
H
3 C
-
me
H
3 C Br Cl-1 3 OMe 0
CIH
3
H
3 Me OMe
H
3 C M-uo I-1 3 C Cl:
CH
3 OMe 0.
H
3 1-13 Me
H
3 C MeG" 0 * PhS
CH
3 OMe 0 -15- Me OMe HO OMe NJ0 0~ MOMe HO O~e O HO 0 m O OMe MeO O OMe 0 0 O1Me HOJ", OMe MeO O HO0 O OMe O O ~16~ N OMe H MeO O H If141 0 OMeO0 0 Ol HO H OH 0 OH 0 ~17~-
CH
3
CH
3
OCH
3 H3C IOCH 3
H
3 CO 0
H
3 C
CH
3 OH 0
CH
3
CH
3
OCH
3 HO>J
OCH
3
H
3 C 3 ,0
H
3 C HO K
CH
3 OH 0
CH
3
CH
3
OCH
3
H
3 C L. OCH 3
H
3 C" HO
CH
3 OH 0 and -18-
CH
3
CH
3
OCH
3
H
3 C K 1 H3CO
CH
3 OH O [0040) The present invention also relates to a stereoisomer according to the compound of formula (I), and is represented by the following formula (II): 2 R5__ R1 R3 O R6 R
R
4 R 7 wherein RI, R2, R3, R4, R5, R6, R7 and Rs are defined as those in formula (I). [0041] According to a more preferred embodiment of the invention, the compound of formula (1) is that having the following formula (IlI), (IV), (V) or (VI): -19-
CH-
3
CH
3
OCH
3 HO
H
3 C OCH 3 HC
H
3 CO 0 H C HO:>
CH
3
OCH
3 0(I)
CH
3
CH
3
OCH
3 HO<
OCH
3
H
3 CO ~ 0
CH
3 OH 0 (V) CH3 CH-20--
CH
3
CH
3
OCH
3 HO OCH 3
H
3 CO 0 5 H 3 C
HO
CH
3 OH 0 (VI) [0042] According to the invention, the compounds of formula (1) of the invention can inhibit HDAC and thus can be used as agents for prevention or treatment of diseases io associated with histone deacetylase (HDAC). In addition, the compounds of the invention significantly inhibit growth of multiple cancer cell lines, including those of rat C6 glioma, human glioblastoma, human breast cancer cells, human leukemia cells, and human melanoma cells. The mechanism for inhibiting the growth of cancer cells may be via differentiation pathway, in particular via induced differentiation and regulated cell 15 cycle regulator gene expression, including those of p21 and cyclin B. In addition, the compounds of formula (1) of the invention can mediate neuronal differentiation of neural stem cells and thus can be used as agents against anti-neurodegenerative diseases. [0043] For the therapeutic uses of the compounds of the invention, the dosage administered will, of course, vary with the compound employed, the mode of 20 administration, the treatment desired and the disorder indicated. The daily dosage of the compound of formula (I) may be in the range from 1 mg/kg to 40 mg/kg. The invention provides the methods of inhibiting HDAC, treating tumor or cell proliferative disease, -21neurodegenerative diseases and hun5 spinal muscular atrophy and enhancing the neurite outgrowth in a subject, comprising administrating to the subject a therapeutically effective amount of the compounds of the invention, respectively. General Synthesis of the Compounds of Formula I of the Invention 5 [0044] The compounds of the present invention can be prepared by any conventional means. Suitable processes for synthesizing these compounds are provided in the examples. Generally, compounds of formula I can be prepared according to one of the described synthetic schemes below: -22- Scheme 1 CH3 CH 3 OH CH 3
CH
3 OMe 0 3 NOH H3- -OMe H3C 0 K 2
CO
3 , DMS H3C 0O e
H
3 C ~ acetone, r H 3 C
OH
3 OH 0 OH 3 OMe 0 1 2
CH
3
CH
3 OH CH 3
CH
3 OAc
H
3 C 'OH H 3 C OAc HO Ac 2 0, pyr AcO HC r. H 3 0 C
CH
3 OH 0 CH 3 OAc 0 1 3 9.
OC OH 3 OH OH 3 , H 3 OMe N. .
O
H
3 ON N OMe 0MeO 0 ~N _T HO N. 0 N.K 2 005, M el N.C H3C acetone, rt
OH
3 OH 0
CH
3 OH 0 4 -23- Scheme 2
CH
3
C;H
3 OH CH, CH, H, - I 0H H,- OB11
H
3 C acetoiie 1 5
CH
3 CF], ORH, OR -,11 OR, HOCH CH OR R, O ._ H 2 S0 4 TFP 0 N CI ORI I-1 HO CH OR, I R:=R2 H 6a R,7R,=H 2 R,=R 2 =.lu 6b R=RH 2 =Klo 3 R,-R 2 ?-Ac 6c RRA 4 R,-Me.R2=H- 6d R, =Moi., R~H 5 R.=R2=Bi 6e RI=R2 81 Plil(OAc)., KeCN CH, OHR, Cl) 3 CH,. OR, N N~ Or, HO (-.OR,
H
3
H
2 S0- 4 -THF H 0 N (-H3 OR,
CH
3 OP, C) 1 H.=R. =H 7a R,2R 2 =H 2~ R,=R2=Me 7b Rj=R2=Me 3 R,rRF4?Ac 7c RI=R,-.Ac 4 R,=Me. R2=H 7d R,=Me, R2=H 5 RI=R 2 =Bt3 7e R,=R 2 =l) -24- Scheme 3 Ci, CH-, OR 1 CH, CHi OR,
H
3 (2 113C 0,0 N N <'N MeCH R, N TSOH.C311CI2
H
3 1)2 0 H; OR, OH I R,zR2H 8a R,tR 2 rH 2 Rz=R 2 =M"e 8b RIzR 2 zMe 3 RZ,=R 2 =Ac Sc R,=R 2 =Ac 4 R.=MeC R = H 8d R.=Me R-.=H 5 I):028i1 Se R-=R 2 =Fln CH, OH, OR, N N OR, HO Cli) ORI NO: NO !>N H;0.HF A C: OR, HO~f
OH
3
C"
3 oR2 Sa R,=R 2 =H Sb R,=0 2 =Me i0a R,zR 2 zH Sc R,zR,zAc l0b R,=R 2 =Me Sd R,41e.' R2=l l0c RmR 2 =Ac Se RI=R2=03 10d RzMe. R 2 =H l~e R,=R-,=Bni McP!A 00)01 ? [3 CH R CH- CH1 OR0,C 3 1 OR NR A' ,OR N .>1 ) RNH 2 , CrI 2 CI1 2 HO A 2) H,0,-THF. 0 m OH A' R H 0113 OR 2 O; ORNO Ila R1R20 12a R,=R 3 'H lib ,=R2N~e12b R,=R.'Me lib R,:R 2 Oule 12c R,zR,:Ac lit R,=MR 2 C 124 R,4Nie. R~rH 114 R,=M.3. Pf 12e RrR,43,i -25- Scheme 4 HO C.I-I 0 2 1 3 Ohle CH, CH, CIMbE
H
3 C MOO C0 DEAD, Ph 3 P HiPC - OMe lH'C HN, e *~
CH
3 orke 0eU0 l0b 13 Cf' 3 (H, OMCe H,N N Ohle NaBH4. MeN ' rl H 3 C CH-, ole 0 14 HCI CH, OH 3 or'e 'N I-H , Oi N, OMe H,
H
3 C P~r 3 0
H
3 ). I 30 HO;: f> Cill nki 0 CH, Okle 0 10Ob 15 P1350, H-C)S 4 sOI.pyr
CH
2
CI
2 H 13 )e 00H3 CH 3 ONIe N - O~le NC W~e Me()0 0 0 C.H3 O~le 0H
CH
3 orle 0 16 1 -26- Scheme 5 HO OMeR0e OMe MeN, O e Oe MeO N0 .'N RCOCI, pyr 0 Meo 0 ." I H OD OMeO0r R 0)- OMe 0 10Ob 18a: R=0H 3 RI, NaHl1b:
R=CH
3
CH
2 RH 18c: RBn I ~18d:
R=(CH
3
)
2 CH Ro OMe No;! OO ~ e 19a: R=CH 3 19b: R=CH 3
CH
2 19c: RBn 19d: R=(CH 3
)
2 CH -7- Scheme 6 HO OMe 0 OMe O OMe OMe MeO O MeO 0 BrCH2CO2MeI HO OMe NaH, DMF /O O 0 6b 20 0OMe HO OMe NaOH, MeOHwal, MeO N NH 2 OH, EtOH, KOH Ho HOrO OMe 0 0 21 0 OMe HON N O OMe MeO 0 H HO'N O OMe O 0 22 ~2 8~ Scheme 7 OH O--\ OH 0N 0 K 2
CO
3 , RI HO ON ' O 'O ' ctn, HC(OMe) 3 , TsOH HO O Acetone, 0 MeOH, rt or Ac 2 0, pyr, rt OH 0 OH 0 1 23 R=Me, i-propyl, Bn, Bz O HO O- O OO RO 0 H 2 SO,-THF RO 0 BrCH 2
CO
2 Me HO INaH, DMF OR O OR 0 25a R=Me 24a R=Me 25b R=i-propyl 24b R=i-propyl 25c R=Bn 24c R=Bn 25d R=Bz 24d R=Bz 25e R=Ac 24e R=Ac O ~ O0 O O\ O O -O RO O NaOH, MeOH(aq H-'- RO O O OR O HO 0 OR O 26a R=Me 26b R=i-propyl 27a R=Me 26c R=Bn 27b R=i-propyl 26d R=Bz 27c R=Bn 26e R=Ac 27d R=Bz 27e R=Ac HO' NA'NO 0 H
NH
2 OH, EtOH, KOH RO 0 U I HO'N Y< OR 0 0 28a R=Me 28b R=i-propyl 28c R=Bn 28d R=Bz 28e R=Ac -29- Scheme 8 OH OMe OH OMe HO 0 "1 MeO N0
K
2 COt DMS - - acetone OH 0 OMe 0 30 29 OMe OMe MeO 0.' H2SOTHF HO 31 OH OH HO O OH 49%H2SOrTHF (4:6) HO O OH OHO OH O OH 32 33 OH OAc HO O OH Ac 2 O, pyr AcO 0 OAc rt. overnight OHO OAc O 32 34 OH OMe HO 0 CH K 2 C0 3 , DMS MeO O OMe H 0ip, overnight OH O 7OMeO O 32 35 [0045] Methylation of RI, R 2 , R 3 and R 4 of the compounds of formula (I) may be (lone by the following procedure: mixing the reactant, K 2
CO
3 and acetone with Me 2
SO
4 (DMS), and heating and stirring the solution; refluxing the resulting solution under a -30controlled atmosphere (for example, under N 2 ) for a period; after removing the organic solvent, dissolving the residue in a certain organic solution and washing it with water; drying the organic layer by evaporation under reduced pressure and purifying the product by a silica gel column (EtOAc: n-Hexane = 1:4). 5 [0046] The addition of OH. to a double bond in R 5 or R 6 may be done by the following procedure: adding the solution of reactant in THF to H 2
SO
4 in an ice bath; after the addition, stirring the solution for a period and then diluting it with water; extracting the mixture with a suitable organic solution, for example, CH 2 Cl 2 ; drying the combined organic layers by evaporation under reduced pressure to give a residue, and purifying the 10 residue by a silica gel column (0-3% MeOH/CH 2 Cl 2 ). [0047] The preparation of compounds 6a-e and 7a-e were shown as scheme 1 and 2 described. The Propolin G, that is a propolin derivative known in the art, was methylated, acetylated, rigio-selectively methylated and benzylated with the corresponding reaction conditions to yield compounds 2-5 and followed by acidic 15 hydration of compounds 1-5 provided target dihydroflavones 6a-e, respectively. lodosobenzene diacetate oxidation followed by acidic hydration of compounds 1-5 afforded the corresponding flavones 7abe. [0048] Compounds 10a-e and 12a-e were prepared as outlined in scheme 3. Sodium borohydride reduction followed by dehydration of compounds 1-5 gave the 20 corresponding compounds 9a-e. Acidic hydration of 9a-e yielded target compounds 10a e, respectively. MCPBA epoxidation of compounds 9a-e provided the epoxides Ila-e, ~31~ and the ensuing nucleophilic reaction with corresponding amines such as methylamine, ethylamine and enzylamine afforded target compounds 12a-e, respectively. [0049] Compounds 14-17 were synthesized as scheme 4 described. Mitsunobu reaction of 10b gave desired azide 13 and the ensuing sodium reaction converted azide to 5 tertiary amine 14. Bromination with phorsphorus tribromide, thiolation with phenol thiol (PhSH) and chloination with thionyl chloride of compound 10b provided bromide 15, thiol ether 17 and chloride 16, respectively. [0050] Compounds 18a-d and 19a-d were prepared as scheme 5 described. Acylation of compound 10b with corresponding acyl chlorides such as acetyl, propionyl, 10 benzoyl and isobutyryl gave compounds 18a-d, respectively. Alkylation of compound 10b with corresponding alkyl iodides such as methyl, ethyl, benzyl and isopropyl iodide afforded compounds 19a-d, respectively. [0051] Compound 22 was synthesized as scheme 6 showed. Reaction of tertiary alcohol of compound 6b with ethyl bromoacetate under sodium hydride condition gave 15 compound 20. Basic hydrolysis of compound 20 afforded compound 21 and following reaction with hydroxylamine yielded hydroxamic acid 22. [0052] Hydroxyamic acids 28a-e were prepared as scheme 7 described. Reaction of compound I with trimethyl orthoformate under acidic conditions gave acetonide 23 and the ensuing alkylation with alky iodides such as methyl, isopropyl and benzyl, or 20 acylation with benzoyl chloride 'and acetic anhydride afforded compounds 24a-e, respectively. Acidic hydration of two terminal olefins of compounds 24a-e provided compounds 25a-e and the ensuing reaction with ethyl bromoacetate gave compounds ~32~ 26a-e. Basic hydrolysis of compounds 26a-e afforded compounds 27a-e and the ensuing reaction with hydroxylamine yielded hydroxamic acids 28a-e, respectively. Pharmaceutical Composition of thfmit'inntion [0053] The compounds of formula (I) and pharmaceutically acceptable salts, s stereoisomers, enantiomers, prodrugs and solvates thereof may be used on their own but will generally be administered in the form of a pharmaceutical composition in which the formula (1) compound/salt/solvate (active ingredient) is in association with a pharmaceutically acceptable adjuvant, diluent or carrier. Depending on the mode of administration, the pharmaceutical composition will preferably comprise from 10 to 30 10 wt% (percent by weight), more preferably from 30 to 50 wt%, still more preferably from 50 to 70 wt%, and even more preferably from 70 to 100 wt%, of the active ingredient, all percentages by weight being based Ontotal composition. In addition, the pharmaceutical composition of the invention may further comprise other agents for prevention or treatment of diseases associated with histone deacetylase (HDAC). is [0054] The pharmaceutical compositions may be administered systemically, e.g., by oral administration in the form of tablets, capsules, syrups, powders or granules; or by parenteral administration in the form of solutions or suspensions; or by subcutaneous administration; or by rectal administration in the form of suppositories; or transdermally. [0055] The compounds and pharmaceutical compositions of the invention are an 20 HDAC inhibitor and can be retained long in the cells and continuously induce the acetylation of histone 14. They ar HDAC inhibitors inducing differentiation of cells and neural stem cells. In addition, the compounds of the invention significantly inhibits -33- HIDAC activity. The compounds of the invention significantly decrease both S and G2/M phases of the cells in a dose-dependent manner and change the morphology of cancer cells. Therefore, the compounds of the invention can treat tumor or cell proliferative disease. Moreover, the compounds of the invention can enhance the neurite outgrowth 5 and treat neurodegenerative diseases and human spinal muscular atrophy (SMA). EXAMPLE The following examples illustrate preferred methods for synthesizing and using the compounds: Example I Preparation of 3',4',5,7-Tetramethyl-propolin G (2) 10 [00561 To the mixture of Propolin G (1, 5 g, 10.16 mmol), K 2
CO
3 (16.27 g, 117.89 mmol) and acetone (280 mL) Me 2
SO
4 (15.76 mL, 126 mmol) was added and the resulting solution was heated to reflux under nitrogen for 24 h. After removal of the organic solvent, the residue was dissolved in CI-1 2 Cl 2 (80 mL) and washed with H20 (40 mL x 3). The CH-,Cl layers were dried over-NaS0 4 and evaporated under reduced pressure. The i.5 residue obtained was purified by a silica gel column (EtOAc: n-Hexane = 1:6) to give compound 2 (4.00 g, 72%): 'H-NMR (400 MHz, CDCl 3 ) 0 7.26 (11H, d, J=8.6 Hz), 6.86 (l H, d, J=8.6 Hz), 6.27 (111, s), 5.50 (1 H, dd, J=2.5, 13.5 Hz), 5.14-5.11 (1H, m), 5.11 5.10 (111, m), 5.02-4.99 (IH, m), 3.87 (31H, s), 3.83 (31, s), 3.79 (611, s), 3.50 (111, dd, J=6.6, 15.2 Hz), 3.43 (111, dd, J=5.8, 15.2 Hz), 3.00 (11-, dd, J=13.5, 16.7 H z) , 2.68 20 (11H, dd, J=2.6, 16.7 Hz), 2.00-1.92 (211, m), 1.75 (3H, s), 1.70 (3H, s), 1.65 (3H, s), 1.60 (311, s), 1.52 (311, s); "C-NMR (100 MHz, CDC 3 ) O1 189.4 (s), 164.0 (s), 163.3 (s), 159.6 (s), 153.0 (s), 147.2 (s), 135.6 (s), 134.2 (s), 131.5 (s), 131.3 (s), 129.8 (s), 124.1 -34- (d), 122.8 (d), 122.7 (d), 122.1 (d), 118.2 (s), 110.3 (d), 108.7 (s), 95.6 (d), 75.9 (d), 61.8 (q), 60.7 (q), 55.7 (q), 55.7 (q), 45.1 (t), 39.6 (t), 26.6 (t), 25.7 (q), 25.6 (q), 24.9 (t), 22.0 (t), 17.7 (q), 17.6 (q), 16.3 (q); HREIMS Calcd for C 34
H
4 4 0 6 (M) 548.3142, Found 548.3140. 5 Example 2 Preparation of 6-(2-Hydroxy-2-methylbutyl)-2'-(7-hydroxy-3,7 dimethyloct-2-enyl)-3',4',5,7-tetramethoxyflavanone (6b) [0057] To a solution of compound 2 (7 g, 12.77 mmol) in TI-F (170 mL) 49%
H
2
SO
4 (140 mL) was added in an ice bath. After complete addition, the reaction mixture 10 was stirred at rt for 8 h and then diluted with H 2 0. The reaction mixture was extracted with CH 2
CI
2 (100 mL x 3). The combined organic layers were dried over Na 2
SO
4 and evaporated under reduced pressure to give a residue, which was purified by a silica gel column (n-hexan:EtOAc=l:lVl:3) to give pure oil 6b (2.30 g, 34%). 'I-NMR (400 MlHz, CDCI 3 ) D 7.27 (111, d, J=8.6 Hz), 6.87 (1H, d, J=8.6 Hz), 6.28 (1H, d, J=2.6 15 H z), 5.49 (11, dd, J=2.4, 13.6 Hz), 5.05 (11H, t, J=6.0 Iz), 3.87 (3H, s), 3.84 (3H, s), 3.79 (6H, s), 3.52 (111, dd, J=5.5, 15.2 Hz), 3.43 (1H, dd, J=7.6, 15.2 Hz), 2.97 (111, dd, J=8.0, 16.7 Hz), 2.70-2.59 (3H, m), 1.93 92H, t, J=6.4 Hz), 1.65 (3H, s), 1.64-1.60 (211, m), 1.41-1.32 (4H, m), 1.25 (611, s), 1.15 (311, s), 1.14 (3H, s); 3 C-NMR (100 M Hz, CDCl 3 ) 189.4 (s), 164.0 (s), 163.3 (s), 159.6 (s), 153.0 (s), 147.2 (s), 135.6 (s), 20 134.2 (s), 131.5 (s), 131.3 (s), 129.8 (s), 124.1 (d), 122.8 (d), 122.7 (d), 122.1 (d), 118.2 (s), 110.3 (d), 108.7 (s), 95.6 (d), 75.9 (d), 61.8 (q), 60.7 (q), 55.7 (q), 55.7 (q), 45.1 (t), -35- 39.6 (t), 26.6 (t), 25.7 (q), 25.6 (q), 24.9 (t), 22.0 (t), 17.7 (q), 17.6 (q), 16.3 (q); IREIMS Caled for C 34 H4 8 0 8 (M) 584.3338, Found 584.3344. Example 3 Preparation of 6-Geranyl-3',4',5,7-tetramethoxyflavanone (30) 5 [0058] To the mixture 29 ( Propolin C, 128 mg, 0.31 mmol), K 2 C0 3 (431 mg, 3.1 mmol) and acetone (15 mL) was added Me 2
SO
4 (0.25 mL, 2.48 rnmol) and the resulting solution was heated to reflux under nitrogen for 24 h. After removal of the organic solvent, the residue was dissolved in CI-1 2 C1 2 (50 mL) and washed with H 2 0 (50 mL x 3). The organic layer was dried over Na 2
SO
4 and evaporated under reduced pressure. The io residue obtained was purified by a silica gel column (EtOAc: n-Hexane=l:4) to give compound 33 (107 mg, 72%). 'H-NMR (400 MHz, CDCl 3 ) 6.99-6.97 (211, in), 6.88 (11H, d, J=8.8 Hz), 6.31 (11H, s), 5.33 (111, dd, J=2.8, 13.3 Hz), 5.11 (11H, td, J=1, 6.9 liz), 5.04(111, td, J=1.3, 5.5 Hz), 3.90 (311, s, OMe), 3.88 (311, s, OMe), 3.81 (311, s, OMe), 3.80 (31H, s, OMe), 3.34 (1 H, dd, J=7.2, 14.1 Hz), 3.26 (111, dd, J=7.2, 14.1 Hz), is 3.02 (11H, dd, J=13.3, 16.7 liz), 2.74 (11H, dd, J=2.8, 16.7 Iz), 2.04-2.00 (211, m), 1.96 1.92 (2H, m), 1.74 (311, s), 1.62 (3H, s), 1.55 (3H, s); 3 C-NMR (100 MHz, CDCl 3 ) 189.1 (s), 164.1 (s), 163.0 (s), 159.4 (s), 149.5 (s), 149.4 (s), 131.3, 131.2 (s), 124.4 (d), 122.9 (d), 118.9 (d), 109.5 (d), 1089 9 :(s), 95.7 (d), 79.2 (q), 61.9 (q), 56.1 (q), 56.0 (q), 55.9 (q), 45.6 (t), 39.8 (t), 26.7 (t), 25.7 (s), 22.0 (t), 17.7 (q), 16.1 (q); HREIMS Calcd 20 for C 29
H
36 0 6 (M) 480.2510, Found 480.2511. -36- Example 4 Preparation of 6-(2,6-Dihydroxy-2,6-dimethyl-octyl)-3',4',5,7 tetramethoxyflavanone (31) [0059] To a solution of compound 30 (80 mg, 0.17 mrnol) in THF (6 mL) 49% H2S0 4 (4 nL) was added in an ice bath. After complete addition, the reaction mixture 5 was stirred at rt for 8 h and then diluted with 120. The reaction mixture was extracted with CH 2
C
2 (50 mL x 3). The combined organic layers were dried over Na 2
SO
4 and evaporated under reduced pressure to give a residue, which was purified by a silica gel column (0-3% MeOH/CH 2 Cl 2 ) to give pure oil 31 (44 mg, 50%). 'H-NMR (400 MHz, CDCl 3 ) 06.99-6.97 (211, m), 6.88 (1H, d, J=8.8 Iz), 6.31 (1H, s), 5.33 (1H, dd, J=2.8, 10 13.3 Hz), 3.90 (311, s, OMe), 3.88 (3H, s, OMe), 3.84 (311, s, OMe), 3.82 (3H, s, OMe), 3.02 (lIH, dd, J=13.3, 16 Hz), 2.5)(11, dd, J=2.8, 16Hz), 2.62-2.58 (211, m), 1.63-1.59 (711, m), 1.49-1.48 (2H, m), 1.23 (3H, s), 1.22 (311, s), 1.21 (311, s); 1 3 C-NMR (100 MHz, CDCI 3 ) 189.1 (s), 164.1 (s), 163.0 (s), 159.4 (s), 149.5 (s), 149.4 (s), 131.2 (s), 119.0 (d), 118.9 (d), 111.3 (d), 109.5 (d), 108.9 (s), 95.8 (d), 72.9 (s), 71.1 (s), 62.1 (q), i.5 56.0 (q), 55.9 (q), 45.5 (t), 44.5 (t), 42.3 (t), 42.1 (t), 41.5 (t), 29.4 (q), 29.3 (q), 26.9 (q), 26.8 (q), 18.8 (t), 17.5 (t); HREIMS Caled for (M-18) 498.2602, Found 498.2610. Example 5 Preparation of Porpolin A (33) [0060] To a solution of Propolin D (compound 32, 100 mg, 0.24 mmol) in THF (6 20 mL) 49% H 2
SO
4 (4 mL) was addthin an ice bath. After complete addition, the reaction mixture was stirred at rt for 8 h and then diluted with 120. The reaction mixture was extracted with C- 2 Cl 2 (50 mL x 3). The combined organic layers were dried over - 37 - Na 2
SO
4 and evaporated under reduced pressure to give a residue, which was purified by a silica gel column (0-3% MeOH/C- 2
C
2 ) to give pure oil 33 (42 mg, 40%). 'H-NMR (400 MHz, MeOD) 6.87 (11H, d,(J=8.4 Hz), 6.71 (111, d, J=8.4 liz), 5.88 (211, dd, J=1.9, 3.3 Hz), 5.47 (1 H, dd, J=2'6, 13 Hz), 5.12 (1 H, dd, J=5.7, 6.7 Hz), 3.47 (211, d, s J=6.6 liz), 3.10 (1H, dd, J=13.4,'17 H z) 2.60 (1H, dd, J=2.7, 17.1 H z), 1.94 (111, dd, J=6.6, 13.4 Iz), 1.64 (11, d, J=0.5 H z), 1.43-1.41 (2H, m), 1.37-1.34 (21-1, m), 1.13 (3H, s), 1.12 (3H, s); 3 C-NMR (100 MHz, CDCl 3 ) 198.2 (s), 168.5 (s), 168.4 (s), 165.5 (s), 165.4 (s), 165.2 (s), 146.5 (s), 144.5 (s), 135.8 (s), 129.7 (s), 128.2 (s), 124.7 (d), 118.7 (d), 113.6 (d), 103.2 (s), 97.1 (d), 96.2 (d),77.8 (d), 71.5 (s), 44.3 (t), 43.7 (t), 41.2 10 (t), 29.2 (q), 29.1 (q), 25.4 (t), 23.7 (t), 16.2 (t). Example 6 3',4',5,7-Tetraacetyl Propolin D (34) [0061] To a solution of Projplin D (compound 32, 124 mg, 0.29mmol) in pyridine (4 mL) acetic anhydride (2 mL) was added and the reaction mixture was stirred at room 15 temperature for 6 h. EtOAc (25 mL) was added to the reaction mixture and the mixture was washed with 0.1 N HCl (10 mL x3). The organic layer was dried over Na 2
SO
4 and evaporated under reduced pressure to give a residue. The residue was purified by a silica gel column (CH 2 Cl 2 ) to yield pure 34 oil (139mg, 80%). 'H-NMR (400 MHz, CDCl 3 ) 7.49 (111, d, J=8.6 iz), 7.18 (111, d, J=8.6 Iz), 6.72 (11-1, d, J=2.2 Hz), 6.53 (111, d, 20 J=2.2 Iz), 5.60 (11-, dd, 3=2.5, 13.8 Hz), 5.01 (1H, td, J=5.3, 4.6 Hz), 4.94 (IH, td, 3=1.0, 5.8 H1z), 3.35 (11-, dd, J=7A115,7 H1z), 3.26 (1H, dd, J=5.3, 15.5 Hz) , 2.98 (11H, dd, J=13.8, 16.8 Hz), 2.36 (3H,s), 2,27 (61, s), 2.26 (s, 311), 2.02-1.91 (511, m), 1.64 -38-~ (311, s), 1.62 (31H, s), 1.55 (311, s); 3 C-NMR (100 MNz, CDCl 3 ). 188.8 (s), 169.2 (s), 168.1 (s), 168.0 (s), 167.9 (s), 163.2 (s), 155.9 (s), 151.3 (s), 142.8 (s), 140.9 (s), 137.0 (s), 135.2 (s), 133.5 (s), 131.6 (s), 124.5 (d), 123.9 (d), 121.6 (d), 120.7 (d), 111.6 (s), 110.7 (d), 109.0 (d), 76.1 (d), 44.8 (t), 39.4 (t), 26.5 (t), 25.6 (t), 25.5 (q), 21.1 (q), 21.0 5 (q), 20.7 (q), 20.3 (q),17.7 (q), 16.(g),. Example 7 3',4',5,7-Tetramethyl propolin D (35) [0062] To the mixture 32 (128 mg, 0.31 mmol), K 2
CO
3 (431 mg, 3.1 mmol) and acetone (15 mL) Me 2
SO
4 (0.25 mL, 2.48 mmol) was added and the resulting solution was 10 heated to reflux under nitrogen for 24 h. After removal of the organic solvent, the residue was dissolved in C-1,Cl 2 (50 mL) and washed with H20 (50 mL x 3). The organic layer was dried over Na 2
SO
4 and evaporated under reduced pressure. The residue obtained was purified by a silica gel column (EtOAc: n-Hexane=l:4) to give compound 35 (107 mg, 72%). '1H-NMR (400 MH z, QDCl) 7.26 (111, d, J=8.6 Hz), 6.85 (IH, d, J=8.6 is Hz), 6.10 (1H, d, J=2.3 H4z), 6.07 (1 H, d, J=2.3 Hz), 5.34 (111, dd, J=2.6, 13.5 H z), 5.04 (1 H, td, J=5.3, 4.6 Hz), 4.99 (111., td, J=1.0, 5.8 Hz), 3.88 (311, s), 3.86 (3H, s) , 3.80 (3H, s), 3.74 (3H, s), 3.46 (1 H, dd, J=6.6, 15.2 H z), 3.44 (1 H, dd, J=5.8, 15.2 H z), 3.02 (1H-, dd, J=13.5, 16.5 Hz), 2.69 (111, dd, J=2.6, 16.5 Hz), 2.00-1.97 (2H, m), 1.94-1.92 (211, m), 1.65 (3H, s), 1.60 (3H, s), 1.52 (311, s). 20 Example 8 3',4',7-0-Triniethylpropolin G (4) -39- CH3 CH3 OCH3 H3C OCH3 H3CO H£ 0 H-3C CH3 OHO [0063] To the mixture of Propolin G (2.30 g, 2.75 mmol), K 2
CO
3 (1.94 g, 13.99 mmol), and acetone (80 mL) Me 2
SO
4 (2.17 mL, 17.35 mmol) was added and the resulting solution was stirred at rt for 0.5 h, and then heated to reflux under nitrogen for 6 h. After removal of the 5 organic solvent, the residue was dissolved in CH 2
CI
2 (40 mL) and washed with H 2 0 (40 mL x 3). The CH- 2 C1 2 layers were dried over Na 2
SO
4 and evaporated under reduced pressure. The residue obtained was purified by a silica gel column (EtOAc-n-Hexane=l:8) to give 4 (954 mg, 65%): ' H-NM R (400 M Hz, CDC1 3 ) [ 12.06 (111, s), 7.26 (I H, d, J=8.4 liz), 6.86 (1 H, d, J=8.4 Hz), 6.03 (1 H, s), 5.50 (11H, dd, J=2.4, 13.4 Iz), 5.17-5.14 (I H, m), 5.04-5.00 (2 1-, m), 3.87 (311, s), io 3.79 (3H, s), 3.79 (6H, s), 3.46-3.45 (211, m), 3.25-3.23 (211, i), 3.05 (11H, dd, J=13.5, 16.7 H1z) , 2.70 (111, dd, J=2.6, 16.7 Hz), 2.02-1.94 (711, m), 1.75 (311, s), 1.67 (3H, s), 1.66 (3H, s), 1.61 (311, s), 1.58 (31H, s) Example 9 6-(2-Hydroxy-2-methylbutyl)-2'-(7-hydroxy-3,7-dimethyloct-2-enyl)-5 15 hydroxy-3',4',7-trimethoxyflavanone (6d) -40-
CH
3
CH
3
OCH
3 HO
OCH
3
H
3 C H3CO O H3C CH3 OHO (NBM-HD-3) [0064] To a solution of compound 4 (530 mg, 0.99 mmol) in THF (15 mL) 49% H 2 SO4 (10 mL) was added at ice bath. After complete addition, the reaction mixture was stirred at room temperature for 8 h and then diluted with H 2 0. The reaction mixture was extracted with CH 2 Cl 2 5 (30 mL x 3). The combined organic layers were dried over Na 2
SO
4 and evaporated under reduced pressure to give a residue, which was purified by a silica gel column (n hexane:FtOAc=l:l) to give pure oil 6d (191 mg, 34%). 'i-NMR (400 MHz, CDCl 3 ) E 12.06 (IlH, brs), 7.27 (11H, d, J=8.6 Iz), 6.86 (111, d, J=8.6 liz), 6.05 (IH, s), 5.50 (Ili, dd, J=2.6, 13.6 lz), 5.03 (Ili, t, J=6.2 l1z), 3.87 (311, s), 3.80 (6H, s), 3.48 (IH, dd, J=5.5, 15.2 lz), 3.42 10 (11H, dd, J=6.1, 15.2 liz), 3.06 (11H, dd9;J=13.6, 17.1 liz), 2.70(111, dd, J=2.7, 17.1 liz), 2.65 2.61 (21H, n), 1.95-1.92(211, m), 1.65 (311, s), 1.41-1.35 (511, m), 1.26 (6H, s), 1.15 (311, s), 1.14 (311, s). Example 10 Other Compounds i5 [0065] The following two compounds are prepared according to the methods as stated above. 41-
CH
3
CH
3
OCH
3
H
3 C' ~OCH 3 H C0 HO' 1
CH
3 OH 0
CH
3
CH
3
OCH
3 H OCH3 HO>{
H
3 CO 0
H
3 C,
CH
3 OH 0 (NBM-HD-2) s Example 11 Inhibition of Cancer Cell Growth by the Compound of the Invention (NBM-iD-1) -42-
H
3
OH
3 O H3H3 OH KK CO .HMSH, OMe HCOH H 3
O
3 OMe H.. K 2 00 3 .DMS H 3 0 acetone, _ H 3 C CH3 OH O
CH
3 OMe O 2
CH
3
CH
3 OMe HO CH 3
CH
3 OMe H3C OMeH2 H H3 OMe MeO 0 H 2
SO,
4 THF Oe 0
H
3 C rt H 3 C HO'I
CH
3 OMeO CH 3 OMeO NBM-HD-1 [0066] The cancer cell line, rat C6 gliorna cells, was cultured in Dulbecco's modified Eagle's medium (DMEM; Gibco) supplemented with penicillin G, streptomycin sulphate, 0.5 mM of L-glutamine and 10% fetal bovine serum (FBS; Gibco) at 37 'C, 5% 5 CO 2 and 95% relative humidity. For all experiments, the cells were seeded at a density of 3x10 5 per well in 6-well plates. After 24 hours, the cells were treated with different concentrations of the compound NBM--ID-l (i.e., the compound of formula III depicted herein). After 48 hours, the cells were observed and counted. According to the results shown in Fig. 1, NBM-HD- I can arrest the growth of rat C6 glioma cells. After the C6 10 glioma cells were incubated with 2.5 pg/mL (see Fig. 1(A)-b), 5 pg/mL (see Fig. 1(A)-c) and 10 pg/mL (see Fig. l(A)-d) of NBM-HD-l for 48 hours, the density of the cells reduced dramatically in comparison with that of control (see Fig. 1(A)-a). The results obtained by cell counting showed the same tendency (see FIG. 1(B)). The above -43.mentioned results indicate that NBM-HD-I can inhibit the growth of C6 gliorna cells in a dose-dependent manner. [0067] l x106 of rat C6 glioma cells were treated with various concentrations of NBM-ID-l (0 pg/mL, 2.5 pg/mL, 5 ug/mL, and 10 ug/nL) for 72 hours. The treated 5 cells were trysinized and collected. The cells were resuspended in 200 pL PBS and then fixed by adding 800 pL of cold 100% ethanol. The resulting cells were fixed overnight at -20W. The cell pellets were collected by centrifugation, resuspended in I mL of hypotonic buffer (0.5% Triton X-100 in PBS and I pg/mL RNase A), and incubated at 370 for 30 minutes. Then, I mL of PI solution (50 pg/mL) was added to the resulting 10 cell pellets. The mixture was allowed to stand at 40 for 30 min. The DNA amounts of the cells were analyzed by FACScan Cytometry (Becton Dickinson) (see Fig. 2). The results of Fig. 2 showed that NBM-HD-1 can significantly inhibit C6 glioma cell growth through modulating the cell cycle arrest on the GO/G I phase in a dose-dependent manner. Example 12 Inhibition of Cell growth and induction of Differentiation of Cancer 15 Cells by the Compound of the Invention (NBM-iD-I) [0068] For the rat C6 glioma cells, the cell cycle related to mRNA expression was examined by RT-P3CR. The total RNAs were isolated from the treated C6 cells by using the RNeasy Mini Kit (Qiagen) according to the manufacturer's instructions. The cDNAs were produced from 500ng of total'RNAs using ReverTra-Plus-TM (TOYOBO). The RT 20 product (1pl) was amplified by PCR with primers to analyze several genes of cell cycle by using GAPDH as an internal control. The results were shown in Fig. 3. According to the results of Fig. 3, NBM-HD-l can modulate the expression of some cell cycle regulators. The results showed that NBM-HD-l can decrease the expression of cyclinDI and cyclinB 1 in a dose-dependent manner. On the contrary, the expression of p21 was increased. [0069] After the C6 glioma cells were incubated with 10 pg/mL NBM-HD- I for 24 s hours, they were fixed and analyzed by the traditional immuno-fluorescent staining method. Staining of glia was carried out by using glial-specific GFAP antibody (SIGMA) as the primary antibody and a fluorescence labeled rabbit immuno-globulin (SIGMA) as the secondary antibody to bind with the primary antibody. The cells which are GFAP positive were excited by a specific light source to emit fluorescence. Also, the nuclei 10 were stained with DAPI. The staining'results were shown in Fig. 4(A). According to Fig. 4(A), NBM-H4D-l can induce the GFAP expression of C6 glioma cancer cells. In contrast with the control group, more GFAP proteins were detected in the photos of the cells being treated with 10 pg/mL of NBM-HD-l. The middle row showed the photos of the cells with DAPI staining in Fig. 4(A). 15 [0070] The GFAP mRNA expression was examined by RT-PICR. The results of Fig. 4(B) showed that the expression of GFAP was increased in a dose-dependent manner. These results indicated that NBM-HD-l can induce the cell differentiation of C6 glioma cancer cells according to the increase of GFAP expression. Example 13 Increase of the Accufnulation of Hyperacetylated Histone in the 20 Cancer Cells Treated with the Compound of the Invention (NBM-HD 1) -5- [0071] Accumulation of hyperacetylated histone H4 was analyzed in the cell lysates by using Western Blotting and the antibody directed against acetylated histone 1-14 (Upstate). The C6 gliora cells were seeded at a density of Ix 106 per 10cm culture dish. After 24 hours, the cells were treated with 10 pg/mL of NBM-HD-l or 4mM sodium 5 butyrate for several hours. The whole-cell lysates were prepared by using denaturing SDS sample buffer and then separated on 15% SDS-polyacrylamide gels. As shown in Fig. 5, both sodium butyrate and NBM-HD-l can increase the accumulation of hyperacetylated histone H4. The amount of acetylated histones was hardly detectable in untreated C6 glioma cells. The amount of acetylated histone H4 of the cells treated with 10 4mM sodium butyrate for 2 hours increased. Sodium butyrate was then removed from the culture medium. After 6 hours, the amount of acetylated histone H4 decreased. The accumulation of acetylated histone H4 increased in the cells treated with NBM-HD-l for 2 hours. After removal of NBM-HID-l, the amount of acetylated histone H4 increased over time. The highest histone acetylation appeared at 6 hours after the compound had is been removed. These results indicated that, similar to sodium butyrate, NBM-HD-I is an HDAC inhibitor. Because NBM--ID-1 is more hydrophobic than sodium butyrate, NBM-HD-l can be retained in thecebls longer than sodium butyrate and continuously induce the acetylation of histone 1-14. Example 14 Inhibition of HDAC Activity by the Compound of the Invention 20 (NBM-ID-1) (0072] The C6 glioma cells were treated with different doses of NBM-HD-l and sodium butyrate (SB). After 24 hours, the cells were harvested to extract the nuclear -46proteins by NucBusterik Protein Extraction Kit (Novagen) as described by the manufacturer's instructions. These extracts were then used in HDAC Activity Assay Kit (Calbiochem) to analyze their HDAC (histone deacetylase) inhibition activities. The HDAC fluorometric substrate, which comprises an acetylated lysine side chain, was 5 incubated with extracted nuclear protein first. Deacetylation of the substrate sensitized the substrate, so that, in the second step, treatment with the Lysine Developer produced a fluorophore. The fluorophore can easily be analyzed by using a fluorescence plate reader. As shown in Fig. 6, NBM-HD-l can inhibit the HDAC activity in C6 glioma cells. Inhibition of HIDAC has been implicated in the induction of differentiation in cancer cells. 10 In this experiment, a well-known compound for HDAC inhibition, sodium butyrate, was used as a positive control. The lower fluorescence unit showed higher HDAC inhibition activity in the experimental group. The results indicated that NBM-HD-1 significantly inhibits HDAC activity. Example 15 Inhibition of HDAC Activity and Change of the Morphology of Cancer 15 Cells by the Compound of the Invention (NBM-IID-1) [0073] The human giloblastoma DBTRG-05MG cancer cells were cultured in RPMI medium 1640 (Gibco) supplemented with penicillin G, streptomycin sulphate, 0.5 mM of L-glutamine and 10% fetal bovine serum (FBS ; Gibco), 100mh/L sodium pyruvate (Gibco), and 1% NEAA (Gibco) at 37 'C, 5% CO 2 and 95% relative humidity. 20 For these experiments, the cells were seeded at a density of 3xl05 per well of 6-well plates. After 24 hours, the cells were treated with different concentrations of NBM-liD-l and 4 mM sodium butyrate. The cells were observed and counted after 72 hours. As shown in Fig. 7, NBM-IID-l significantly inhibited the growth of 05MG cancer cells and changed the morphology of the cells. In 05MG cells (Fig. 7(A)), after incubation with 2.5 pg/mL (Fig. 7(A)-b), 5 pg/mL (Fig. 7(A)-c) and 10 pg/mL (Fig. 7(A)-d) of NBM HD-l for 72 hours, the density of the cells reduced dramatically in comparison with that 5 of the control group (Fig. 7(A)-a). The 05MG cells in the experimental group also changed to become longer than those in the control group. The results of the cell counting (Fig. 7(B)) indicated that sodium butyrate could inhibit the proliferation of 05MG cancer cells, and so could NBM--ID-l. These results indicate that NBM-ID-1 can inhibit the growth of 05MG cells in a dose-dependent manner and change the morphology of 05MG io cancer cells. [0074] The breast cancer MCF-7 cells, were cultured in Dulbecco's modified Eagle's medium (DMEM ; Gibco) supplemented with penicillin G, streptomycin sulphate, 0.5 mM of L-glutamine and 10% fetal bovine serum (FBS ; Gibco) at 37 0 C, 5% CO2 and 95% relative humidity. The cells were seeded at a density of 3 x 105 per well is of 6-well plates. After 24 hours, the cells were treated with different concentrations of compound NBM-HD-1 and 4mM sodium butyrate being used as the positive control. The cells were observed after 48 hours and counted after 96 hours. As shown in Fig. 8, NBM-HD-l significantly inhibits the growth of MCF-7 cancer cells and changes the morphology of the cells. In Fig. 8(A), after the cells were incubated with 2.5 ug/rmL (Fig. 20 8(A)-b), 5 pg/mL (Fig. 8(A)-c) and 10 pg/mL (Fig. 8(A)-d) of NBM-HD-1 for 48 hours, the density of MCF-7 cells reduced dramatically in comparison with that of the control group (Fig. 8(A)-a). The morphology of the MCF-7 cells in the experimental group -48changed in comparison with that in the control group. Fig. 8(B), and showed that 4mM sodium butyrate was able to inhibit-the growth of MCF-7 cells. The results of the cell counting (FIG. 8(B)) indicate that, similar to sodium butyrate, NBM-HD-l inhibits cell growth. These results indicate that NBM-HD-I can inhibit the growth of MCF-7 cancer s cells in a dose-dependent manner and change their morphology. [0075] MCF-7 cancer cells (l x106) in a 100-mm dish were treated with various concentrations of NBM-IHD-1 (0, 2.5, 5, and 1Opg/mL) or 4mM sodium butyrate for 72 hours. The samples were prepared following the steps mentioned in [0063]. The DNA of the cells was then analyzed by FACScan cytometry (Becton Dickinson). As shown in 10 Fig. 9, NBM-HD-l markedly inhibited MCF-7 cell growth via modulation of the cell cycle, arrested on the GO/Gl pha1se6n a dose-dependent manner. The percentage of GO/Gl phase increased from 74.46 to 92.55 in a dose-dependent manner. It was also found that NBM-ID-l significantly decreased both S and G2/M phases of the cells in a dose-dependent manner. 15 [00761 The cell cycle related to p2l mRNA expression was examined by RT-PCR. The total RNAs were isolated from the treated MCF-7 cells and used in the RT reaction. cDNA (I pI) was used as a template to amplify p21 gene by PCR. GAPDH was used as an internal control. As shown in Fig. 10, NBM-HD-l can increase the p21 mRNA expression in MCF-7 cancer cells. In this experiment, MCF-7 cells were treated with 20 different doses of NBM--ID-l futS24-hours. The results indicated that NBM-ID-1 induced the expression of p2l in a dose-dependent manner. -49- [0077] Accumulation of hyperacetylated histone H4 was analyzed in the cell lysates by using Western Blotting and an antibody that binds to acetylated histone H4 (Upstate). The MCF-7 cancer cells were seeded at a density of Ix 106 per 10cm culture dish. After 24 hours, the cells were treated with l0pg/mL of NBM-HD-1 or 4mM 5 sodium butyrate for several hours. The HDAC inhibition by NBM-HD-1 was tested by analyzing the degree of histone acetylation with a specific antibody for hyperacetylated histone H4. The sodium butyrate was used as a positive control. As shown in Fig. 11, the results with MCF-7 cells were similar to those with C6 glioma cells. Example 16 Enhancing the Neurite Outgrowth by the Compound of the Invention io0 (NBM-IID-1) [0078] The growth medium for the NSCs (neural stem cells) and cortical neurons was prepared by adding penicillin-G, streptomycin and 0.5 mM of L-glutamine into a B 27 supplemented neurobasal medium- (Gibco). The unborn fetus was taken out of the fetal sac in the abdominal cavity of a I 7-day pregnant Wistar rat under anesthesia. The 15 cerebral tissue was removed from the fetus and treated with 0.1% trypsin solution at 25 'C for three minutes. After washing with PBS solution 3 times, the cells were dissociated by up and down mixing. The resulting solution was passed through a 70Pm Nylon cell strainer (Falcon) in order to obtain the filtrate that contained cerebral cells. The filtrate was centrifuged at 1000 rpm for 10 minutes and the supernatant was aspirated. The 20 resulting pellet was resuspended in the growth medium prepared as stated above. The resulting suspension contained NSO.
[0079] The cells obtained from the suspension were cultivated in 6-well plates 2 coated with 30 pg/ml of poly-D-lysine (Sigma) at the density of 75 cells/mm . The cells were cultured at 37 C, 5% CO and 95% relative humidity. The growth media contained 0.63 pg/mL of NBM-HD- 1 and the growth media with I u of DMSO was used as the 5 control. The differentiated cells after cultivation were categorically called cortical neurons. [0080] After cultivation for 6 days, live cells were observed by microscope. The lengths of the neurites of the neurons in 6 different fields were measured and averaged. As shown in Fig. 12, NBM--ID-l could promote the neurite outgrowth. In Fig. 12, the io length of the neurites of the experimental group (Fig. 12(A)-b) is longer than that of the control group (Fig. 12(A)-a). After measuring the lengths of the neurites, the result indicated that the average length of-the neurites of the experiment group was greater than that of the control group ( Fig. 12(B)). Example 17 Inhibition of Cancer Cell Growth by the Compound of the Invention 15 (NBM-HD-2) [0081] MCF-7 cancer cells were seeded at a density of 3x105 per well in 6-well plates. After 24 hours, the cells were treated with different concentrations of compound NBM-HD-2 and 4mM sodium butyrate being used as the positive control. The cells were observed and counted after 72 hours. As shown in Fig. 13, NBM-HD-2 significantly inhibits the growth of' MCF-7 20 cancer cells and changes the morphology of the cells. In Fig. 13(A), after the cells were incubated with 2.5 pg/mL (Fig. 13(A)-c), 5 pg/mL (Fig. 13(A)-d), 7.5 pg/mL (Fig. 13(A)-e) and 10 pg/mL (Fig. 13(A)-f) of NBM-HD-2 for 72 hours, the density of MCF-7 cells reduced -51dramatically in comparison with that of the control group (Fig. 13(A)-a). The morphology of the MCF-7 cells in the experimental group changed in comparison with that in the control group. Fig. 13(A) showed that 4mM sodium butyrate was able to inhibit the growth of MCF-7 cells. The results of the cell counting (FIG. 13(B)) indicated that, similar to sodium butyrate, NBM-HD-2 5 inhibited cell growth. These results indicate that NBM--ID-2 can inhibit the growth of MCF-7 cancer cells in a dose-dependent manner and change their morphology. Example 18 Inhibition of Cancer Cell Growth by the Compounds of the Invention (NBM-IID-3) [0082] MCF-7 cancer cells were seeded at a density of 3x105 per well of 6-well plates. 10 After 24 hours, the cells were treated with different concentrations of compound NBM-HD-3 and 4mM sodium butyrate, which was being used as the positive control. The cells were observed and counted after 72 hours. As shown in Fig. 14, NBM-H-ID-3 significantly inhibits the growth of MCF-7 cancer cells and changes the morphology of the cells. In Fig. 14(A), after the cells were incubated with 2.5 pg/mL (Fig. 14(A)-c), 5 pg/mL (Fig. 14(A)-d), 7.5 plg/mL (Fig. 14(A)-c) 15 and 10 pig/mL (Fig. 14(A)-f) of NBM-HD-3 for 72 hours, the density of MCF-7 cells reduced dramatically in comparison with that of the control group (Fig. 14(A)-a). The morphology of the MCF-7 cells in the experimental group changed in comparison with that in the control group. Fig. 14(A) showed that 4mM sodium butyrate was able to inhibit the growth of MCF-7 cells. The results of the cell counting (FIG. 14(B)) indicate that, similar to sodium butyrate, NBM-HD 20 3 inhibits cell growth. These results indicate that NBM-HD-3 can inhibit the growth of MCF-7 cancer cells in a dose-dependent manner and change their morphology. -52-
Claims (18)
1. A compound represented by the following formula (I): R2 R 5 R 1 R3 0 RP, R 8 R 4 R7 wherein 5 R, and R 2 are each independently, O-alkyl, S-alkyl, NH-alkyl, 0-alkenyl, S-alkenyl, NH alkenyl, 0-alkynyl, S-alkynyl, NH-alkynyl, 0-C 3 -scycloalkyl, S-C 3 - 8 cycloalkyl, NH-C 3 - 8 cycloalkyl, 0-unsaturated 5- to 10-membered monocyclic or bicyclic ring, 0-benzyl, S- unsaturated 5- to 10 membered monocyclic or bicyclic ring, NH- unsaturated 5- to 10-membered monocyclic or bicyclic ring, alkyl, alkylenyl, alkynyl, C 3 -scycloalkyl, an unsaturated 5- to 10-membered monocyclic or LO bicyclic ring or a saturated or unsaturated 5- to 10-membered heterocyclic ring comprising at least one ring heteroatom selected from the group consisting of: N, 0 and S; or R, and R 2 can together form dioxolane; R 3 is O-alkyl, S-alkyl, NH-alkyl, 0-alkenyl, S-alkenyl, NH-alkenyl, O-alkynyl, S-alkynyl, NH-alkynyl, 0-C 3 -scycloalkyl, S-C 3 - 8 cycloalkyl, NH-C 3 - 8 cycloalkyl, 0-unsaturated 5- to 10 is membered monocyclic or bicyclic ring, 0-benzyl, S- unsaturated 5- to 10-membered monocyclic or bicyclic ring, NH- unsaturated 5- to 10-membered monocyclic or bicyclic ring, alkyl, alkylenyl, alkynyl, C 3 -scycloalkyl, an unsaturated 5- to 10-membered monocyclic or bicyclic ring or a saturated or unsaturated 5- to 10-membered heterocyclic ring comprising at least one ring heteroatom selected from the group consisting of: N, 0 and S; 6477503 54 R4 is OH, OC(=O)alkyl, 0-alkyl, S-alkyl, NH-alkyl, 0-alkenyl, S-alkenyl, NH-alkenyl, 0 alkynyl, S-alkynyl, NH-alkynyl, O-C 3 - 8 cycloalkyl, S-C 3 - 8 cycloalkyl, NH-C 3 - 8 cycloalkyl, 0 unsaturated 5- to 10-membered monocyclic or bicyclic ring, O-benzyl, S- unsaturated 5- to 10 membered monocyclic or bicyclic ring, NH- unsaturated 5- to 10-membered monocyclic or bicyclic 5 ring, alkyl, alkylenyl, alkynyl, C 3 - 8 cycloalkyl, an unsaturated 5- to 10-membered monocyclic or bicyclic ring or a saturated or unsaturated 5- to 10-membered heterocyclic ring comprising at least one ring heteroatom selected from the group consisting of: N, 0 and S; R 5 is C 4 - 1 6 alkyl or C 4 - 1 6 alkenyl unsubstituted or substituted with one or more CI- 6 alkyl, OH, halogen, CN, NO, N 3 , NH 2 , CHO, OR 9 , SR 9 , NR 9 COOR 9 , oHO,,NI 0 HOO HO .0 , R 6 is C 2 . 1 2 alkyl or C 2 - 12 alkenyl unsubstituted or substituted with one or more C- 6 alkyl, OH, halogen, CN, NO, N 3 , NH 2 , CHO, OR 9 , SR 9 , NR 9 , or HO, 0 H R 7 is hydrogen, halogen, OH, NH 2 , COOH, CHO, CN, NO, =0 or R 7 and R 8 may together is form a double bond, a C 3 . 6 cycloalkyl, or a 5- to 10-membered heterocyclic ring comprising at least a heteroatom selected from the group consisting of N, 0 and S; R 8 is hydrogen, halogen, OH, NH 2 , COOH, CHO, CN or NO; R 9 is phenyl, C(=O)R' 0 or C(=0)OR' 0 ; and R 1 0 is OH, NHOH or NH 2 ; 6477503 55 wherein both R 5 and R 6 are not simultaneously unsubstituted alkyl or alkenyl; or pharmaceutically acceptable salts, stereoisomers, enantiomers, prodrugs or solvates thereof.
2. The compound according to Claim 1, wherein R, and R 2 are each independently OCI. 6 alkyl, 0-phenyl or O-benzyl or R, and R 2 together form dioxalene. s
3. The compound according to Claim 2, wherein R, and R 2 are each independently OCH 3 , OCH 2 CH 3 , OCH 2 CH 2 CH 3 , 0-phenyl or O-benzyl.
4. The compound according to Claim 1, wherein Ri and R 2 together form dioxalene.
5. The compound according to Claim 1, wherein R 3 and R 4 are each independently OCI.
6 alkyl, 0-phenyl or O-benzyl. o 6. The compound according to Claim 1, wherein R 3 and R 4 are each independently OCH 3 , OCH 2 CH 3 , OCH 2 CH 2 CH 3 , 0-phenyl or O-benzyl. H-3 H 3 HO
7. The compound according to Claim 1, wherein R 5 is H 3 C Br H 3 11 H 3 C HO HO HOs 0 H or i5
8. The compound according to Claim 1, wherein R 6 is 6477503 56 HO H 3 H 3 11 HON 3 J Br__ OH H H 3 C H 3 C H 3 C POS ClH 3 HON 0 CH 3 HO H
9. The compound according to Claim 1, which is selected from the group consisting of: CH3 CH3 OCH3 HO H3C OCH3 SH 3C O 0 H 3 C CH3 OCH3 0 N3H3 H3 Me N-3C H3C OeOe N 3 CH 3 OMe 0 6477503 57 H 2 N H3 H3 Me H 3 eOMe H 3 C HNCH 3 OMe 0 H 3 C CH 3 OOe 0e MeOO Br CH3 O He Oe MeO O H3C CCH3 OMe O HOH3H Me OMe MeO O0 HO OMe O 6477503 58 HO OMe MeO O HO N Oee MeOMO H H I4Me 00~e 0 H CH3 OH 0 6477503 59 CH3 CH3 OCH3 HaC OCH3 1 1 C H a C O 0 HaC HO CH3 OH 0 and CH3 CH3 OCH3 HO HaC OCH3 H C H CO 0 H13C, CH3 OH 0
10. The compound according to Claim 1, which is selected from the group consisting of: HOCH3 CH3 OCH3 s H3COCH3 H3 3C O O0 H3C HO CH3 OCH3 O 6477503 60 CH CH OCH HO H 3 C OCH H 3 CO 0 H 3 C HO CH 3 OH 0 CH3 CH3 OCH3 HaC OCH3 H3CO 0 H13C CH3 OH 0 and CH3 CH3 OCHa HO HaC OCH3 H C H CO 0 HAC CH3 OH 0
11. A stereoisomer of the compound of formula (1) as defined in Claim 1, which s is represented by the following formula (11): 6477503 61 R 2 R5 Ri R 3 0 R 6 R8 R 4 R 7 wherein RI, R 2 , R3, R4, Rs, R6, R7 and R 8 are defined as those in formula (I).
12. A pharmaceutical composition comprising the compound of any one of Claims 1 to I1 or pharmaceutically acceptable salts, stereoisomers, enantiomers, prodrugs and solvates thereof 5 as an active ingredient and a pharmaceutically acceptable carrier.
13. Use of the compound of any one of Claims I to I1 or pharmaceutically acceptable salts, stereoisomers, enantiomers, prodrugs and solvates thereof in the manufacture of a medicament for inhibiting histone deacetylase (HDAC) in a subject.
14. Use of the compound of any one of Claims 1 to I1 or pharmaceutically acceptable .0 salts, stereoisomers, enantiomers, prodrugs and solvates thereof in the manufacture of a medicament for treating tumor or cell proliferative disease in a subject.
15. Use of the compound of any one of Claims I to I I or pharmaceutically acceptable salts, stereoisomers, enantiomers, prodrugs and solvates thereof in the manufacture of a medicament for enhancing the neurite outgrowth in a subject. 15
16. Use of the compound of any one of Claims I to I I or pharmaceutically acceptable salts, stereoisomers, enantiomers, prodrugs and solvates thereof in the manufacture of a medicament for treating neurodegenerative diseases and human spinal muscular atrophy (SMA) in a subject.
17. The compound of formula (I), according to claim 1, substantially as herein described with reference to any of the figures or examples. 6477503 62
18. The compound of formula (II), according to claim I1, substantially as herein described with reference to any of the figures or examples. DATED this Eleventh Day of July, 2012 5 Naturewise Biotech & Medicals Corporation Patent Attorneys for the Applicant SPRUSON & FERGUSON 6477503
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| AU2007216781A AU2007216781B2 (en) | 2007-09-14 | 2007-09-14 | Compounds for the inhibition of histone deacetylase |
Applications Claiming Priority (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| AU2007216781A AU2007216781B2 (en) | 2007-09-14 | 2007-09-14 | Compounds for the inhibition of histone deacetylase |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| AU2007216781A1 AU2007216781A1 (en) | 2009-04-02 |
| AU2007216781B2 true AU2007216781B2 (en) | 2012-08-30 |
Family
ID=40542184
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AU2007216781A Active AU2007216781B2 (en) | 2007-09-14 | 2007-09-14 | Compounds for the inhibition of histone deacetylase |
Country Status (1)
| Country | Link |
|---|---|
| AU (1) | AU2007216781B2 (en) |
Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN102276568B (en) * | 2011-08-11 | 2013-05-22 | 兰州大学 | Compounds as cell cycle blockers and antineoplastic active agents |
Families Citing this family (2)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP2277387B1 (en) * | 2009-07-22 | 2016-10-19 | NatureWise Biotech & Medicals Corporation | New use of histone deacetylase inhibitors in changing mrjp3 protein in royal jelly |
| US8784873B2 (en) * | 2009-07-22 | 2014-07-22 | Naturewise Biotech & Medicals Corporation | Use of histone deacetylase inhibitors in changing MRJP3 protein in royal jelly |
Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP1640371A1 (en) * | 2003-06-20 | 2006-03-29 | Pokka Corporation | Flavanone compound and uses thereof |
-
2007
- 2007-09-14 AU AU2007216781A patent/AU2007216781B2/en active Active
Patent Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP1640371A1 (en) * | 2003-06-20 | 2006-03-29 | Pokka Corporation | Flavanone compound and uses thereof |
Non-Patent Citations (9)
| Title |
|---|
| CAplus accession no. 1986:421653 & LINCOLN, D. E. et al. "Flavonoids from Diplacus aurantiacus leaf resin" Biochemical Systematics and Ecology 1986, 14(2), 195-8 * |
| CAplus accession no. 1991:101425 & FUKAI, T. et al. "NMR spectra of isoprenoid-substituted phenols. 3. Structure of 6- or 8-isoprenoid substituted flavanone: chemical shift of the hydrogen-bonded hydroxyl group" Heterocycles 1990, 31(10) * |
| CAplus accession no. 1996:631130 & HUANG, C. S. et al. "Synthesis of (PLUS OR MINUS)-farnesyl flavanone and farnesyl acetophenone" Chinese Chemical Letters 1996, 7(8), 701-702 * |
| CAplus accession no. 2000:595056 & FUKAI, T. et al. "Cytotoxic activity of low molecular weight polyphenols against human oral tumor cell lines" Anticancer Research 2000, 20(4), 2525-2536 * |
| CAplus accession no. 2005:128135 & MURPHY, B. T. et al. "Cytotoxic flavanones of Schizolaena hystrix from the Madagascar rainforest" J. Nat. Prod. 2005, 68(3), 417-419 * |
| CAplus accession no. 2005:383232 & PHOMMART, S. et al. "Constituents of the leaves of Macaranga tanarius" J. Nat. Prod. 2005, 68(6), 927-930 * |
| CAplus accession no. 2007:748581 & SMEJKAL, K. et al. "C-Geranyl Compounds from Paulownia tomentosa Fruits" J. Nat. Prod., 2007, 70(8), 1244-1248, published online 11 July 2007 * |
| CAplus accession no. 2007:750096 &CN 1990480 A (NATUREWISE BIOTECH AND MEDICALS CORPORATION) 4 July 2007 * |
| CHEN, C. N. et al. Evidenced-based Complementary and Alternative Medicine 2004, 1(2), 175-185 * |
Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN102276568B (en) * | 2011-08-11 | 2013-05-22 | 兰州大学 | Compounds as cell cycle blockers and antineoplastic active agents |
Also Published As
| Publication number | Publication date |
|---|---|
| AU2007216781A1 (en) | 2009-04-02 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| AU2003217393B2 (en) | Ansamycins having improved pharmacological and biological properties | |
| Sharma et al. | Synthesis and biological evaluation of new benzimidazole-thiazolidinedione hybrids as potential cytotoxic and apoptosis inducing agents | |
| Cheng et al. | Design, synthesis and discovery of 5-hydroxyaurone derivatives as growth inhibitors against HUVEC and some cancer cell lines | |
| CN101854937B (en) | Novel stat3 pathway inhibitors and cancer stem cell inhibitors | |
| Qi et al. | Synthesis and biological evaluation of 1-(benzofuran-3-yl)-4-(3, 4, 5-trimethoxyphenyl)-1H-1, 2, 3-triazole derivatives as tubulin polymerization inhibitors | |
| Yan et al. | Design, synthesis, and biological evaluation of cyclic-indole derivatives as anti-tumor agents via the inhibition of tubulin polymerization | |
| JP2012518645A (en) | Novobiocin analogs having modified sugar moieties | |
| US8008344B2 (en) | Compounds for the inhibition of histone deacetylase | |
| Jiang et al. | Anti-angiogenic and anticancer effects of baicalein derivatives based on transgenic zebrafish model | |
| Byczek-Wyrostek et al. | Simple 2 (5H)-furanone derivatives with selective cytotoxicity towards non-small cell lung cancer cell line A549–synthesis, structure-activity relationship and biological evaluation | |
| AU2007216781B2 (en) | Compounds for the inhibition of histone deacetylase | |
| EP2774919A1 (en) | Novel sulfonamide TRPA1 receptor antagonists | |
| Zhou et al. | N-Arylsulfonylsubstituted-1H indole derivatives as small molecule dual inhibitors of signal transducer and activator of transcription 3 (STAT3) and tubulin | |
| Fang et al. | Design and synthesis of novel monoterpenoid indole alkaloid-like analogues and their antitumour activities in vitro | |
| Kwiecień et al. | Synthesis and biological evaluation of 3-functionalized 2-phenyl-and 2-alkylbenzo [b] furans as antiproliferative agents against human melanoma cell line | |
| Mohamed et al. | Synthesis and characterization of new diiodocoumarin derivatives with promising antimicrobial activities | |
| EP2045247B1 (en) | Compounds for the inhibition of histone deacetylase | |
| JP5421524B2 (en) | Compounds for inhibiting histone deacetylase | |
| CN101863766A (en) | Beta-hydroxyisovaleryl shikonin derivative and preparation method thereof | |
| US11345692B1 (en) | 3-vinylquinolines as cancer cells inhibitors | |
| KR101129093B1 (en) | Compounds for the inhibition of histone deacetylase | |
| HK1130258B (en) | Compounds for the inhibition of histone deacetylase | |
| Han et al. | Design, synthesis, and biological activity evaluation of (-)-6-O-desmethylantofine analogues as potent anti-cancer agents | |
| JP2005529079A (en) | Compounds and methods for treating cell proliferative disorders | |
| FI62531C (en) | PROCEDURE FOR THE FRAMSTATION OF THE THERAPEUTIC SYSTEM 3-YAN-N- (N N-DIMETHYLAMINO-PROPYL) -IMINODIBENSYL OCH SYRAADD ITONSSALTER DAERAV |
Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| FGA | Letters patent sealed or granted (standard patent) | ||
| PC | Assignment registered |
Owner name: NOVELWISE PHARMACEUTICAL CORPORATION Free format text: FORMER OWNER(S): NATUREWISE BIOTECH & MEDICALS CORPORATION |