AU2009228214B2 - Dioxolane and dioxolanone fused indolobenzadiazepine HCV NS5B inhibitors - Google Patents
Dioxolane and dioxolanone fused indolobenzadiazepine HCV NS5B inhibitorsInfo
- Publication number
- AU2009228214B2 AU2009228214B2 AU2009228214A AU2009228214A AU2009228214B2 AU 2009228214 B2 AU2009228214 B2 AU 2009228214B2 AU 2009228214 A AU2009228214 A AU 2009228214A AU 2009228214 A AU2009228214 A AU 2009228214A AU 2009228214 B2 AU2009228214 B2 AU 2009228214B2
- Authority
- AU
- Australia
- Prior art keywords
- hcv
- alkyl
- compound
- inhibitors
- hydrogen
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Ceased
Links
- 108700008776 hepatitis C virus NS-5 Proteins 0.000 title claims description 11
- 239000003112 inhibitor Substances 0.000 title claims description 11
- WNXJIVFYUVYPPR-UHFFFAOYSA-N 1,3-dioxolane Chemical compound C1COCO1 WNXJIVFYUVYPPR-UHFFFAOYSA-N 0.000 title description 5
- KMTRUDSVKNLOMY-UHFFFAOYSA-N Ethylene carbonate Chemical compound O=C1OCCO1 KMTRUDSVKNLOMY-UHFFFAOYSA-N 0.000 title description 4
- 150000001875 compounds Chemical class 0.000 claims description 84
- -1 aikylaminoalkyl Chemical group 0.000 claims description 44
- 125000000217 alkyl group Chemical group 0.000 claims description 43
- 239000001257 hydrogen Substances 0.000 claims description 34
- 229910052739 hydrogen Inorganic materials 0.000 claims description 33
- 125000004435 hydrogen atom Chemical group [H]* 0.000 claims description 31
- 238000000034 method Methods 0.000 claims description 28
- 239000000203 mixture Substances 0.000 claims description 22
- 150000003839 salts Chemical class 0.000 claims description 20
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 claims description 15
- 102000014150 Interferons Human genes 0.000 claims description 9
- 108010050904 Interferons Proteins 0.000 claims description 9
- 125000000753 cycloalkyl group Chemical group 0.000 claims description 9
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 claims description 9
- 230000008901 benefit Effects 0.000 claims description 7
- 125000002757 morpholinyl group Chemical group 0.000 claims description 7
- 229930182912 cyclosporin Natural products 0.000 claims description 6
- 125000004985 dialkyl amino alkyl group Chemical group 0.000 claims description 6
- 125000004193 piperazinyl group Chemical group 0.000 claims description 6
- 108060004795 Methyltransferase Proteins 0.000 claims description 5
- 229910003844 NSO2 Inorganic materials 0.000 claims description 5
- 101800001019 Non-structural protein 4B Proteins 0.000 claims description 5
- 101800001014 Non-structural protein 5A Proteins 0.000 claims description 5
- 125000003545 alkoxy group Chemical group 0.000 claims description 5
- 239000003937 drug carrier Substances 0.000 claims description 5
- 125000004103 aminoalkyl group Chemical group 0.000 claims description 4
- 125000002393 azetidinyl group Chemical group 0.000 claims description 4
- 125000000113 cyclohexyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 claims description 4
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 claims description 4
- 125000004568 thiomorpholinyl group Chemical group 0.000 claims description 4
- 208000005176 Hepatitis C Diseases 0.000 claims description 3
- 125000003342 alkenyl group Chemical group 0.000 claims description 3
- 125000000278 alkyl amino alkyl group Chemical group 0.000 claims description 3
- 125000003386 piperidinyl group Chemical group 0.000 claims description 3
- 125000000719 pyrrolidinyl group Chemical group 0.000 claims description 3
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 claims description 2
- 125000004453 alkoxycarbonyl group Chemical group 0.000 claims description 2
- 125000003282 alkyl amino group Chemical group 0.000 claims description 2
- 125000004448 alkyl carbonyl group Chemical group 0.000 claims description 2
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 claims description 2
- 125000001584 benzyloxycarbonyl group Chemical group C(=O)(OCC1=CC=CC=C1)* 0.000 claims description 2
- 125000003917 carbamoyl group Chemical group [H]N([H])C(*)=O 0.000 claims description 2
- 125000006254 cycloalkyl carbonyl group Chemical group 0.000 claims description 2
- 125000004663 dialkyl amino group Chemical group 0.000 claims description 2
- 125000004692 haloalkylcarbonyl group Chemical group 0.000 claims description 2
- UYWQUFXKFGHYNT-UHFFFAOYSA-N phenylmethyl ester of formic acid Natural products O=COCC1=CC=CC=C1 UYWQUFXKFGHYNT-UHFFFAOYSA-N 0.000 claims description 2
- 125000004076 pyridyl group Chemical group 0.000 claims description 2
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- 125000001475 halogen functional group Chemical group 0.000 claims 1
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- 230000000694 effects Effects 0.000 description 20
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- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-Dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 16
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- OKKJLVBELUTLKV-MZCSYVLQSA-N Deuterated methanol Chemical compound [2H]OC([2H])([2H])[2H] OKKJLVBELUTLKV-MZCSYVLQSA-N 0.000 description 14
- 238000003556 assay Methods 0.000 description 14
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- 239000000543 intermediate Substances 0.000 description 13
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- HEDRZPFGACZZDS-MICDWDOJSA-N Trichloro(2H)methane Chemical compound [2H]C(Cl)(Cl)Cl HEDRZPFGACZZDS-MICDWDOJSA-N 0.000 description 10
- 125000002147 dimethylamino group Chemical group [H]C([H])([H])N(*)C([H])([H])[H] 0.000 description 10
- 238000002866 fluorescence resonance energy transfer Methods 0.000 description 10
- 125000000472 sulfonyl group Chemical group *S(*)(=O)=O 0.000 description 10
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 9
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- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 8
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 8
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 8
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- DTQVDTLACAAQTR-UHFFFAOYSA-N trifluoroacetic acid Substances OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 8
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 7
- 239000003153 chemical reaction reagent Substances 0.000 description 7
- 229940079322 interferon Drugs 0.000 description 7
- AKHNMLFCWUSKQB-UHFFFAOYSA-L sodium thiosulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=S AKHNMLFCWUSKQB-UHFFFAOYSA-L 0.000 description 7
- PMATZTZNYRCHOR-CGLBZJNRSA-N Cyclosporin A Chemical compound CC[C@@H]1NC(=O)[C@H]([C@H](O)[C@H](C)C\C=C\C)N(C)C(=O)[C@H](C(C)C)N(C)C(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](CC(C)C)N(C)C(=O)[C@@H](C)NC(=O)[C@H](C)NC(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](C(C)C)NC(=O)[C@H](CC(C)C)N(C)C(=O)CN(C)C1=O PMATZTZNYRCHOR-CGLBZJNRSA-N 0.000 description 6
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- 108010036949 Cyclosporine Proteins 0.000 description 6
- PEDCQBHIVMGVHV-UHFFFAOYSA-N Glycerine Chemical compound OCC(O)CO PEDCQBHIVMGVHV-UHFFFAOYSA-N 0.000 description 6
- 101710118046 RNA-directed RNA polymerase Proteins 0.000 description 6
- 239000011324 bead Substances 0.000 description 6
- PFKFTWBEEFSNDU-UHFFFAOYSA-N carbonyldiimidazole Chemical compound C1=CN=CN1C(=O)N1C=CN=C1 PFKFTWBEEFSNDU-UHFFFAOYSA-N 0.000 description 6
- 229960001265 ciclosporin Drugs 0.000 description 6
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- NVBFHJWHLNUMCV-UHFFFAOYSA-N sulfamide Chemical compound NS(N)(=O)=O NVBFHJWHLNUMCV-UHFFFAOYSA-N 0.000 description 6
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- IWUCXVSUMQZMFG-AFCXAGJDSA-N Ribavirin Chemical compound N1=C(C(=O)N)N=CN1[C@H]1[C@H](O)[C@H](O)[C@@H](CO)O1 IWUCXVSUMQZMFG-AFCXAGJDSA-N 0.000 description 5
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Description
DIOXOLANE AND DIOXOLANONE FUSED INDOLOBENZADIAZEPINE HCV
NS5B INHIBITORS
CROSS-REFERENCE TO RELATED APPLICATIONS
This application claims the benefit of U.S. provisional application serial number 61/039967 filed March 27, 2008.
BACKGROUND OF THE INVENTION
The disclosure generally relates to the novel compounds of formula I, including their salts, which have activity against hepatitis C virus (HCV) and are useful in treating those infected with HCV. The disclosure also relates to compositions and methods of using these compounds.
Hepatitis C virus (HCV) is a major human pathogen, infecting an estimated 170 million persons worldwide - roughly five times the number infected by human immunodeficiency virus type 1 , A substantial fraction of these HCV infected individuals develop serious progressive liver disease, including cirrhosis and hepatocellular carcinoma (Lauer, G. M.; Walker, B. D. JV. Engl. J. Med. 2001, 345, 41-52).
HCV is a positive-stranded RNA virus. Based on a comparison of the deduced amino acid sequence and the extensive similarity in the 5 '-untranslated region, HCV has been classified as a separate genus in the Flaviviridae family. All members of the Flaviviridae family have enveloped virions that contain a positive stranded RNA genome encoding all known virus- specific proteins via translation of a single, uninterrupted, open reading frame.
Considerable heterogeneity is found within the nucleotide and encoded amino acid sequence throughout the HCV genome. At least six major genotypes have been characterized, and more than 50 subtypes have been described. The major genotypes of HCV differ in their distribution worldwide, and the clinical significance of the
genetic heterogeneity of HCV remains elusive despite numerous studies of the possible effect of genotypes on pathogenesis and therapy.
The single strand HCV RNA genome is approximately 9500 nucleotides in length and has a single open reading frame (ORF) encoding a single large polyprotein of about 3000 amino acids. In infected cells, this polyprotein is cleaved at multiple sites by cellular and viral proteases to produce the structural and non-structural (NS) proteins. In the case of HCV, the generation of mature non- structural proteins (NS2, NS3, NS4A, NS4B, NS5A, and NS5B) is effected by two viral proteases. The first one is believed to be a metalloprotease and cleaves at the NS2-NS3 junction; the second one is a serine protease contained within the N-terminal region of NS 3 (also referred to as NS 3 protease) and mediates all the subsequent cleavages downstream of NS3, both in cis, at the NS3-NS4A cleavage site, and in trans, for the remaining NS4A-NS4B, NS4B-NS5A, NS5 A-NS5B sites. The NS4A protein appears to serve multiple functions, acting as a cofactor for the NS 3 protease and possibly assisting in the membrane localization of NS3 and other viral replicase components. The complex formation of the NS 3 protein with NS4A seems necessary to the processing events, enhancing the proteolytic efficiency at all of the sites. The NS3 protein also exhibits nucleoside triphosphatase and RNA helicase activities. NS5B (also referred to as HCV polymerase) is a RNA-dependent RNA polymerase that is involved in the replication of HCV. The HCV NS 5 B protein is described in "Structural Analysis of the Hepatitis C Virus RNA Polymerase in Complex with Ribonucleotides (Bressanelli; S. et al, Journal of Virology 2002, 3482-3492; and Defrancesco and Rice, Clinics in Liver Disease 2003, 7, 211-242.
Currently, the most effective HCV therapy employs a combination of alpha- interferon and ribavirin, leading to sustained efficacy in 40% of patients (Poynard, T, et al. Lancet 1998, 352, 1426-1432). Recent clinical results demonstrate that pegylated alpha-interferon is superior to unmodified alpha-interferon as monotherapy (Zeuzem, S. et al. N. Engl. J. Med. 2000, 343, 1666-1672). However, even with experimental therapeutic regimens involving combinations of pegylated alpha- interferon and ribavirin, a substantial fraction of patients do not have a sustained
reduction in viral load. Thus, there is a clear and important need to develop effective therapeutics for treatment of HCV infection.
The invention provides technical advantages, for example, the compounds are novel and are effective against hepatitis C. Additionally, the compounds provide advantages for pharmaceutical uses, for example, with regard to one or more of their mechanism of action, binding, inhibition efficacy, target selectivity, solubility, safety profiles, or bioavailability.
HCV NS5B inhibitors have been disclosed in U.S. Patent 7,399,758.
DESCRIPTION OF THE INVENTION
The invention encompasses compounds of formula I, including pharmaceutically acceptable salts, and compositions and methods of treatment using these compounds.
One aspect of the invention is a compound of formula I
where:
R1 is CO2R8 or CONR9R10;
R2 is hydrogen, alkyl, aminoalkyl, alkylaminoalkyl, or dialkylaminoalkyl;
R3 is hydrogen, alkyl, aminoalkyl, alkylaminoalkyl, or dialkylaminoalkyl;
or NR2R3 taken together is azetidinyl, pyrrolidinyl, piperidmyl, piperazinyl, N- (alkyl)piperazinyl, morpholinyl, thiomorpholinyl, homopiperidinyl, or homomorpholinyl, and is substituted with 0-3 alkyl substituents;
or
R4 is hydrogen or alkyl;
R5 is hydrogen or alkyl;
or R4 and R5 taken together is oxo;
R6 is hydrogen} halo, alkyl, alkenyl, hydroxy, benzyloxy, or alkoxy;
R is cycloalkyl;
R8 is hydrogen or alkyl;
R9 is hydrogen, alkyl, alky!SO2, cycloalkylSO2> haloalkylSO2, (R11)(R12)NSO2s or (RI3)SO2;
R10 is hydrogen or alkyl;
R11 is hydrogen or alkyl;
R12 is hydrogen or alkyl;
R13 is azetidinyl, pyrroHdinyl, piperidinyl, piperazinyl, N-(alkyl)piperazinyl, morpholinyl, thiomorpholinyl, homopiperidinyl, or homomorpholinyl; and
R14 is hydrogen, alkyl, cycloalkyl, (cycloalkyl)alkyl, alkylcarbonyl, cycloalkylcarbonyl, haloalkylcarbonyl, alkoxycarbonyl, alkylSO2, cycloalkylSO2,
haloalkylSO2, aminocarbonyl, (alkylamino)carbonyl, (dialkylamino)carbonyl, benzyl, benzyloxycarbonyl, or pyridinyl;
or a pharmaceutically acceptable salt thereof.
Another aspect of the invention is a compound of formula I where R1 is CONR9R10; R2 is dialkylaminoalkyl; R3 is alkyl; or NR2R3 taken together is morpholinyl substituted with 2 alkyl substituents or NR2R3 taken together is
; R4 is hydrogen or alkyl; R5 is hydrogen or alkyl; or R4 and R5 taken together is oxo; R6 is alkoxy; R7 is cycloalkyl; R9 is (R1 ')(R12)NSO2; R11 is alkyl; R12 is alkyl; and R14 is alkyl; or a pharmaceutically acceptable salt thereof.
Another aspect of the invention is a compound of formula I where R1 CONHSO2NMe2; R2 is dimethylaminoethyl; R3 is methyl; or NR2R3 taken together is 3 ,5 -dimethylmorpholinyl or NR R taken together is 3 -methyl-3 , 8- diazabicyclo[3.2.1]oct-8-yl; R4 is hydrogen or methyl; R5 is hydrogen or methyl; or R4 and R5 taken together is oxo; R6 is methoxy; R7 is cyclohexyl; or a pharmaceutically acceptable salt thereof.
Another aspect of the invention is a compound of formula I where R1 is
CONR9R10; R9 is alkylSO2, cycloalkylSO2, haloalkylSO2, (R! 1)(R12)NSO2j or (R13)SO2; and R10 is hydrogen.
Another aspect of the invention is a compound of formula I where R0 is hydrogen.
Another aspect of the invention is a compound of formula I where R6 is methoxy.
Another aspect of the invention is a compound of formula I where R7 is cyclohexyl.
Another aspect of the invention is a compound of formula I where R is (RU)(RΪ2)NSO2 or (RΪ3)SO2.
For a compound of Formula I, the scope of any instance of a variable substituent, including R! , R2, R3, R4, R5, R6, R7, R8, R9, R10, R1 ' , R12, R13, and R14, can be used independently with the scope of any other instance of a variable substituent. As such, the invention includes combinations of the different aspects.
Unless specified otherwise, these terms have the following meanings. "Alkyl" means a straight or branched alkyl group composed of 1 to 6 carbons.
"Alkenyl" means a straight or branched alkyl group composed of 2 to 6 carbons with at least one double bond. "Alkynyl" means a straight or branched alkyl group composed of 2 to 6 carbons with at least one triple bond. "Cycloalkyl" means a monocyclic ring system composed of 3 to 7 carbons. "Haloalkyl" and "haloalkoxy" include all halogenated isomers from monohalo to perhalo. Terms with a hydrocarbon moiety (e.g. alkoxy) include straight and branched isomers for the hydrocarbon portion. Parenthetic and multiparenthetic terms are intended to clarify bonding relationships to those skilled in the art. For example, a term such as ((R)alkyl) means an alkyl substituent further substituted with the substituent R.
The invention includes all pharmaceutically acceptable salt forms of the compounds. Pharmaceutically acceptable salts are those in which the counter ions do not contribute significantly to the physiological activity or toxicity of the compounds and as such function as pharmacological equivalents. These salts can be made according to common organic techniques employing commercially available reagents. Some anionic salt forms include acetate, acistrate, besylate, bromide, chloride, citrate, fumarate, glucouronate, hydrobromide, hydrochloride, hydroiodide, iodide, lactate, maleate, mesylate, nitrate, pamoate, phosphate, succinate, sulfate, tartrate, tosylate, and xinofoate. Some cationic salt forms include ammonium, aluminum, benzathine, bismuth, calcium, choline, diethylamine, diethanolamine, lithium, magnesium, meglumine, 4-phenylcyclohexylamine, piperazme, potassium, sodium, tromethamine, and zinc.
Some of the compounds of the invention possess asymmetric carbon atoms (see, for example, the compounds below). The invention includes all stereoisomeric forms, including enantiomers and diastereomers as well as mixtures of stereoisomers such as racemates. Some stereoisomers can be made using methods known in the art. Stereoisomeric mixtures of the compounds and related intermediates can be separated into individual isomers according to methods commonly known in the art.
Synthetic Methods
The compounds may be made by methods known in the art including those described below and including variations within the skill of the art. Some reagents and intermediates are known in the art. Other reagents and intermediates can be made by methods known in the art using readily available materials. The variables (e.g. numbered "R" substituents) used to describe the synthesis of the compounds are intended only to illustrate how to make the compounds and are not to be confused with variables used in the claims or in other sections of the specification. The following methods are for illustrative purposes and are not intended to limit the scope of the invention.
Abbreviations used in the schemes generally follow conventions used in the art. Chemical abbreviations used in the specification and examples are defined as follows: "NaHMDS" for sodium bis(trimethylsilyl)amide; "DMF" for N5N- dimethylformamide; "MeOH" for methanol; "NBS" for N~bromosuccinimide; "Ar" for aryl; "TFA" for trifluoroacetic acid; "LAH" for lithium aluminum hydride; "BOC", "DMSO" for dimethylsulfoxide; "h" for hours; "rt" for room temperature or retention time (context will dictate); "min" for minutes; "EtOAc" for ethyl acetate;
1THF" for tetrahydrofuran; "EDTA" for ethylenediaminetetraacetic acid; "Et2O" for diethyl ether; "DMAP" for 4-dimethylaminopyridme; "DCE" for 1,2-dichloroethane; "ACN" for acetonitrile; "DME" for 1 ,2-dimethoxyethane; "HOBt" for 1- hydroxybenzotriazole hydrate; "DIEA" for diisopropylethylamine, "Nf for CF3(CF2)3SO2-; and "TMOF" for trimethylorthoformate.
Some of the compounds can be synthesized by the methods illustrated in Scheme 1. Hydrolysis of known 5H-indolo[2;l-β][2]benzazepine esters with nucleophilic hydroxides can generate the corresponding carboxylic acid which can then be coupled with a variety of primary or secondary amines to form the corresponding amides using one of the many known standard amidation conditions. The resulting unsaturated amide can be subjected to dihyroxylation conditions, typlicaily employing catalytic osmium tetroxide or ruthenium(III) chloride with stoichiometric quantities of a co-oxidant to form cis-diols compounds. The cis-diols can then be cyclized to form 1 ,3-dioxolane compounds under acid conditions using ketones , aldehydes or enol ethers as reactants. Alternatively, the 1,3 dioxolane (or dioxolanone) compounds can be formed under basic conditions using reactants that have two leaving groups on the same carbon which is susceptible to nucleophilic attack.
Scheme 1.
Alternatively the order of the steps can be altered to arrive at the same molecules as shown in schemes 2 and 3. Scheme 2 demonstrates that starting from known 5H-indolo[2,l-β][2]benzazepine ester, carboxylic acids, the amide formation, dihydroxylation and dioxolane (dioxolanone) formation can precede installation of the acyl sulfonamide/sulfamide moiety. The acyl sulfonamide/sulfamide can be installed by hydrolyzing the ester and then coupling using an appropriate coupling reagent such as CDI or EDC and a sulfonamide/sulfamide. The route shown in Scheme 3 starts with a selective hydrolysis of 5H-indolo[2,l-α][2]benzazepine diester using TFA which can produce the aryl carboxylic acid. This acid can be coupled to a sulfonamide/sulfamide and the resulting acyl sulfonamide/sulfamide can be dihydroxylated and cyclized as described above to form dioxolane (or dioxolanone) compounds. Hydrolysis of the ester can form a carboxylic acid which can leave the amide coupling as the final step.
Scheme 2.
Scheme 3.
1 ) selective hydrolysis
2) sulfonamide or H sulfamide coupling
Biological Methods
The compounds demonstrated activity against HCV NS5B as determined in the following HCV RdRp assays.
HCVNS5B RdRp cloning, expression, and purification. The cDNA encoding the NS 5 B protein of HCV, genotype Ib5 was cloned into the pET21a expression vector. The protein was expressed with an 18 amino acid C-terminal truncation to enhance the solubility. The E. coli competent cell line BL21(DE3) was used for expression of the protein. Cultures were grown at 37 0C for ~ 4 hours until the cultures reached an optical density of 2.0 at 600 nm. The cultures were cooled to 20 0C and induced with 1 mM IPTG. Fresh ampicillin was added to a final concentration of 50 μg/ml and the cells were grown overnight at 20 0C.
Cell pellets (3L) were lysed for purification to yield 15-24 mgs of purified NS5B. The lysis buffer consisted of 20 mM Tris-HCl, pH 7.4, 500 mM NaCl, 0.5% triton X-IOO, 1 mM DTT, ImM EDTA, 20% glycerol, 0.5 mg/ml lysozyme, 10 mM MgC12, 15 ug/ml deoxyribonuclease I5 and Complete TM protease inhibitor tablets (Roche). After addition of the lysis buffer, frozen cell pellets were resuspended using a tissue homogenizer. To reduce the viscosity of the sample, aliquots of the lysate were sonicated on ice using a microtip attached to a Branson sonicator. The sonicated lysate was centrifuged at 100,000 x g for lhr at 4 0C and filtered through a 0.2 μm filter unit (Corning).
The protein was purified using three sequential chromatography steps: Heparin sepharose CL-6B, polyU sepharose 4B, and Hitrap SP sepharose (Pharmacia). The chromatography buffers were identical to the lysis buffer but contained no lysozyme, deoxyribonuclease I, MgC12 or protease inhibitor and the NaCl concentration of the buffer was adjusted according to the requirements for charging the protein onto the column. Each column was eluted with a NaCl gradient which varied in length from 5-50 column volumes depending on the column type. After the final chromatography step, the resulting purity of the enzyme is >90% based on SDS-PAGE analysis. The enzyme was aliquoted and stored at -80 0C.
Standard HCV NS5B RdRp enzyme assay. HCV RdRp genotype Ib assays were run in a final volume of 60 μl in 96 well plates (Costar 3912). The assay buffer is composed of 20 mM Hepes, pH 7.5, 2.5 mM KCl, 2.5 mM MgC12, 1 mM DTT, 1.6 U RNAse inhibitor (Promega N2515), 0.1 mg/ml BSA (Promega R3961), and 2 % glycerol. All compounds were serially diluted (3-fold) in DMSO and diluted further in water such that the final concentration of DMSO in the assay was 2%. HCV RdRp genotype Ib enzyme was used at a final concentration of 28 nM. A polyA template was used at 6 nM, and a biotinylated oligo-dT12 primer was used at 180 nM final concentration. Template was obtained commercially (Amersham 27- 4110). Biotinylated primer was prepared by Sigma Genosys. 3 H-UTP was used at 0.6 μCi (0.29 μM total UTP). Reactions were initiated by the addition of enzyme, incubated at 30 0C for 60 mm, and stopped by adding 25 μl of 50 mM EDTA
containing SPA beads (4 μg/μl, Amersham RPNQ 0007). Plates were read on a Packard Top Count NXT after >lhr incubation at room temperature.
Modified HCV NS 5 B RdRp enzyme assay. A modified enzyme assay was performed essentially as described for the standard enzyme assay except for the following: The biotinylated oligo dT12 primer was precaptured on streptavidin- coated SPA beads by mixing primer and beads in assay buffer and incubating at room temperature for one hour. Unbound primer was removed after centrifugation. The primer-bound beads were resuspended in 20 mM Hepes buffer, pH 7.5 and used in the assay at Final concentrations of 20 nM primer and 0.67 μg/μl beads. Order of addition in the assay: enzyme (14 nM) was added to diluted compound followed by the addition of a mixture of template (0.2 nM), 3H-UTP (0.6 μCi, 0.29 μM), and primer-bound beads, to initiate the reaction; concentrations given are final. Reactions were allowed to proceed for 4 hours at 30° C.
IC50 values for compounds were determined using seven different [I]. IC50 values were calculated from the inhibition using the formula y = A+((B- A)/(l+((C/x)ΛD))).
FRET Assay Preparation. To perform the HCV FRET screening assay, 96- well cell culture plates were used. The FRET peptide (Anaspec, Inc.) (Taliani et al., Anal. Biochem. 1996, 240, 60-67) contains a fluorescence donor, EDANS, near one end of the peptide and an acceptor, DABCYL, near the other end. The fluorescence of the peptide is quenched by intermolecular resonance energy transfer (RET) between the donor and the acceptor, but as the NS 3 protease cleaves the peptide the products are released from RET quenching and the fluorescence of the donor becomes apparent. The assay reagent was made as follows: 5X cell Luciferase cell culture lysis reagent from Promega (#E153A) diluted to IX with dH2O? NaCl added to 150 mM final, the FRET peptide diluted to 20 uM final from a 2 mM stock.
To prepare plates, HCV replicon cells, with or without a Renilla luciferase reporter gene, were trypsinized and placed into each well of a 96-well plate with
titrated test compounds added in columns 3 through 12; columns 1 and 2 contained a control compound (HCV protease inhibitor), and the bottom row contained cells without compound. The plates were then placed in a CO2 incubator at 37 0C.
Assays. Subsequent to addition of the test compounds described above
(FRET Assay Preparation), at various times the plate was removed and Alamar blue solution (Trek Diagnostics, #00-100) was added per well as a measure of cellular toxicity. After reading in a Cytoflour 4000 instrument (PE Biosystems), plates were rinsed with PBS and then used for FRET assay by the addition of 30 ul of the FRET peptide assay reagent described above (FRET Assay Preparation) per well. The plate was then placed into the Cytoflour 4000 instrument which had been set to 340 excite/490 emission, automatic mode for 20 cycles and the plate read in a kinetic mode. Typically, the signal to noise using an endpoint analysis after the reads was at least three-fold. Alternatively, after Alamar blue reading, plates were rinsed with PBS, 50 ul of DMEM (high glucose) without phenol red was added and plates were then used for luciferase assay using the Promega Dual-Glo Luciferase Assay System.
Compound analysis was determined by quantification of the relative HCV replicon inhibition and the relative cytotoxicity values. To calculate cytoxicity values, the average Alamar Blue fluorescence signals from the control wells were set as 100% non-toxic. The individual signals in each of the compound test wells were then divided by the average control signal and multiplied by 100% to determine percent cytotoxicity. To calculate the HCV replicon inhibition values, an average background value was obtained from the two wells containing the highest amount of HCV protease inhibitor at the end of the assay period. These numbers were similar to those obtained from naϊve Huh-7 cells.
The background numbers were then subtracted from the average signal obtained from the control wells and this number was used as 100% activity. The individual signals in each of the compound test wells were then divided by the averaged control values after background subtraction and multiplied by 100% to determine percent activity. EC5O values for a protease inhibitor titration were calculated as the concentration which caused a 50% reduction in FRET or luciferase
activity. The two numbers generated for the compound plate, percent cytoxicity and percent activity were used to determine compounds of interest for further analysis.
Representative data for compounds are reported in Table 1.
Table 1.
A>0.5 μM; B 0.02 μM - 0.5 μM; C <0.02 μM but an exact value was not determined; IC50 values were determined using the preincubation protocol. EC50 values were determined using the FRET assay.
Pharmaceutical Compositions and Methods of Treatment
The compounds demonstrate activity against HCV NS 5 B and can be useful in treating HCV and HCV infection. Therefore, another aspect of the invention is a composition comprising a compound of formula I, or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable carrier.
Another aspect of the invention is the use of a compound of formula I in the manufacture of a medicament for the treatment of hepatitis C.
Another aspect of the invention is a composition further comprising a compound having anti-HC V activity.
Another aspect of the invention is a composition where the compound having anti-HCV activity is an interferon. Another aspect of the invention is where the interferon is selected from interferon alpha 2B, pegylated interferon alpha, consensus interferon, interferon alpha 2 A, and lymphoblastoid interferon tau.
Another aspect of the invention is a composition where the compound having anti-HCV activity is a cyclosporin. Another aspect of the invention is where the cyclosporin is cyclosporin A.
Another aspect of the invention is a composition where the compound having anti-HCV activity is selected from the group consisting of interleukin 2, interleukin 6, interleukin 12, a compound that enhances the development of a type 1 helper T cell response, interfering RNA, anti-sense RNA, Imiqimod, ribavirin, an mosine 5L monophospate dehydrogenase inhibitor, amantadine, and rimantadine.
Another aspect of the invention is a composition where the compound having anti-HCV activity is effective to inhibit the function of a target selected from HCV metalloprotease, HCV serine protease, HCV polymerase, HCV helicase, HCV NS4B protein, HCV entry, HCV assembly, HCV egress, HCV NS5A protein, IMPDH, and a nucleoside analog for the treatment of an HCV infection.
Another aspect of the invention is a composition comprising a compound of formula I, or a pharmaceutically acceptable salt thereof, a pharmaceutically acceptable carrier, and an interferon and ribavirin.
Another aspect of the invention is a method of inhibiting the function of the HCV replicon comprising contacting the HCV replicon with a compound of formula I or a pharmaceutically acceptable salt thereof.
Another aspect of the invention, is a method of inhibiting the function of the
HCV NS5B protein comprising contacting the HCV NS5B protein with a compound of formula I or a pharmaceutically acceptable salt thereof.
Another aspect of the invention is a method of treating an HCV infection in a patient comprising administering to the patient a therapeutically effective amount of a compound of formula I or a pharmaceutically acceptable salt thereof. In another embodiment the compound is effective to inhibit the function of the HCV replicon.
In another embodiment the compound is effective to inhibit the function of the HCV NS5B protein.
Another aspect of the invention is a method of treating an HCV infection in a patient comprising administering to the patient a therapeutically effective amount of a compound of formula I, or a pharmaceutically acceptable salt thereof, in conjunction with (prior to, after, or concurrently) another compound having anti-HCV activity.
Another aspect of the invention is the method where the other compound having anti-HCV activity is an interferon.
Another aspect of the invention is the method where the interferon is selected from interferon alpha 2B, pegylated interferon alpha, consensus interferon, interferon alpha 2A, and lymphoblastoid interferon tau.
Another aspect of the invention is the method where the other compound having anti-HCV activity is a cyclosporin.
Another aspect of the invention is the method where the cyclosporin is cyclosporin A.
Another aspect of the invention is the method where the other compound having anti-HCV activity is selected from interleukin 2, interleukin 6, interleukin 12, a compound that enhances the development of a type 1 helper T cell response, interfering RNA, anti-sense RNA, Imiqimod, ribavirin, an inosine S'-monophospate dehydrogenase inhibitor, amantadine, and rimantadine.
Another aspect of the invention is the method where the other compound having anti-HCV activity is effective to inhibit the function of a target selected from the group consisting of HCV metallopro tease, HCV serine protease, HCV polymerase, HCV helicase, HCV NS4B protein, HCV entry, HCV assembly, HCV egress, HCV NS5A protein, IMPDH, and a nucleoside analog for the treatment of an HCV infection.
Another aspect of the invention is the method where the other compound having anti-HCV activity is effective to inhibit the function of target in the HCV life cycle other than the HCV NS5B protein.
"Therapeutically effective" means the amount of agent required to provide a meaningful patient benefit as understood by practitioners in the field of hepatitis and HCV infection.
"Patient" means a person infected with the HCV virus and suitable for therapy as understood by practitioners in the field' of hepatitis and HCV infection.
"Treatment," "therapy," "regimen," "HCV infection," and related terms are used as understood by practitioners in the field of hepatitis and HCV infection.
The compounds of this invention are generally given as pharmaceutical compositions comprised of a therapeutically effective amount of a compound or its pharmaceutically acceptable salt and a pharmaceutically acceptable carrier and may contain conventional excipients. A therapeutically effective amount is that which is needed to provide a meaningful patient benefit. Pharmaceutically acceptable carriers are those conventionally known carriers having acceptable safety profiles.
Compositions encompass all common solid and liquid forms including capsules, tablets, losenges, and powders as well as liquid suspensions} syrups, elixers, and solutions. Compositions are made using common formulation techniques, and conventional excipients (such as binding and wetting agents) and vehicles (such as water and alcohols) are generally used for compositions.
Solid compositions are normally formulated in dosage units and compositions providing from about 1 to 1000 mg of the active ingredient per dose are preferred. Some examples of dosages are 1 mg, 10 mg, 100 mg, 250 mg, 500 mg, and 1000 mg. Generally, other agents will be present in a unit range similar to agents of that class used clinically. Typically, this is 0.25-1000 mg/unit.
Liquid compositions are usually in dosage unit ranges. Generally, the liquid composition will be in a unit dosage range of 1-100 mg/mL. Some examples of
dosages are 1 mg/mL, 10 mg/mL, 25 mg/mL, 50 mg/mL, and 100 mg/mL. Generally, other agents will be present in a unit range similar to agents of that class used clinically. Typically, this is 1-100 mg/mL.
The invention encompasses all conventional modes of administration; oral and parenteral methods are preferred. Generally, the dosing regimen will be similar to other agents used clinically. Typically, the daily dose will be 1-100 mg/kg body weight daily. Generally, more compound is required orally and less parenterally. The specific dosing regime, however, will be determined by a physician using sound medical judgement.
The invention also encompasses methods where the compound is given in combination therapy. That is, the compound can be used in conjunction with, but separately from, other agents useful in treating hepatitis and HCV infection. In these combination methods, the compound will generally be given in a daily dose of 1-100 mg/kg body weight daily in conjunction with other agents. The other agents generally will be given in the amounts used therapeutically. The specific dosing regime, however, will be determined by a physician using sound medical judgement.
Some examples of compounds suitable for compositions and methods are listed in Table 2.
Table 2.
DESCRIPTION OF SPECIFIC EMBODIMENTS
LCMS data:
Stop time: Gradient time + 1 minute Starting cone: 0% B unless otherwise noted
Eluent A: 5% CH3CN / 95% H2O with 1OmM NH4OAc (for columns A, D , E and F)
10 % MeOH / 90 % H2O with 0.1% TFA (for columns B and C) Eluent B: 95% CH3CN / 5% H2O with 1OmM NH4OAc (for columns A,
D , E and F)
90 % MeOH / 10 % H2O with 0.1% TFA (for columns B and C)
Column A: Phenomenex 1 Oμ 4.6 x 50 mm Cl 8 Column B: Phenomenex C18 10 μ 3.O x 50 mm
Column C: Phenomenex 4.6 x 50 mm Cl 8 10 μ Column D: Phenomenex Lina C18 5 μ 3.0 x 50 mm Column E: Phenomenex 5μ 4.6 x 50 mm C 18 Column F: Phenomenex 10μ C18 4.6 x 30 mm
Preparative HPLC data:
Gradient: Linear over 20 min. unless otherwise noted Starting cone: 15% B unless otherwise noted Ending cone: 100% B Eluent A: 5% CH3CN / 95% H2O with 1 OmM NH4OAc
Eluent B : 95% CH3CN / 5% H2O with 1 OmM NH4OAc Column: Sunfire Prep Ci8 OBD 5μ 30 x 100 mm
The preparation of the following starting materials can be found in US 2007060565. 1) 10-(l , 1 -dimethylethyl)-6-methyl- 13-cyclohexyl-3-(methyloxy)-5H-indolo[2, 1 - α] [2]benzazepine-6, 10-dicarboxylate
2) 7i7-Indolo[2,l-α][2]benzazepine-6-carboxylic acid, 13-cyclohexyH0- [[[(dimemylamino)sulfonyl]ammo]carbonyl]-3-methoxy-, methyl ester
The preparation of the following starting materials can be found in WO 2007033175.
3) 7H-Indolo[2,l-α][2]benzazepine-6-carboxylic acid, 13-cyclohexyl-10- [[[(dimethylamino)sulfonyl]amino]carbonyl]-3-methoxy-, carboxylic acid
The preparation of the following starting materials can be found in US 2006166964.
4) 13-cyclohexyl-N-((dimethylamino)sulfonyl)-6-(((2lS,6ii)"2J6-dimethyl-4- morpholinyl)carbonyl)-3-(rnethyloxy)-6,7-dihydro-7H-indolo[2,l-a][2]benzazepine- 10-carboxamide
Intermediate 1
W-(IJ -Dimethylethyl) 6-methyl me- (5 R, 6S)~13 -cyclohexyl-5, 6~dihydroxy- J- (methyloxy)-6t7-dihydro-5H~indolo[2,l~aJ[2]ben∑azepine-6,10-dicarboxylate. To a slurry of 10-(l ,l-dimethylethyl)-6-methyl-13-cyclohexyl-3-(methyloxy)-7H- indolo[2,l-fi!][2]benzazepine-6,10-dicarboxylate (400 mg, 0.80 mmol) and 4- methylmorpholine iV-oxide (234 mg, 2.0 mmol) in TΗF (5 mL) was added H2O (0.20 mL) and OsO4 (0.20 mL of a 2.5% w/w solution of OsO4 in t-BuOH). The reaction was stirred at rt for 2h, quenched with sat Na2S2O3 (aq.) (~5 mL) and stirred Ih. The layers were separated, and the aqueous layer was extracted with THF (2 x 5 mL). The combined organics were concentrated and the residue was dissolved into DMF (2 mL) and treated with H2O (~4 mL). The solids were collected by filtration to yield 10-(l,l-dimethylethyl) 6-methyl rαc-(5J?,65)-13-cyclohexyl-5,6~dihydroxy-3- (methyloxy)-6,7-dihydro-5H-indolo[2, 1 -α][2]benzazepine-6,10-dicarboxylate (413 mg, 0.77 mmol, 96%) as a yellow solid which was used without further purification. 1HNMR (SOO MHz, CD3OD) δ 1.22 - 2.19 (m, 10H), 1.65 (s, 9H), 2.87 - 3.12 (m, 2H), 3.53 (d, J= 15.0 Hz, IH)5 3.68 (s, 3H), 3.93 (s, 3H)5 4.63 (d, J- 15.0 Hz5 IH)5 7.05 (dd, J= 8.4, 2.9 Hz5 IH)5 7.36 - 7.43 (m, 2H)5 7.65 (dd, J- 8.4, 1.1 Hz, IH),
7.84 (d, J= 8.4 Hz, IH), 7.91 (br s, IH). LCMS: m/e 536 (M+H)+ } ret time 3.11 min, column D, 4 minute gradient.
Intermediate 2
7- (1, 1 -Dimethylethyl) 3a-methyl rac~(3aR, 14bS)-l 0-cyc!ohexyl~2, 2-dimethyl- 13-(methyloxy)-4H-[l, 3]dioxolo[4, 5-d]indolo[2, l-a] [2]benzazepine-3a, 7(14bH)- dicar boxy late. To a solution of 10-(l,l -dimethylethyl) 6-methyl rac-(5R,6S)-l$- cyclohexyl-5,6-dihydroxy-3-(methyloxy)-6,7-dihydro-5H-indolo[2,l- α][2]benzazepine-6,10-dicarboxylate (30 mg, 0.056 mmol) in THF (1 mL) was added 2-methoxypropene (0.2 mL) and then TsOH monohydrate (5 mg). The reaction mixture was stirred overnight and then concentrated to dryness. The residue was dissolved into DMSO/MeOH and purified by preparative HPLC to yield 7-(l,l- dimethylethyl) 3a-methyl rαc-(3aJ?;14b5)-10-cyclohexyl-2,2-dimethyl-13- (methyloxy)-4H-[ 1 »3]dioxolo[4,5-d]indolo[2, 1 -a] [2]benzazepine-3a,7(l 4hH)- dicarboxylate (17 mg, 0.030 mmol, 53%) as a yellow solid. 1HNMR (300 MHz, CDCl3) δ 0.32 (s, 3H)5 0.80 - 2.16 (m, 10H), 1.33 (s, 3H), 1.60 (s, 9H), 2.83 - 2.95 (m, IH), 3.85 (s, 3H), 3.87 (s, 3H), 4.00 (d, 7= 14.8 Hz; IH), 4.46 (U1 J= 14.8 Hz, IH), 5.21 (s, IH), 7.00 (d, J= 2.6 Hz, IH), 7.04 (dd, J= 8.4, 2.6 Hz, IH), 7.40 (d, J= 8.4 Hz, IH), 7.67 (dd, J- 8.4, 1.1 Hz, IH), 7.77 (d, J= 8.4 Hz, IH), 7.98 (br s, IH). LCMS: m/e 576 (M+H)+, ret time 4.28 min, column A, 4 minute gradient.
Intermediate 3
Methyl rac-(5R, 6S)-13-cyclohexyl~ 10-
((((dimethylamino)sulfonyl)amino)carbonyl)-5, 6-dihydroxy-3-(methyloxy) -6, 7- dihydro-5H-indolo[2,l-a][2Jbenzazepine-6~carboxylate. To a solution oil H- indolo[2> 1 -a] [2]benzazepine-6-carboxylic acid, 13-cyclohexyl-l 0- [[[(dimethylamino)sulfonyl]amino]carbonyl]-3-methoxy-, methyl ester (70 mg, 0.13 mmol) and 4-methylmorpholine jV-oxide (37 mg, 0.32 mmol) in THF (1 mL) was added H2O (0.10 rnL) and OsO4 (0.10 mL of a 2.5% w/w solution of OsO4 in t- BuOH). The reaction was stirred at it for 2h, quenched with sat. Na2S2O3 (aq.) (~1.5 mL) and stirred Ih. The layers were separated, and the aqueous layer was extracted with THF (2 x 2 mL). The combined organics were concentrated and the residue was dissolved into DMF/MeOH (1 :2, 3 mL), filtered and purified by preparative HPLC to yield methyl rac-(5Rt6S)- 13-cyclohexyl-l 0-
((((dimethylamino)sulfonyl)amino)carbonyl)-5,6-dihydroxy-3-(methyloxy)-6,7- dihydro-5H-indolo[2>l-α][2]benzazepine-6-carboxylate (62 mg, 0,11 mmol, 83%) as a light yellow solid. 1HNMR (300 MHz, d6~DMSO) δ 1.07 - 2.10 (m, 10H), 2.80 - 2.92 (m, IH), 2.90 (s, 6H), 3.31 - 3.39 (m, IH), 3.57 (s, 3H), 3.86 (s, 3H), 4.65 - 4.74 (m, 2H), 5.56 - 5.60 (m, IH), 5.74 - 5.80 (m, IH), 7.07 (dd, J- 8.4, 2.9 Hz, IH), 7.26 (d, J= 2.9 Hz, IH), 7.36 (d, J= 8.4 Hz, IH), 7.63 (dd, J- 8.4, 1.3 Hz, IH), 7.87 (d, J = 8.4 Hz, IH), 8.36 (br s, IH), 11.38 (s, IH). LCMS: m/e 584 (M-H)", ret time 1.86 min, column A, 4 minute gradient.
Intermediate 4
rac- (5 R, 6S)- 13- Cy c lohexyl-10- ((((dimethylamino)sulfonyl) amino) car 'bonyl) -
5, 6-dϊhydroxy~3-(methyloxy)-6, 7-dihydro-5H-indolo[2, 1-a] [2]benzazepine-6- carboxylic acid. To a solution of methyl rac~(5R,6S)-l 3-cyclohexyl-l 0- ((((dimethylamino)sulfonyl)amino)carbonyl)-5,6-dihydroxy-3-(methyloxy)-6,7- dihydro-5H-indolo[2,l-α][2]benzazeρine-6-carboxylate (57 mg, 0.10 mmol) in
MeOH/THF (1:1, 2 mL) was added IM NaOH aq. (0.5 mL). The reaction was sealed and heated at 80° C for 20 mm with microwave irradiation. The reaction was quenched with IN HCl aq. (0.5 mL), diluted with H2O and concentrated to remove the organic solvents. The resulting precipitates were collected by filtration and dried under vacuum to yield rac-(5R,6S)- 13-cyclohexyl- 10-
((((dimethylamino)sulfonyl)amino)carbonyl)-5,6-dihydroxy-3-(methyloxy)-6,7- dihydro-5J-/-indolo[2,l-α][2]benzazepine~6~carboxylic acid (42 mg, 0.074 mmol, 73%) as a yellow solid. 1HNMR (300 MHz, CD3OD) δ 0.73 - 2.20 (m, 10H)5 2.92 - 3.05 (m, IH), 3.02 (s, 6H), 3.54 (d, J- 14.8 Hz, IH), 3.93 (s, 3H)9 4.71 (d, J = 14.8 Hz, IH), 4.94 (s, IH), 7.05 (dd, J= 8.4, 2.6 Hz, IH), 7.40 (d, J = 2.6 Hz, IH), 7.40 (d, J= 8.4 Hz, IH), 7.59 (dd, J= 8.4, 1.5 Hz, IH), 7.89 (d, J= 8.4 Hz, IH), 8.05 (d, J = 1.5 Hz, IH). LCMS: m/e 572 (M+H)" , ret time 3.34 min, column B5 4 minute gradient.
Intermediate 5
rac-(5R, 6S)-I S-Cy clohexyl-N-((dimethylamino)sulfonyl)~6-(((2S, 6R)~2, 6- dimethyl~4~morpholinyl)carbonyl)-5,6-dihydroxy-3-(methyloxy)-6,7-dihydro-5H- indolo[2,l-a][2]benzazepine-10-carboxamide. To a solution of 13-cyclohexyl-iV- ((dimethylamino)sulfonyl)-6-(((25',6i?)-2}6-dimethyl-4-morpholinyl)carbonyl)-3- (methyloxy)-6,7-dihydro-7H-indolo[2,l-α][2]benzazepine-10-carboxamide (500 mg, 0.79 mmol) and 4-methylmorpholine TV-oxide (231 mg, 1.97 mmol) in TΗF/Η2O (10:1, 5.5 mL) was added OsO4 (0.50 mL of a 2.5% w/w solution of OsO4 in t- BuOH, 0.04 mmol). The reaction was stirred at rt for 18h, quenched with sat.
Na2S2O3 (aq.) (~10 mL) and stirred 6h. The layers were separated, and the aqueous layer was extracted with THF (2 x 20 mL). The combined organics were washed with sat. Na2S2O3 (aq.) (-30 mL) and brine (30 mL) and concentrated. The residue
was dissolved into DMF/MeOH (1 :2, 15 raL), filtered and purified by preparative HPLC to yield rac<5i?,6^-13-cyclohexyl-N-((dimethyIainino)sulfonyl)-6-(((25',6-5-)-
2,6-dimethyl~4-morpholinyl)carbonyl)-5J6-dihydroxy-3-(methyloxy)-6,7-dihydro- 5H-indolo[2,l-α][2]benzazepine-10-carboxamide (230 mg, 0.34 mmol, 44%) as an orange-yellow solid. 1HNMR (300 MHz, CDCl3) δ 0.99 - 2.02 (m, 20H)5 2.83 - 2.96 (m, IH)5 3.02 (s, 6H), 3.63 - 3.73 (m, 2H), 3.89 (s, 3H), 4.20 - 4.38 (m, IH), 4,60 - 4.71 (m, IH), 5.14 - 5.26 (m, IH), 7.04 (dd, J- 8.4, 2.6 Hz, IH), 7.38 (d, J= 8.4 Hz, IH), 7.45 (br s, IH), 7.55 (d, J= 8.4 Hz5 IH), 7.79 - 7.97 (m, 2H). LCMS: ro/e 667 (M-H)", ret time 1.98 min, column A, 4 minute gradient.
Intermediate 6
13-Cyclohexyl-ftr -(2~(dimethylamino)ethyl)-N -((dimethylamino)sulfonyl)-b ' f-m ethyl-3- (methyloxy) - 7H- indolo[2, 1 -a] [2] benzazepine- 6, 10~dicarboxamide. IH- Indolo[2,l-α][2]benzazepine-6-carboxylic acid, 13-cyclohexyl-10- [[[(dimethylamino)sulfonyl]amino]carbonyl]-3-methoxy-, methyl ester (700 mg, 1.27 mmol) was dissolved into MeOH//THF (1:1 , 14 rnL) and treated with 1 M aqueous NaOH (3 mL). The reaction mixture was stirred and heated at 80 0C with microwave irradiation for 15 min and cooled to it The clear solution was neutralized with IM aqueous HCl (3 mL) and concentrated to remove organic solvents. The residue was stirred with H2O (10 mL) for Ih and the resultant solids were collected by filtration, washed with H2O and dried under vacuum. To a solution of these solids, NX,NX,N2~ trimethylethane-l,2-diamine (191 mg, 1.88 mmol) and triethylamine (0.700 mL) in DMF (5 mL) was added HATU (620 mg, 1.63 mmol). The reaction mixture was stirred at rt for Ih, diluted with H2O (25 mL) and IM HCl (aq.) (5 mL) and stirred 20 min. The precipitates were collected by filtration, rinsed with H2O and dried to yield impure product (960 mg) as a yellow powder. A crude sample (100 mg) of the
impure product was dissolved into MeOH/DMF (3:1, 4 mL), filtered and purified by preparative HPLC (H2CVCH3CN with 1OmM NH4OAc buffer) to yield 13- cyclohexyl~Λ^-(2-(dimethylamino)ethyl) -N1 °-((dimethylamino) sulfonyl)-3 -methoxy- A^-methyl-7i/-indolo[2,l-a][2]benzazepine-6,10-dicarboxamide (78 mg, 0.13 mmol, 95%) as a yellow solid. 1HNMR (300 MHz, CD3OD) δ 1.11 - 3.07 (m, 24H), 2.99 (s, 6H), 3.50 - 3.76 (m, 2H), 3.93 (s, 3H), 4.27 - 4.44 (m, IH), 5.05 - 5.25 (m, IH), 7.05 (s, IH) 7.08 (d, J= 2.6 Hz, IH), 7.16 (dd, J= 8.8, 2.6 Hz, IH), 7.56 (d, J= 8.4 Hz, IH), 7.64 (dd, J- 8.8, 1.5 Hz, IH), 7.88 (d, J- 8.4 Hz, IH), 8.16 (br s, IH). LCMS: m/e 620 (M-H)", ret time 2.32 min, column A, 4 minute gradient.
Intermediate 7 Diol, sulfamide, amide intermediate
rac-(5R, 6S)-13-Cyclohexyl~N6-(2-(dimethylamino)ethyl)-N!0-
((dimethylam ino)sulfonyl) -5, 6-dihydroxy-N6 -methyl- 3 - (methyloxy) - 6, 7-dihydro-5H- indolo[2, 1-a] [2]benzazepine-6, 10-dicarboxamide. To a solution of 13-cyclohexyl~ N6 -(2- (dimethylamino) ethyl)-7V10-((dimethyl amino)sulfonyl)-3 -methoxy-Λ^-methyl- 7i/-indolo[2,l-β][2]benzazepine-6, 10-dicarboxamide (200 mg, 0.32 mmol) and 4- methylmorpholine JV-oxide (94 mg, 0.81 mmol) in THF/H2O (10:1, 3.3 mL) was added OsO4 (0.15 mL of a 2.5% w/w solution of OsO4 in /-BuOH, 0.014 mmol). The reaction was stirred at rt for 2h, additional OsO4 (0.15 mL of a 2.5% w/w solution of OsO4 in f-BuOH, 0.014 mmol) was added and the reaction was allowed to stir atrt overnight. The reaction mixture was quenched with sat. Na2S2O3 (aq.) (~5 mL) and stirred Ih. The layers were separated, and the aqueous layer was extracted with THF (2 x 4 mL). The combined organics were concentrated, slurried with water and the solids were collected by filtration to yield rαc-(5i?,6.S)-13-cyclohexyl-7Λ'6-(2- (dimethylamino)ethyl)-7Y10-((dimethylamino)sulfonyl)-5J6-dihydroxy-Λ'<5-methyl-3-
(memyloxy)-6,7-dihydro-5H-indolo[2, 1 -a] [2]benzazepine-6, 1 O-dicarboxamide (60 mg, 0.091 mmol, 28%) as a yellow solid, which was used without further purification. LCMS: m/e 654 (M-H)", ret time 2.09 min, column A, 4 minute gradient,
Intermediate 8
7H-Indolo[2, 1 -a] [2] benzazepin e- 10-carboxamide, 13-cyclohexyl-N- [(dimethylamino)sulfonyl]-3-methoxy-6~[(3~methyl-3,8-diazabicyclo[3.2.I]oct-8- yl)carbonyl] . To a stirred solution of 13-cycloheκyl~Λr-[(dimethylamino)sulfonyl]-3- methoxy-7H-indolo[2,l-α][2]ben2azepine-10-carboxamide-6-carboxylic acid (51 mg, 0.095 mmol), 3-methyl-3,8-diazabicyclo[3.2.1]octane dihydrochloride (34 mg, 0.17 mmol) and triethylamine (0.06 mL) in DMF (1.0 mL) was added HATU (50 mg, 0.13 mmol). The reaction mixture was stirred at rt for 2h, diluted with MeOH (-ImL), filtered and purified by preparative HPLC (CH3CN/H2O with 1 OmM NH4OAc) to yield 7H-indolo[2,l-α][2]benzazepine-10~carboxamide, 13-cyclohexyl-iV- [(dimethylamino)sulfonyl]-3-methoxy-6-[(3-methyl-3,8-diazabicyclo[3.2.1 ]oct-8- yl)carbonyl] (52 mg, 0.08 mmol, 85%) as a yellow solid. 1HNMR (300 MHz, CDCl3) δ 8.31 (s, IH)1 7.83 (d, J= 8.4 Hz, IH), 7.59 (br d, J= 8.4 Hz, IH), 7.45 (d, J = 8.8 Hz, IH), 7.02 (dd, J- 8.8, 2.6 Hz, IH), 6.91 - 6.86 (m, 2H), 5.35 - 5.16 (m, IH), 4.34 - 4.16 (m, IH), 3,87 (s, 3H), 3.01 (s, 6H), 2.85 - 1.03 (m, 24H). LCMS: m/e 644 (M-H)", ret time 2.89 min, column A5 4 minute gradient.
Intermediate 9
rac- (5R, 6S)-13-Cyclohexyl~N~((dimethylamino)sulfonyl)~6- (β-methyl-3, 8- diazabicyclo[3.2. l]oct-8-yl)carbonyl)~5, 6-dihydroxy~3-(methyloxy)~6, 7~dihydro~5H- indolo[2, l-aj[2]benzazepine-10-carboxamid. To a solution of 7H-indolo[2, 1 - β][2]benzazepme-l O-carboxamide, 13-cyciohexyl-ΛL[(dirnethylamino)sulfonyl]-3- methoxy-6-[(3-methyl-3,8-diazabicyclo[3.2.1]oct-8-yl)carbonyl] (303 mg, 0.47 mmol) and.4-methylmorpholine JV-oxide (138 mg, 1.2 mmol) in THF/H2O (10:1, 4.4 niL) was added OsO4 (0.45 mL of a 2.5% w/w solution of OsO4 in /-BuOH, 0.04 mmol). The reaction was stirred at rt for 2d, quenched with IM Na2S2O3 (aq.) (5 mL) and stirred 2h. The solution was extracted with EtOAc (10 mL and then 5 mL). The combined organics were washed with IM Na2S2O3 (aq.) concentrated and purified by preparative HPLC (CH3CN/H2O with 1OmM NH4OAc) to yield rac- (5JR,65)-13-cyclohexyl-N-((dimethylamino)sulfonyl)-6-((3-methyl-3,8- diazabicyclo[3.2.1 Joct-S-y^carbonylJ-S^-dihydroxy-S-fmethyloxy^βjy-dihydro-SiY- indolo^l-^^benzazepine-lO-carboxamide (57 mg, 0.08 mmol, 18%) as a yellow solid, which was used without further purification. LCMS: m/e 680 (M+H)+, ret time 1.66 min, column C, 2 minute gradient.
Example 1
rac-βaRMbSyiO-Cyclohexyl-N^-p-fdimethylaminoJethyty-N7- ((dimethylamino)sulfonyl)-Nia '',2,2-trimethyl-l ' 3~(methyloxy)-4H-[l ,3j 'dioxolo[4,5- d]indolo[2,l~a][2]benzazepine~3a, 7(14bH)~dicarboxamide. 2-Methoxypropene (0.1 mL, 1.0 mmol) was added to a slurry of rac-(5i?,65)-13-cyclohexyl-N°-(2- (dimethylamino)ethyl)-Λfl0-((dimethylamino)sulfonyl)~5,6~dihydroxy-iV6-methyl-3- (methyloxy)-6,7-dihydro-5H-indolo[2, 1 -a] [2]benzazepine-6, 10-dicarboxamide (30 mg, 0.045 mmol) in DCE (1 mL). /?-TsOH monohydrate (1 mg, 0.005 mmol) was added and the reaction was stirred at rt overnight. Methylene choride (1 mL) and
additional /?-TsOH monohydrate (10 mg, 0.05 mmol) were added and the reaction was stirred 2h. The reaction was neutralized with IN NaOH (aq) (1 niL) and the layers were separated. The organic layer was washed with brine, concentrated and purified by prep HPLC (CH3CN/H2O with 10 nM NH4OAc) to yield rac-(3aJU4b£> 10-cyclohexyl-N3a-(2-(dimethylamino)ethyl)~N7-((dimethylamino)sulfonyl)-N3a,2,2- trimethyl- 13~(methyloxy)-4iϊ~[ 1 ,3]dioxolo[4,5-</]mdolo[2, 1 -α][2]benzazepine- 3a,7(14bH)-dicarboxamide (16.7 mg, 0.024 mmol, 50%) as an off-white solid. 1HNMR (300 MHz5 CD3OD) δ 0.31 (s, 3H), 1.20 - 2.20 (m, 13H), 2.54 (s, 3H), 2.58 (s, 3H), 2.97 (s, 6H), 2.72 - 3.11 (m, 5H), 3.50 - 3.89 (m, 4H), 3.94 (s, 3H), 4.40 - 4.63 (m, IH), 5.47 - 5.52 (m, IH), 7.10 - 7.17 (m, IH), 7.21 - 7.27 (m, IH), 7.33 - 7.47 (m, H), 7.61 - 7.67 (m, IH), 7.76 - 7.86 (m, IH), 8.03 - 8.09 (m, IH). LCMS: m/e 696 (M+H)+, ret time 3.19 min, column B, 4 minute gradient.
Example 2
rac- (3aR, 14bS) -10- Cyclohexyl-N- ((dimethylamino)sulfonyl) -3 a- (((2R, 6S) -2, 6~ dimethyl~4-morpholinyl)carbonyl)-l 3-(methyloxy)-2-oxo-3a, 14b-dihydro-4H- [J ,3] dioxolo[4,5-d] indolo[2, 1 -a] [2] benzazepine-7 -carboxamide. A solution of rac- (5i?,65)-13-cyclohexyl-iV-((dimethylamino)sulfonyl)-6-(((25}6JR)-256-dimethyl-4- morpholinyl)carbonyl)-5,6-dihydroxy-3-(rnethyloxy)-6}7-dihydro-5H-indolo[2,l- α][2]benzazepine~10~carboxamide (35 mg, 0.052 mmol) and 1,1 '- carbonyldiimidazole (58 mg, 0.36 mmol) in THF (2 mL) was sealed into a reaction vessel and heated at 75 0C with microwave irradiation for 20 min. (~ 50% conversion). Heating was continued at 80 0C for 40 min (-80% conversion). The reaction was cooled to rt, concentrated to dryness, dissolved into MeOH (~2 mL), filtered and purified by preparative HPLC (CH3CN/H2O with 1OmM NH4OAc) to yield mc-(3aR, HbS)-10-cyclohexyl-iV-((dimethylamino)sulfonyl)-3a-(((2i?,65)-2,6-
dimethyl-4-moφholinyl)carbonyl)-13-(methyloxy)-2-oxo-3a,14b-dihydro-4/3T- [l,3]dioxolo[4,5-rf]indolo[2)l-fl][2]benzazepine-7-carboxamide (20.6 nig, 0.030, 57%) as a white powder. 1HNMR (300 MHz, CDCl3) 6 1.04 - 2.1 1 (m, 16H), 2.41 - 2.55 (m, IH), 2.80 - 2.95 (m, IH)5 3.02 (s, 6H)5 3.02 - 3.13 (m, IH), 3.48 - 3.82 (m, 2H)5 3.90 (s, 3H)5 4.05 - 4.26 (m, IH), 4.32 - 4.59 (m, 3H)5 5.94 (d, J- 14.3 Hz, IH), 7.11 (br d, J- 8.4 Hz, IH), 7.20 (d, J= 2.2 Hz, IH), 7.30 - 7.39 (m, IH), 7.43 (d, J= 8.4 Hz, IH), 7.78 - 7.91 (m, 2H). LCMS: m/e 693 (M-H)", ret time 2.77 min} column A, 4 minute gradient.
Example 3
rac-(3aRJ4bS)-10~Cyclohexyl-N-((dimethylamino)sulfonyl)-3a-(((2R, 6S)-2, 6- dimethyl-4-morpholinyl)carbonyl)-2,2~dimethyl~l 3-(methyloxy)~3a, 14b-dihydro-4H- [l,3]dioxolo[4,5-d]indolo[2,l-a][2]benzazepine-7-carboxamide. To a solution of rac~(5i?J61S)-13-cyclohexyl-N-((dimethylamino)sulfonyl)-6-(((25',6ii)-256-dimethyl-4- morpholinyl)carbonyl)-5,6-dihydroxy-3-(methyloxy)-6,7-dihydro-5/f-indolo[2Jl- α][2]benzazepine-10-carboxamide (60 mg, 0.090 mmoi) in CH2Cl2 (3 mL) was added 2-methoxypropene (0.5 mL, 5.2 mmol) and TsOH-H2O (50 mg. 0.26 mmol). The reaction solution was stirred at it for 2h, concentrated to dryness, dissolved into MeOH, filtered thtrough an SPE column (Cl 8, 500 mg, MeOH)5 concentrated and purified by preparative HPLC (CH3CN/H2O with 1OmM NH4OAc) to yield rαc- (3ai?,14b5)-10-cyclohexyl-N-((dimethylamino)sulforιyl)-3a-(((2/?965)-2s6-dimethyl- 4-morpholinyl) carbonyl) -2 , 2- dimethyl- 13 -(methyloxy) -3a 514b-dihydro-4H- [l,3]dioxolo[4,5-d]indolo[2,l-α]t2]benzazepine-7-carboxamide (15.5 mg, 0,022,
24%) as a light yellow solid. 1HNMR (300 MHz, CDCl3) 5 0.28 (s, 3H)9 0.88 - 2.12 (m, 19H), 2.36 - 2.49 (m, IH), 2.85 - 3.01 (m, 2H), 3.03 (s, 6H)5 3.48 - 3.80 (m, 2H)5 3.88 (s, 3H), 3.89 - 4.04 (m, IH), 4.22 - 4.50 (m, 2H), 4.76 - 4.96 (m, IH)5 5.52 - 5.59
(m, IH), 7.01 (dd, J= 8.4, 2.6 Hz, IH), 7.20 - 7.33 (m, 2H), 7.37 (d, J= 8.4 Hz, IH), 7.78 - 7.91 (m, 2H). LCMS: m/e 707 (M-H); ret time 3.26 min, column A, 4 minute gradient.
Example 4
raC'(3aRJ4bS)-10-Cyclohexyl-N-((dimethylamino)sulfonyl)-3a-((3-methyl- 3, 8-diazabicyclo[3.2.1] oct-8-yl)carbonyl)-l 3-(τnethyloxy)-2-oxo-3a,14b-dihydro-4H- [l,3]dioxolo[4,5-d]indolo[2,l-a] [2]benzazepine-7-carboxamid. A solution of rac- (5R,6S)- 13-cyclohexyl-N-((dimethylamino)sulfonyl)-6-((3-methyl-3 ,8- diazabicyclo[3.2.1]oct-8~yl)carbonyl)-5,6-dihydroxy-3-(methyloxy)-6,7-dihydro-5if- indolo[2,l-a][2]benzazepme-10-carboxamide (31 mg, 0.045 mmol) and 1,1 '- carbonyldiimidazole (120 mg, 0.74 mmol) in TEA (0.1 mL) and THF (1 mL) was sealed into a reaction vessel and heated at 90 0C with microwave irradiation for 2h. The reaction was cooled to rt, concentrated to dryness, dissolved into MeOH, filtered and purified by preparative HPLC (CH3CN/H2O with 1 OmM NH4OAc). The material containing the desired product was repurified by preparative HPLC (MeOH/H2O with 1OmM TFA) to yield rαc-(3ai?,14b5)-10-cyclohexyl-N- ((dimethylamino)sulfonyl)-3a-((3 -methyl- 3 ,8-diazabicyclo[3.2.1 ]oct-8-yl)carbonyl)- 13-(methyloxy)-2-oxo-3a,14b-dihydro-4H-[l,3]dioxolo[4,5-^indolo[2,l- <2][2]benzazepine-7-carboxamide (9.5 mg, 0.013 mmol, 30%) as a white solid. 1HNMR (300 MHz, CD3OD) 6 1.20 - 2.33 (m, 14H), 2.87 - 3.02 (m, 5H), 3.04 (s, 6H), 3.35 - 4.52 (m, 3H), 3.96 (s, 3H), 4.23 (br d, J= 14.6, IH), 4.75 (br d> J= 14.6, IH), 4.95 (br s, IH), 5.16 (br s, IH), 6.11 (br s> IH), 7.26 - 7.32 (m, 2H), 7.55 (d, J- 8.8 Hz, IH), 7.63 (dd, J= 8.4, 1.5 Hz, IH), 7.94 (d, J= 8.4 Hz, IH), 7.99 (br s, IH). LCMS: m/e 706 (M+H)+, ret time 1.56 min, column C, 2 minute gradient.
Example 5
rac- (3 aR, 14bS) - 10-Cyclo hexyl-N~((dimethylam ino)sulfonyl)~2, 2-dimethyl-3 a~ ((3-methyl-3,8-diazabicyclo[3.2. I] oct-8-yl)carbonyl)- 13-(methyloxy)-3a, 14b- dihydro-4H-[l, 3]dioxolo[4, 5-d]indolo[2, 1 -a] [2] ' benzazepine- 7~carboxamid. To a solution of rac~(5R,6S)-l 3-cyclohex.yl-iV~((dimethylamino)sulfonyl)-6-((3-methyl- 3,8-diazabicyclo[3.2.1]oct-8-yl)carbonyl)-5,6-dihydroxy-3-(methyloxy)-6;i7-dihydro- 5H-indolo[2}l-α][2]benzazepine-i0-carboxarmde (42 mg, 0,062 mmol) and 2- methoxypropene (0.5 mL, 5.2 mmol) in CH2Cl2 (0.5 mL) was added and TsOH H2O (5 mg. 0.026 mmol). The reaction solution was stirred at rt overnight, concentrated to dryness, dissolved into MeOH, filtered, and purified by preparative HPLC (CH3CN/H2O with 1OmM NH4OAc) to yield rac-(3ai?,14b5)-10-cyclohexyl-iV- ((dimethylamino)sulfonyl)-2s2-dimethyl-3a-((3-methyl-3,8-diazabicyclo[3.2.1 ]oct-8- yl)carbonyl)-13-(methyloxy)-3a,14b-dihydro-4H'-[l,3]dioxolo[4,5-<]mdolo[2,l- α][2]benzazepine-7-carboxamide (6.7 mg, 0.1 mmol, 15%) as an off-white solid. 5HNMR (SOO MHz5 CD3OD) δ 0.33 (s, 3H), 1.19 - 2.54 (m, 22H), 2.65 - 2.78 (m, 0.5H), 2.90 - 3.02 (m, 2H), 3.03 (s, 6H), 3.16 - 3.28 (m, 0.5H), 3.91 (ά, J= 15.0 Hz, 0.5H), 3.94 (s, 3H), 4.05 (d, J= 15.0 Hz, 0.5H), 4.34 (d, J= 15.0 Hz, 0.5H), 4.58 (d, J= 15.0 Hz, 0.5H), 4.66 - 4.74 (m, IH), 5.15 - 5.22 (m, 0.5H), 5.45 - 5.59 (m, 1.5H), 7.15 (dd, J= 8.4, 2.6 Hz, IH), 7.22 - 7.29 (m, IH), 7.45 (dd, J= 8.4 Hz5 IH), 7.59 (dd, J- δ.4} 1.8 Hz, IH), 7.86 - 7.93 (m, 2H). LCMS: m/e 718 (M-H)", ret time 1.60 min, column F, 2 minute gradient.
Example 6
rac-(3aRJ4bS)-10-Cyclohexyl-N-((dimethylamino)sulfonyl)-3a-((3~methyl- 5, 8-diazabicyclo[3.2. lJoct-8-yl) carbonyl) - 13-(methyloxy)-3a, J 4b-dihydro~4H~ [I13]dioxolo[4, 5-d]indolo[2, 1 -a] [2] ' benzazepine- 7-carboxamid. To a solution of rac-(5R ,6S) - 13 -cyclohexyl-iV-((dimethylamino)sulfonyl)-6 -((3 -methyl-3 , 8 - diazabicyclo[3.2.1]oct-8-yl)carbonyl)-5,6-dihydroxy-3-(methyloxy)-6f7-dihydro-5if- indolo[2,l-α][2]benzazeρine-10-carboxamide (47 mg, 0.069 mmol) in CH2Cl2 (1 mL) and CH2Br2 (1 mL) was added nBu4N+I" (16 mg. 0.043 mmol) and 5.5N NaOH (aq) (0.6 mL). The reaction solution was stirred at rt overnight, concentrated to remove CH2Cl2, diluted with CH2Br2 (1 mL) and stirred at 50 0C in a sealed vessel overnight. The crude reaction mixture was concentrated to dryness and purified by preparative HPLC (MeOH/H2O with 1OmM TFA) to yield rαc-(3aR,l 4bS)-l O-cyclohexyl-JV- ((dimethylamino)sulfonyl)-3a-((3-methyl-3,8-diazabicyclo[3.2.1 ]oct-8-yi)carbonyl)- 13-(methyloxy)-3a, 14b-dihydro-4H-[ 1 ,3]dioxolo[4,5-£fjindolo[2J -α][2]benzazepine- 7-carboxamide (14.5 mg, 0.21 mmol, 30%) as a bright yellow solid. 1HNMR (300 MHz, CD3OD) δ 1.21 - 2.39 (m, 16H), 2.74, (s, 3H), 2.84 - 2.97 (m, 2H)9 3.02 (s, 6H), 3.44 - 3.54 (m, IH), 3.87 (d, J= 15.0, IH), 3.95 (s, 3H), 4.08 - 4.27 (m, 2H), 5.23 - 5.29 (m, 2H), 5.43 - 5.46 (m, IH), 5.93 ( d, J= 7.7 Hz, IH), 7.11 - 7.19 (m,
2H), 7.47 (d, J- 8.1 Hz5 IH), 7.58 (dd, J= 8.4, 1.5 Hz, IH), 7.94 (d, J= 8.4 Hz5 IH), 7.99 (br s, IH). LCMS: m/e 692 (M+H)+, ret time 1.89 min, column C3 2 minute gradient.
It will be evident to one skilled in the art that the present disclosure is not limited to the foregoing illustrative examples, and that it can be embodied in other specific forms without departing from the essential attributes thereof. It is therefore desired that the examples be considered in all respects as illustrative and not
restrictive, reference being made to the appended claims, rather than to the foregoing examples, and all changes which come within the meaning and range of equivalency of the claims are therefore intended to be embraced therein.
Claims (14)
- We claim:1 , A compound of formula Iwhere:R1 is CO2R8 or CONR9R10;R2 is hydrogen, alkyl, aminoalkyl, aikylaminoalkyl, or dialkylaminoalkyl;R3 is hydrogen, alkyl, aminoalkyl, alkylaminoalkyl, or dialkylaminoalkyl;or NR2R3 taken together is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, N- (alkyl)piperazmyl, morpholinyl, thiomorpholinyl, homopiperidinyl, or homomorpholinyl, and is substituted with 0-3 alkyl substituents;or NR2R3 taken together is OrR4 is hydrogen or alkyl;R5 is hydrogen or alkyl;or R4 and R5 taken together is oxo;R6 is hydrogen, halo, alkyl, alkenyl, hydroxy, benzyloxy, or alkoxy; R7 is cycloalkyl;R is hydrogen or alkyl;R9 is hydrogen, alkyl, alkylSO2, cycloalkylSO2, haloalkylSO2, (R1 !)(R12)NSO2j or (R13)SO2;R10 is hydrogen or alkyl;Rπ is hydrogen or alkyl;R12 is hydrogen or alkyl;Rϊ3 is azetidinyl, pyrrolidinyl, piperidinyl, piperazinyl, N-(alkyl)ρiρerazinyl, morpholinyl, thiomorpholinyl, homopiperidinyl, or homomorpholinyl; andR14 is hydrogen, alkyl, cycloalkyl, (cycloalkyl)alkyl, alkylcarbonyl, cycloalkylcarbonyl, haloalkylcarbonyl, alkoxycarbonyl, alkylSO2, cycloalkylSO2, haloalkylSO2, aminocarbonyl, (alkylamino)carbonyl, (dialkylamino)carbonyl, benzyl, benzyloxycarbonyl, or pyridinyl;or a pharmaceutically acceptable salt thereof.
- 2, A compound of claim 1 where R1 is CONR9R10; R2 is dialkylaminoalkyl; R3 is alkyl; or NR2R3 taken together is morpholinyl substituted with 2 alkyl substituentsor NR2R3 taken together is ~~" ; R4 is hydrogen or alkyl; R5 is hydrogen or alkyl; or R4 and R5 taken together is oxo; R6 is alkoxy; R7 is cycloalkyl; R9 is (R11XR^)NSO2; R11 is alkyl; R12 is alkyl; and R14 is alkyl; or a pharmaceutically acceptable salt thereof.
- 3. A compound of claim 2 where R1 CONHSO2NMe2; R2 is dimethylaminoethyl; R3 is methyl; or NR2R3 taken together is 3,5- dimethymiorpholinyl or NR2R3 taken together is 3-methyl-3,8- diazabicyclo[3.2.1]oct-8-yl; R4 is hydrogen or methyl; R5 is hydrogen or methyl; or R4 and R5 taken together is oxo; R6 is methoxy; R7 is cyclohexyl; or a pharmaceutically acceptable salt thereof.
- 4. A compound of claim 1 where R1 is CONR9R10; R9 is alkylSO2j cycloalkylSO2, haloalkylSO2, (Rn)(R12)NSO2, or (RB)SO2; and R10 is hydrogen.
- 5. A compound of claim 1 where R6 is hydrogen.
- 6. A compound of claim 1 where R6 is methoxy.
- 7. A compound of claim 1 where R7 is cyclohexyl.
- 8. A compound of claim 1 where R9 is (R11)(R12)NSO2 or (R13)SO2.
- 9. A compound of claim 1 with the following stereochemistry.
- 10. A compound of claim 1 selected from the group consisting ofor a pharmaceutically acceptable salt thereof.
- 11. A composition comprising a compound of claim 1 , or a pharmaceutically acceptable salt thereof , and a pharmaceutically acceptable carrier.
- 12. The composition of claim 11 further comprising at least one additional compound having therapeutic benefits for HCV wherein the compound is selected from the group consisting of interferons, cyclosporins, interleukins, HCV metalloprotease inhibitors, HCV serine protease inhibitors, HCV polymerase inhibitors, HCV helicase inhibitors, HCV NS4B protein inhibitors, HCV entry inhibitors, HCV assembly inhibitors, HCV egress inhibitors, HCV NS5A protein inhibitors, HCV NS5B protein inhibitors, and HCV replicon inhibitors.
- 13. A method of treating hepatitis C infection comprising administering a therapeutically effective amount of a compound of claim 1 to a patient.
- 14. The method of claim 13 further comprising administering at least one additional compound having therapeutic benefits for HCV wherein the compound is selected from the group consisting of interferons, cyclosporins, interleukins, HCV metalloprotease inhibitors, HCV serine protease inhibitors, HCV polymerase inhibitors, HCV helicase inhibitors, HCV NS4B protein inhibitors, HCV entry inhibitors, HCV assembly inhibitors, HCV egress inhibitors, HCV NS5A protein inhibitors, HCV NS 5 B protein inhibitors, and HCV replicon inhibitors.
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US3996708P | 2008-03-27 | 2008-03-27 | |
| US61/039,967 | 2008-03-27 | ||
| PCT/US2009/038441 WO2009120890A1 (en) | 2008-03-27 | 2009-03-26 | Dioxolane and dioxolanone fused indolobenzadiazepine hcv ns5b inhibitors |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| AU2009228214A1 AU2009228214A1 (en) | 2009-10-01 |
| AU2009228214B2 true AU2009228214B2 (en) | 2013-08-08 |
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