AU695276B2 - Bacterial protein with xylanase activity - Google Patents
Bacterial protein with xylanase activityInfo
- Publication number
- AU695276B2 AU695276B2 AU37381/95A AU3738195A AU695276B2 AU 695276 B2 AU695276 B2 AU 695276B2 AU 37381/95 A AU37381/95 A AU 37381/95A AU 3738195 A AU3738195 A AU 3738195A AU 695276 B2 AU695276 B2 AU 695276B2
- Authority
- AU
- Australia
- Prior art keywords
- xylanase
- protein
- activity
- bacterium
- ability
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Ceased
Links
- 101710121765 Endo-1,4-beta-xylanase Proteins 0.000 title claims description 120
- 230000000694 effects Effects 0.000 title claims description 69
- 108010077805 Bacterial Proteins Proteins 0.000 title description 2
- 102000004169 proteins and genes Human genes 0.000 claims description 48
- 108090000623 proteins and genes Proteins 0.000 claims description 48
- 241000894006 Bacteria Species 0.000 claims description 39
- 238000000034 method Methods 0.000 claims description 24
- 238000004061 bleaching Methods 0.000 claims description 22
- 150000004823 xylans Chemical class 0.000 claims description 20
- 229920001221 xylan Polymers 0.000 claims description 19
- 238000004519 manufacturing process Methods 0.000 claims description 18
- 230000008569 process Effects 0.000 claims description 17
- 239000002655 kraft paper Substances 0.000 claims description 16
- 108010059892 Cellulase Proteins 0.000 claims description 12
- 229940106157 cellulase Drugs 0.000 claims description 12
- 239000000203 mixture Substances 0.000 claims description 12
- 239000002023 wood Substances 0.000 claims description 12
- 238000002360 preparation method Methods 0.000 claims description 11
- TVXBFESIOXBWNM-UHFFFAOYSA-N Xylitol Natural products OCCC(O)C(O)C(O)CCO TVXBFESIOXBWNM-UHFFFAOYSA-N 0.000 claims description 9
- HEBKCHPVOIAQTA-UHFFFAOYSA-N meso ribitol Natural products OCC(O)C(O)C(O)CO HEBKCHPVOIAQTA-UHFFFAOYSA-N 0.000 claims description 9
- 239000000811 xylitol Substances 0.000 claims description 9
- HEBKCHPVOIAQTA-SCDXWVJYSA-N xylitol Chemical compound OC[C@H](O)[C@@H](O)[C@H](O)CO HEBKCHPVOIAQTA-SCDXWVJYSA-N 0.000 claims description 9
- 229960002675 xylitol Drugs 0.000 claims description 9
- 235000010447 xylitol Nutrition 0.000 claims description 9
- 239000007844 bleaching agent Substances 0.000 claims description 8
- 239000000123 paper Substances 0.000 claims description 6
- 238000002415 sodium dodecyl sulfate polyacrylamide gel electrophoresis Methods 0.000 claims description 6
- 229920001817 Agar Polymers 0.000 claims description 5
- 239000008272 agar Substances 0.000 claims description 5
- 239000001963 growth medium Substances 0.000 claims description 5
- 239000007787 solid Substances 0.000 claims description 5
- 230000007935 neutral effect Effects 0.000 claims description 4
- 239000000758 substrate Substances 0.000 claims description 4
- 239000006142 Luria-Bertani Agar Substances 0.000 claims description 3
- 230000001580 bacterial effect Effects 0.000 claims description 3
- 239000002361 compost Substances 0.000 claims description 3
- 239000002761 deinking Substances 0.000 claims description 3
- 239000003381 stabilizer Substances 0.000 claims description 3
- 239000002609 medium Substances 0.000 claims description 2
- 235000008429 bread Nutrition 0.000 claims 2
- 108090000790 Enzymes Proteins 0.000 description 14
- 102000004190 Enzymes Human genes 0.000 description 14
- 229940088598 enzyme Drugs 0.000 description 14
- 235000010633 broth Nutrition 0.000 description 13
- 238000000855 fermentation Methods 0.000 description 9
- 230000004151 fermentation Effects 0.000 description 9
- SRBFZHDQGSBBOR-IOVATXLUSA-N D-xylopyranose Chemical compound O[C@@H]1COC(O)[C@H](O)[C@H]1O SRBFZHDQGSBBOR-IOVATXLUSA-N 0.000 description 8
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 8
- 229920005610 lignin Polymers 0.000 description 8
- 239000000126 substance Substances 0.000 description 7
- 229920001131 Pulp (paper) Polymers 0.000 description 5
- 239000006137 Luria-Bertani broth Substances 0.000 description 4
- PYMYPHUHKUWMLA-UHFFFAOYSA-N arabinose Natural products OCC(O)C(O)C(O)C=O PYMYPHUHKUWMLA-UHFFFAOYSA-N 0.000 description 4
- SRBFZHDQGSBBOR-UHFFFAOYSA-N beta-D-Pyranose-Lyxose Natural products OC1COC(O)C(O)C1O SRBFZHDQGSBBOR-UHFFFAOYSA-N 0.000 description 4
- 238000004537 pulping Methods 0.000 description 4
- 230000000717 retained effect Effects 0.000 description 4
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 4
- ZAMOUSCENKQFHK-UHFFFAOYSA-N Chlorine atom Chemical compound [Cl] ZAMOUSCENKQFHK-UHFFFAOYSA-N 0.000 description 3
- 241000196324 Embryophyta Species 0.000 description 3
- PEDCQBHIVMGVHV-UHFFFAOYSA-N Glycerine Chemical compound OCC(O)CO PEDCQBHIVMGVHV-UHFFFAOYSA-N 0.000 description 3
- 210000002421 cell wall Anatomy 0.000 description 3
- 229920002678 cellulose Polymers 0.000 description 3
- 239000001913 cellulose Substances 0.000 description 3
- 239000000460 chlorine Substances 0.000 description 3
- 229910052801 chlorine Inorganic materials 0.000 description 3
- 150000001875 compounds Chemical class 0.000 description 3
- 239000000499 gel Substances 0.000 description 3
- 239000002054 inoculum Substances 0.000 description 3
- 239000000463 material Substances 0.000 description 3
- 239000011159 matrix material Substances 0.000 description 3
- 238000000746 purification Methods 0.000 description 3
- 239000000243 solution Substances 0.000 description 3
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 2
- 235000014469 Bacillus subtilis Nutrition 0.000 description 2
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 2
- 229920003043 Cellulose fiber Polymers 0.000 description 2
- 239000004155 Chlorine dioxide Substances 0.000 description 2
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 2
- 238000002835 absorbance Methods 0.000 description 2
- 239000004480 active ingredient Substances 0.000 description 2
- 238000013019 agitation Methods 0.000 description 2
- 238000003556 assay Methods 0.000 description 2
- 229940041514 candida albicans extract Drugs 0.000 description 2
- 229910052799 carbon Inorganic materials 0.000 description 2
- 210000004027 cell Anatomy 0.000 description 2
- 238000012512 characterization method Methods 0.000 description 2
- 239000003153 chemical reaction reagent Substances 0.000 description 2
- 239000003795 chemical substances by application Substances 0.000 description 2
- OSVXSBDYLRYLIG-UHFFFAOYSA-N chlorine dioxide Inorganic materials O=Cl=O OSVXSBDYLRYLIG-UHFFFAOYSA-N 0.000 description 2
- 235000019398 chlorine dioxide Nutrition 0.000 description 2
- KRKNYBCHXYNGOX-UHFFFAOYSA-N citric acid Natural products OC(=O)CC(O)(C(O)=O)CC(O)=O KRKNYBCHXYNGOX-UHFFFAOYSA-N 0.000 description 2
- 230000000593 degrading effect Effects 0.000 description 2
- 239000008367 deionised water Substances 0.000 description 2
- 239000000706 filtrate Substances 0.000 description 2
- 235000013305 food Nutrition 0.000 description 2
- 239000011121 hardwood Substances 0.000 description 2
- 238000011534 incubation Methods 0.000 description 2
- 229920001282 polysaccharide Polymers 0.000 description 2
- 239000005017 polysaccharide Substances 0.000 description 2
- 150000004804 polysaccharides Chemical class 0.000 description 2
- 239000003265 pulping liquor Substances 0.000 description 2
- 230000009467 reduction Effects 0.000 description 2
- 238000011218 seed culture Methods 0.000 description 2
- 239000011122 softwood Substances 0.000 description 2
- 239000012137 tryptone Substances 0.000 description 2
- 125000000969 xylosyl group Chemical group C1([C@H](O)[C@@H](O)[C@H](O)CO1)* 0.000 description 2
- 239000012138 yeast extract Substances 0.000 description 2
- QGGOCWIJGWDKHC-FSIIMWSLSA-N (2s,3s,4r,5r)-2,4,5-trihydroxy-3-methoxy-6-oxohexanoic acid Chemical group OC(=O)[C@@H](O)[C@@H](OC)[C@H](O)[C@@H](O)C=O QGGOCWIJGWDKHC-FSIIMWSLSA-N 0.000 description 1
- LWFUFLREGJMOIZ-UHFFFAOYSA-N 3,5-dinitrosalicylic acid Chemical compound OC(=O)C1=CC([N+]([O-])=O)=CC([N+]([O-])=O)=C1O LWFUFLREGJMOIZ-UHFFFAOYSA-N 0.000 description 1
- PXRKCOCTEMYUEG-UHFFFAOYSA-N 5-aminoisoindole-1,3-dione Chemical compound NC1=CC=C2C(=O)NC(=O)C2=C1 PXRKCOCTEMYUEG-UHFFFAOYSA-N 0.000 description 1
- 244000063299 Bacillus subtilis Species 0.000 description 1
- FBPFZTCFMRRESA-FSIIMWSLSA-N D-Glucitol Natural products OC[C@H](O)[C@H](O)[C@@H](O)[C@H](O)CO FBPFZTCFMRRESA-FSIIMWSLSA-N 0.000 description 1
- FBPFZTCFMRRESA-JGWLITMVSA-N D-glucitol Chemical compound OC[C@H](O)[C@@H](O)[C@H](O)[C@H](O)CO FBPFZTCFMRRESA-JGWLITMVSA-N 0.000 description 1
- 125000000214 D-xylosyl group Chemical group C1([C@H](O)[C@@H](O)[C@H](O)CO1)* 0.000 description 1
- 229920002271 DEAE-Sepharose Polymers 0.000 description 1
- 241000396461 Eucalyptus diversicolor Species 0.000 description 1
- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 description 1
- 229920002488 Hemicellulose Polymers 0.000 description 1
- 229910020437 K2PtCl6 Inorganic materials 0.000 description 1
- 239000006391 Luria-Bertani Medium Substances 0.000 description 1
- QAOWNCQODCNURD-UHFFFAOYSA-L Sulfate Chemical compound [O-]S([O-])(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-L 0.000 description 1
- 240000008042 Zea mays Species 0.000 description 1
- 235000005824 Zea mays ssp. parviglumis Nutrition 0.000 description 1
- 235000002017 Zea mays subsp mays Nutrition 0.000 description 1
- QUZOEFLARODAMV-UHFFFAOYSA-K [OH-].[OH-].[OH-].[Na+].O=[Cl+]=O.O=[Cl+]=O Chemical compound [OH-].[OH-].[OH-].[Na+].O=[Cl+]=O.O=[Cl+]=O QUZOEFLARODAMV-UHFFFAOYSA-K 0.000 description 1
- 238000005273 aeration Methods 0.000 description 1
- 241001148470 aerobic bacillus Species 0.000 description 1
- 239000012670 alkaline solution Substances 0.000 description 1
- 230000004075 alteration Effects 0.000 description 1
- 150000001413 amino acids Chemical class 0.000 description 1
- 125000000328 arabinofuranosyl group Chemical group C1([C@@H](O)[C@H](O)[C@H](O1)CO)* 0.000 description 1
- 230000008901 benefit Effects 0.000 description 1
- 230000015572 biosynthetic process Effects 0.000 description 1
- 150000001720 carbohydrates Chemical class 0.000 description 1
- 235000014633 carbohydrates Nutrition 0.000 description 1
- 239000003054 catalyst Substances 0.000 description 1
- 239000011248 coating agent Substances 0.000 description 1
- 238000000576 coating method Methods 0.000 description 1
- 238000010411 cooking Methods 0.000 description 1
- 235000005822 corn Nutrition 0.000 description 1
- 239000007857 degradation product Substances 0.000 description 1
- 238000004925 denaturation Methods 0.000 description 1
- 230000036425 denaturation Effects 0.000 description 1
- -1 dextrose Chemical class 0.000 description 1
- 239000008121 dextrose Substances 0.000 description 1
- 230000004069 differentiation Effects 0.000 description 1
- 239000006185 dispersion Substances 0.000 description 1
- 238000006911 enzymatic reaction Methods 0.000 description 1
- 238000000605 extraction Methods 0.000 description 1
- 239000000835 fiber Substances 0.000 description 1
- 235000011389 fruit/vegetable juice Nutrition 0.000 description 1
- 239000002920 hazardous waste Substances 0.000 description 1
- 230000006698 induction Effects 0.000 description 1
- 239000012978 lignocellulosic material Substances 0.000 description 1
- 238000005360 mashing Methods 0.000 description 1
- 239000012528 membrane Substances 0.000 description 1
- 230000004060 metabolic process Effects 0.000 description 1
- 244000005700 microbiome Species 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 229910052757 nitrogen Inorganic materials 0.000 description 1
- 235000015097 nutrients Nutrition 0.000 description 1
- 229920000642 polymer Polymers 0.000 description 1
- 239000012286 potassium permanganate Substances 0.000 description 1
- 238000004076 pulp bleaching Methods 0.000 description 1
- 230000009257 reactivity Effects 0.000 description 1
- 239000012465 retentate Substances 0.000 description 1
- 238000013207 serial dilution Methods 0.000 description 1
- 238000001542 size-exclusion chromatography Methods 0.000 description 1
- 239000011780 sodium chloride Substances 0.000 description 1
- 239000001488 sodium phosphate Substances 0.000 description 1
- 229910000162 sodium phosphate Inorganic materials 0.000 description 1
- GRVFOGOEDUUMBP-UHFFFAOYSA-N sodium sulfide (anhydrous) Chemical compound [Na+].[Na+].[S-2] GRVFOGOEDUUMBP-UHFFFAOYSA-N 0.000 description 1
- 239000000600 sorbitol Substances 0.000 description 1
- 241000894007 species Species 0.000 description 1
- 239000008223 sterile water Substances 0.000 description 1
- 125000001424 substituent group Chemical group 0.000 description 1
- 150000005846 sugar alcohols Polymers 0.000 description 1
- 229910021653 sulphate ion Inorganic materials 0.000 description 1
- 238000003786 synthesis reaction Methods 0.000 description 1
- RYFMWSXOAZQYPI-UHFFFAOYSA-K trisodium phosphate Chemical compound [Na+].[Na+].[Na+].[O-]P([O-])([O-])=O RYFMWSXOAZQYPI-UHFFFAOYSA-K 0.000 description 1
- 238000000108 ultra-filtration Methods 0.000 description 1
- 241001624918 unidentified bacterium Species 0.000 description 1
- 235000015099 wheat brans Nutrition 0.000 description 1
Landscapes
- Enzymes And Modification Thereof (AREA)
Description
BACTERIAL PROTEIN WITH XYI-ANASE ACTIVITY
This invention relates to proteins with xylanase activity derived from bacteria, and in particular to xylanases which are free of any significant cellulase activity and which are active at high temperature and at neutral to alkaline pH. Xylanases having these characteristics are particularly useful in the bleaching of wood pulps, such as kraft pulps.
BACKGROUND OF THE INVENTION Enzymes are proteins present in all living cells, where apart from controlling metabolic processes, they break down food materials into simpler compounds. The enzymes are catalysts which speed up processes which would otherwise proceed very slowly, or not at all. Moreover, enzymes are very specific, breaking down only one type of compound.
Xylan is a polysaccharide found in most plant cell walls, consisting of D-xylose units linked by β-1-4 glycosidic bonds. It occurs with another polysaccharide, cellulose and an amorphous binding polymer, lignin. Xylan forms a major component of plant hemicelluloses, and varies in the nature of substituents on the sugar groups, depending on the origin. For example, xylans derived from hardwoods typically consist of a backbone of O-acetyl-4-O- methylglucuronoxylan, in which about 10% of the xylose units carry 4-O-methylglucuronic acid side chains linked via α-1,2 bonds, and 70% of the xylose residues are acetylated at C-2 or C-3. In contrast, xylans derived from softwoods are usually arabino-4-O-methylglucuronoxylans in which over 10% of the xylose sub-units carry arabinofuranose residues linked via α-1,3 bonds. Enzymes which are able to degrade xylan are called xylanases (endo- 1,4-β-D-xylanases; International enzyme nomenclature EC 3.2.1.8) .
Commercial preparations of xylanase, often in combination with other cell wall degrading enzymes, have been used in the extraction or liquefaction of plant material. For example, in the food industry, the mashing process for the production of juices can be made to produce higher yields emd better processing with the application of cell wall degrading enzymes, which include xylanase.
The primary source of cellulose for paper manufacture is wood, and may be either hardwood or softwood. The initial step in paper manufacture is the reduction of wood to the fibre state, which may be achieved by mechanical or chemical pulping methods. Chemical pulping involves the "cooking" of woodchips with chemical reagents in order to separate the cellulose fibres from the other wood components, and to break down the lignin and other extraneous compounds so that the cellulose is left in tact in its fibrous form. The most common process is the kraft or sulphate process, which can be applied to almost any timber species. The active ingredients are sodium hydroxide and sodium sulphide in a strongly alkaline solution.
During the kraft pulping process, xylan in the wood is initially dissolved in the pulping liquor, but with time, reprecipitates on to the resulting pulp. Wood lignin is modified and dissolved by the pulping liquors. However, about 10% of the lignin remains in the kraft pulp. To - brighten the pulp, the lignin must be removed by bleaching chemicals, such as chlorine, which generate environmentally hazardous wastes. More recently, commercial xylanase preparations have been used as an aid to the bleaching of kraft wood pulps. A program of cooperation between research institutes and the pulping industry has shown that treating the unbleached kraft pulp with xylanase results in a reduction in the amount of bleaching chemicals required to obtain a full brightness pulp. It is believed that xylanase acts as a bleaching aid (bleach booster) by
releasing some trapped residual lignin within the pulp matrix and giving better access to bleaching chemicals. It is widely believed that xylanase breaks down reprecipitated xylan which forms a coating on the pulp, thus releasing trapped residual lignin from within the pulp matrix, and allowing better access of bleaching chemicals to this matrix. Thus xylanase acts as a bleaching aid or bleach booster.
In the kraft process, the pulp is typically handled at high temperatures and neutral to alkaline pH. Commercial xylanases typically have a temperature optimum of about 50°C and a pH optimum of about 5, and are thus subject to rapid denaturation under process conditions. Thus there is a need for xylanases which are able to act optimally on the kraft pulp without any requirement to adjust the temperature or pH. In order to be useful as a bleaching aid, the xylanase must also be free of any significant cellulase activity, since cellulase would cause an undesirable loss of cellulose fibre. We have screened microorganisms newly isolated from a range of environments in order to identify those which produce high levels of xylanases with high temperature optima and which are active at neutral to alkaline pH. A previously unidentified bacterium isolated from white-rotted wood, produces such a xylanase in high yield and free of significant cellulase activity. Thus bacterium is a strain of Bacillus Subtilis which we have designated B230.
Summary of the Invention According to one aspect, the invention provides a bacterium, isolatable from wood compost, having the following characteristics:
A. Ability to grow at a temperature between 20° and 45°; B. Ability to grow in the pH range of 5 to
9.5;
C. Ability to grow on Luria-Bertani agar at 37°;
D. Ability to grow under solid state or submerged culture conditions; and E. Constitutive production and/or extracellular release of at least one protein with xylanase activity having an associated cellulase activity of less than 0.1, said at least one protein having a molecular weight of about 28kD.
Prefer-ably the bacterium is isolated such that a biologically pure culture exits.
Preferably xylanase production is enhanced by growth in the presence of xylan or of lignocellulose substrates, or degradation products, including xylose and xylitol, derived from such substrates.
More preferably the xylanase has at least one characteristic selected from the group consisting of activity at about pH between 4.5 and 9.5, a thermal activity range up to 70°C, and high thermal stability up to 65°C. Most preferably the xylanase produced by the bacterium is effective on both soluble and insoluble xylans.
In a particularly preferred embodiment, the bacterium has the characteristics of the bacterial isolate designated B230, as deposited under the provisions of the Budapest Treaty in the Australian Government Analytical Laboratories, PO Box 385, Pymble, New South Wales 2073, Australia, on 6 September 1994, under Accession No. N94/41262, or a mutant or derivative thereof having the ability to produce a xylanase as described above. The term "mutant or derivative" thereof includes naturally occurring and artificially induced mutants which retain their ability to digest xylans. Production of such mutants or derivatives will be well known by those skilled in the art.
According to a second aspect, the invention provides a process for producing at least one protein with
xylanase activity said process comprising cultivating a bacterium under conditions and for a time sufficient to produce said protein and collecting culture medium wherein said bacterium has the following characteristics: A. Ability to grow at a temperature between 20 and 45°;
Ability to grow in the pH range of 5 to
9.5; Ability to grow on Luria-Ber ani agar at
37"
D. Ability to grow under solid state or submerged culture conditions; and
E. Constitutive production and/or extracellular release of at least one protein with xylanase activity, said protein having an associated cellulase activity of <0.1%.
Preferably the bacterium used is strain B320 or a mutant, variant or derivative thereof.
Preferably the bacterium is grown under optimal conditions for extracellular production of said at least one protein. Still more preferably the production of said at least one protein is induced by the addition of xylitol to the culture medium. Preferably xylitol is added in an amount of 0.01 to 2% of the culture medium which is preferably a broth.
According to a thi∑rd aspect, the invention provides a protein with xylanase activity said protein having an associated cellulase activity of less than 0.1% and a molecular weight of about 28kD as determined by SDS- PAGE. Preferably the protein has at least one characteristic selected from the group consisting of activity at about pH between 4.5 and 9.5, a thermal activity range up to 70°C and high thermal stability up to 65°C. Preferably the protein is effective in digesting both soluble and insoluble xylans.
Preferably the protein with xylanase activity is isolatable from the bacterium described above. More
preferably the protein is isolated from the bacterial strain B230.
Preferably the protein with xylanase activity is an isolated preparation meaning that it has undergone some purification away from other proteins and/or non- proteinatious material. The purity of the preparation may be represented as at least 40% protein with xylanase activity, preferably at least 60% protein, more preferably at least 75% protein with xylanase activity, still more preferably at least 80% protein with xylanase activity or greater, as determined by weight, activity, amino acid composition or similarity, antibody reactivity or any other convenient means.
According to a fourth aspect, the invention provides a composition comprising said protein with xylanase activity as an active ingredient together with an industrially acceptable stabiliser. The composition may be used as a bleaching aid or bleaching booster or in paper deinking. Those skilled in the art will be familiar with the types of industrially acceptable stabilisers which may be used such as glycerol, sorbitol or other polyalcohols.
The composition described above is for use in bleaching kraft pulp or deinking paper. Accordingly, in a fifth aspect the present invention provides a method of bleaching wood or paper pulp comprising administering a bleaching aid or bleaching booster effective amount of the composition to said pulp, for a time and under conditions sufficient to achieve the desired bleaching of the pulp.
The protein of the present invention may also be used in the preparation of animal feed and in preparation of dough for bread-making.
We have found that the bacterium B230, when grown under suitable fermentation conditions, will produce xylanase which accumulates in the extracellular fermentation broth. The xylanase from such a broth has a thermal activity range from ambient up to 70°C and a useful pH range from 5 to 9, with optimal activity at pH 6 - 6.5.
The xylanase has very high thermal stability, retaining 100% activity after 3 hrs and 90% activity after 22 hrs at 60°C. Cellulase activity associated with the xylanase is minimal (<0.1%). The crude preparation may be used however partially purified xylanase may also be used.
While the following description refers to a single xylanase, our results indicate that there are in fact at least two different xylanases produced during fermentation of bacterium B230, and all xylanases produced by this organism are within the scope of the invention.
Description of the Invention
The invention will now be described by way of reference only to the following non-limiting examples, and to the figures, in which:
Figure 1 shows the variation of activity of xylanase from bacterium B230 with pH compared with that from bacterium B698, and
Figure 2 illustrates the variation in activity of xylanase from bacterium B230 with temperature, compared with that from bacterium B698.
Figure 3 is a photograph of a SDS-PAGE gel of the purified enzyme having an approximate molecular weight of
28kD. Figure 4 is a photograph of a SDS-PAGE gel of fermenter broth proteins including xylitol induced xylanase. Compared with proteins from non-induced cultures, the xylanase protein can be identified as having an approximate molecular weight of 28kD. Figure 5 illustrates the colour units release by xylanase from bacterium B230 at a range of pH and temperatures.
Example 1
A bacterium which we have designated B230 was isolated from a sample of white-rotted karri wood; this sample was collected from near Walpole, Western Australia,
in May 1993.
Approximately 0.5g of sample was placed in a 25mL conical flask. To this was added lOmL of sterile deionised water, and the flask was placed on an orbital shaker at room temperature for 30 minutes. Serial dilutions of the water dispersion were prepared as follows:
0. mL of sterile water was added into four lmL sterile tubes. A sample of water (O.lmL) from the lOmL flask was added to the first tube. The contents of the tube were mixed well, and O.lmL added to the second tube, and the procedure was repeated down to the fourth tube.
Samples (0.1 mL) from each tube was streaked onto Luria-Bertani agar. The agar plates were sealed and placed in a incubator at 37°C overnight. Colonies of bacteria appeared on the plates, and individual colonies were picked off and replated onto fresh Luria-Bertani plates.
The composition of Luria-Bertani medium is: tryptone lOg yeast extract 5g sodium chloride lOg deionised water 1L For Luria-Bertani (LB) agar, 18g of agar is added to the above components. All media were sterilised by autoclaving at 121°C for 20 minutes. The organism was isolated in pure culture, and a sample was deposited under the Budapest Treaty in the Australian Government Analytical Laboratories as described above.
The bacterium has the following taxonomic characteristics: rod-shaped bacterium with a centrally-located spore
Gram positive obligately aerobic Bacillus subtilis (by VITEK method)
Example 2 Growth Conditions
The bacterium is not fastidious, and can be grown on a range of media, including LB broth. The requirements are: 1. a source of carbon, most conveniently a carbohydrate such as dextrose,
2. a source of nitrogen, most conveniently as a tryptone, and
3. complex nutrients, most conveniently as yeast extract.
The bacterium can be grown within the temperature range 20 to 45°C and within the pH range 5 to 9.5.
The bacterium can be grown successfully under different fermentation conditions, including solid state or submerged culture; fermentation continues under aerobic conditions with or without agitation.
Example 3 Production and Characterisation of Xylanase
When grown under the conditions described in Example 2, bacterium B230 synthesises xylanase, and releases the enzyme into the extracellular medium. While xylanase is produced constitutively, addition of xylan to the culture medium as an additional carbon source further enhances the level of xylanase production. The added xylan may be in the form of isolated wood xylan, or may be a component of lignocellulosic material such as wheat bran.
Xylanase was assayed using the following conditions:
Substrate: 1% birchwood xylan
Buffer: 50mM sodium phosphate/citric acid, pH 6. Incubation temperature: 50°C
Incubation time: 20 minutes
The enzyme reaction was stopped with 3,5- dinitrosalicylic acid (DNS) reagent which measures, using xylose standards, the amount of reducing sugar produced in 20 minutes. Enzyme units are expressed in nanokatals
(nkats), where 1 nkat is the amount of xylanase which will produce 1 nmole of xylose per second under the defined conditions.
Example 4 Production of Xylanase by Submerged Fermentation
Xylanase from B230 can conveniently be prepared by submerged fermentation. B230 seed culture can be prepared overnight in LB broth at 37°C. This inoculum is added to an LB broth containing beechwood xylan (2% w/v) . The pH of the broth is increased to pH 7.8 by the addition of 2M sodium hydroxide, and the temperature adjusted to 37°C. The broth is stirred (1,000 rpm) and aerated with filtered sterile air (0.7 L of air/L of broth/min) .
The seed inoculum is added to the broth and the above conditions of temperature, pH, agitation and aeration maintained. Samples of culture are taken at regular intervals to monitor the production of xylanase. Optimal levels of xylanase (11,000 nkat/mL) are obtained within 90 hours of fermentation.
Example 5 Characterisation of Xylanase
The crude enzyme preparation from the fermenter broth was characterised with respect to pH and temperature.
a) pH Optimum
The xylanase activity was determined as described above, with the exception that the buffer was changed to obtain a stable pH. The results are listed in Table 1 below. The data is further expressed in Figure 1. The optimal pH for xylanase activity was found to be pH 6-6.5.
Table 1 pH Profile of B230 Xylanase
PH Relative Xylanase Activity (%)
4 24
5 87
6 100
7 72
8 76
9 32
10 11
b) Temperature Optimum
The xylanase activity of B230 enzyme was determined as described above, except that the temperature was altered within the range from 40 to 80°C. Results are listed in Table 2 and further expressed in Figure 2. The optimal temperature for xylanase activity was found to be 60°C.
Table 2 Temperature Profile of B230 Xylanase
Temperature (°C) Relative Xylanase Activity (%)
40 45
50 63
60 100
65 80
70 42
80 8
Example 6 Thermal Stability
The stability of B230 xylanase was determined at pH 6 and 60°C, the optimal pH and temperature respectively for the enzyme system. Samples were tested for residual
activity at regular intervals as described in the xylanase assay conditions above. After 3 hours, 100% xylanase activity was retained. Even after 22 hours, 90% of the xylanase activity was retained. Thus, xylanase from B230 is very thermally stable.
The thermal stability at 60°C and 65°C at different pH values were determined over 2 hours. Results are in Table 3.
Table 3
Thermal Stability 60, 65°C, 2 hrs
Relative Xylanase Activity
PH 60°C 65°C
6 100 71
7 117 48
8 84 7
9 55 0
Example 7 Stability at 4°C
The stability of B230 xylanase was determined at 4°C by storing it at that temperature. Samples were tested for activity at regular intervals under the conditions described in the xylanase assay conditions above. After 22 days, 100% of the original activity was retained.
Example 8 Purification of Xylanase
A fraction of xylanases was partially purified by conventional purification techniques involving DEAE Sepharose and size exclusion chromatography. The xylanase fraction had a single band on SDS-PAGE at 28kDa as shown in Figure 3 and a purity of > 80%.
Example 9 Induction of 28kDa Xylanase
B230 seed culture was prepared overnight in LB broth at 37°. This inoculum was added equally to 2 flasks containing corn steep liquor (2%) and incubated at 37°C. To one flask, xylitol (to 0.1%) was added daily for 5 days. After 5 days both flask broths were centrifuged. The cell free broths were assayed for xylanase activity. Xylitol
induces xylanase (2,OOOnkat/ml) compared with uninduced broth (50nkat/ml) . A sample of each broth was concentrated by ultrafiltration (5kDa membrane), and the retentate run on an SDS-PAGE gel. As shown in figure 4, a protein band at approximately 28kDa was induced by xylitol. This is consistent with the purified xylanase in Example 8, figure 3.
Example 10
Use Of B230 Xylanase As A Bleaching Aid The crude xylanase system (167nkat/g of pulp) was mixed with unbleached kraft pulp (35 g oven dried basis) at consistency 8% and adjusted to pH 5, 7 or 9 with appropriate buffer. The mixture was incubated for 1 hr at 60°C. The pulp was then bleached with chlorine dioxide- sodium hydroxide-chlorine dioxide. The results are shown in Table 4.
Table 4
Kraft Pulp Bleaching B230
X at 60°C, 1 hr
Bleached Pulp
Treatment
Brightness Kappa Yield (%) Number (%)
(pH 5) DED (control) 78-.4 2.21 98.8
(pH 5) XDED 79.4 2.04 98.9
(pH 7) DED (control) 77.4 2.35 98.1
(pH 7) XDED 81.6 1.74 97.6
(pH 9) DED (control) 76.8 2.45 99.4
(pH 9) XDED 81.4 1.75 98.7
»ι - chlorine dioxide, 2.5% as chlorine, 70°C, 2 hr
D2 - chlorine dioxide, 0.5% as chlorine, 70°C, 1 hr E - sodium hydroxide, 1.5%, 50°C, 1 hr
X - xylanase treatment, pH 5, 7 or 9, 60°C, 1 hr
Kappa number is a measure of the amount of lignin in wood pulp. It is defined as the number of millilitres of 0.02M potassium permanganate solution which would be consumed by 1 gram of moisture-free pulp under AS 1301, APPITA P201 m-86, specified conditions.
It is evident from these results that bleaching in the presence of xylanase results in improved characteristics of brightness and kappa number, with yields comparable to that of the control. It is further evident that the xylanase gives optimal improvements in the alkaline pH range 7 to 9.
Example 11 Use of B230 as a Bleaching Aid - further example The crude xylanase system (167nkat/g of pulp) was mixed with unbleached kraft pulp (35g oven dried basis) at 8% consistency and adjusted to pH 5,6,7,8,9 or 10 with appropriate buffer. The mixture was incubated for 1 hr at either 50,60 or 70°C. After the set time, the pulp was filtered to obtain a filtrate sample. The filtrate sample was briefly centrifuged and the absorbance at 456 nm was measured in a spectrometer. Absorbance units were converted to Pt-Co colour units from a standard graph where 500 colour units was obtained by dissolving K2PtCl6 (1.246g), CoCl2.6H20 (l.OOg) and HC1 (lOOmL, 12M) in 1L of water. The colour units released from the pulp by the xylanase is a measure of the final bleach chemical savings. The optimal effective pH was found to be pH 7, independent of temperatures between 50 and 70°C (see figure 5) .
Example 12 Our earlier International Patent Application
PCT/AU95/00202 describes a xylanase-producing bacterium designated B698, which was isolated from wood compost, and which was deposited under the Budapest Treaty in the Australian Government Analytical Laboratories as Accession No. 94/7647.
The temperature profile, pH profile, thermal stability at 60°C and 65°C at different pH values, and bleach boosting activity of xylanases for B230 and B698 were compared, using the methods described above, and the results are summarised in Tables 5 to 9.
Table 5
Xylanase pH Profile
Birchwood xylan, 50°C
Relative Xylanase Activity (%) pH
B698 B230
4 15 24
5 83 87
6 100 100
6.5 99 Not determined
7 77 72
8 69 76
9 37 32
10 11 11
Table 6
Xylanase Temperature Profile
Birchwood xylan, pH 6
Relative Xylanase Activity (%)
Temperature
B698 B230
40 65 45
50 85 63
60 100 100
65 Not determined 80
70 51 42
80 27 8
Table 7 Thermal Stability 60°C, 2 hrs
Relative Xylanase Activity (%)
PH
B698 B230
6 93 100
7 104 117
8 76 84
9 44 55
Note: At 60°C, pH 6, both B698 and B230 xylanases retained 90% of their activity after 22 hours.
Table 8 Thermal Stability 65°C, 2 hrs
Relative Xylanase Activity (%)
PH
B698 B230
6 95 71
7 103 48
8 30 7
9 9 0
Table 9
Kraft Pulp Colour Difference
60°C, 1 hr
Colour Difference
PH
B698 B230
5 247 371
6 832 995
7 1084 1038
8 943 921
9 967 991
10 195 283
In general, the properties of the xylanases from the two organisms are very similar. However,
1. In solution, B698 xylanase retains more activity over a wider temperature range at pH 6. B6 8 xylanase is clearly more thermally stable at 65°C over the pH range 6-9 than B230 xylanase.
2. In solution, at 50°C there is no differentiation between the two enzymes over the pH range 4-10. 3. On kraft pulp, at 60°C, both B698 xylanase and B230 xylanase are effective bleach boosting agents over the pH range 6-9.
4. On kraft pulp, at 70°C, B230 xylanase is more effective than B698 as a bleach xylanase boosting agent. This is a significant advantage.
5. During fermentation, bacterium B230 expresses more xylanase than bacterium B698 (11,000 nkat/ml and 7,000 nkat/ml respectively.
It will be apparent to the person skilled in the art that while the invention has been described in some detail for the purposes of clarity and understanding, various modifications and alterations to the embodiments and methods described herein may be made without departing from the scope of the inventive concept disclosed in this specification.
Claims (21)
1. A bacterium, isolatable from wood compost, having the following characteristics:
A. Ability to grow at a temperature between 20° and 45°;
B. Ability to grow in the pH range of 5 to 9.5;
C. Ability to grow on Luria-Bertani agar at 37°; D. Ability to grow under solid state or submerged culture conditions; and E. Constitutive production and/or extracellular release of at least one protein with xylanase activity having an associated cellulase activity of less than
0.1%, wherein said at least one protein with xylanase activity has a molecular weight of about 28kD.
2. A bacterium according to Claim 1, which is a Gram positive, obligately aerobic rod-shaped spore-forming bacterium, in which the spores are centrally-located.
3. A bacterium according to Claim 1, or Claim 2 in which production of the at least one protein with xylanase activity is enhanced by growth in the presence of xylan, xylitol or of a lignocellulose substrate.
4. A bacterium according to Claim 1, Claim 2 or Claim 3 in which the at least one protein with xylanase activity has at least one characteristic selected from the group consisting of activity at about pH between 4.5 and 9.5, a thermal activity range up to 70°C, and high thermal stability up to 65°C.
5. A bacterium according to any one of Claims 1 to 4, in which the at least one protein with xylanase activity is effective on both soluble and insoluble xylans.
6. A bacterium having the characteristics of the bacterial isolate designated B230, as deposited in the Australian Government Analytical Laboratories under Accession No. N94/41262, or a mutant or derivative thereof having the ability to produce a protein with xylanase activity as defined in any one of Claims 1 to 5. 7. A process for producing at least one protein with xylanase activity said process comprising cultivating a bacterium under conditions and for a time sufficient to produce said protein and collecting culture medium wherein said bacterium has the following characteristics:
A. Ability to grow at a temperature between 20 and 45°
B. Ability to grow in the pH range of 5 to
9.5;
C. Ability to grow on Lauria-Bertani agar at
37°; D. Ability to grow under solid state or submerged culture conditions; and
E. Constitutive production and/or extracellular release of at least one protein with xylanase activity, said protein having an associated cellulase activity of <0.1%.
8. The process of claim 7 wherein an amount of xylitol is added to said medium effective to increase production of said at least one protein.
9. An isolated preparation of a protein with xylanase activity said protein having an associated cellulase activity of <0.1% and a molecular weight of about 28kD as determined by SDS-PAGE.
10. The preparation of Claim 9 wherein said protein has at least one characteristic selected from the group consisting of activity at about pH between 4.5 and 9.5, a thermal activity range of up to 70°C, and high thermal activity at 65°C.
11. A xylanase having associated cellulase activity of less than 0.1%, and which is produced by a bacterium as defined in any one of Claims 1 to 6.
12. A bleaching aid, bleach booster or paper deinking composition comprising the protein according to Claim 9 or the xylanase according to claim 11, together with an industrially acceptable stabiliser.
13. A process for bleaching kraft pulp, comprising the step of using the protein according to Claim 9 or the xylanase according to Claim 11 as a bleaching aid or bleach booster.
14. A process according to Claim 13, carried out at neutral to alkaline pH and/or at a temperature of 40° to 80°C.
15. A process according to Claim 14 carried out at a temperature of 50° to 70°C.
16. A process according to Claim 15, carried out at a temperature of 50° to 65°C.
17. A process for removal of printing ink from paper, comprising the step of using the protein according to Claim
9 or a xylanase according to claim 11.
18. A process for preparing an animal feed composition, comprising the step of adding the protein according to Claim 9 or the xylanase of Claim 11 to animal feed and forming said composition.
19. An animal feed composition comprising a protein according to Claim 9 or the xylanase of Claim 11.
20. A method of preparing dough for bread making which comprises the step of incorporating the protein according to Claim 9 or the xylanase of Claim 11 in said dough.
21. A dough for the preparation of bread, comprising the protein according to Claim 9 or the xylanase of Claim 11.
Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| AU37381/95A AU695276B2 (en) | 1994-10-26 | 1995-10-23 | Bacterial protein with xylanase activity |
Applications Claiming Priority (4)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| AUPM9008 | 1994-10-26 | ||
| AUPM9008A AUPM900894A0 (en) | 1994-10-26 | 1994-10-26 | Bacterial xylanase |
| PCT/AU1995/000709 WO1996013574A1 (en) | 1994-10-26 | 1995-10-23 | Bacterial protein with xylanase activity |
| AU37381/95A AU695276B2 (en) | 1994-10-26 | 1995-10-23 | Bacterial protein with xylanase activity |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| AU3738195A AU3738195A (en) | 1996-05-23 |
| AU695276B2 true AU695276B2 (en) | 1998-08-13 |
Family
ID=25623955
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| AU37381/95A Ceased AU695276B2 (en) | 1994-10-26 | 1995-10-23 | Bacterial protein with xylanase activity |
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Citations (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| AU2133295A (en) * | 1994-04-11 | 1995-10-30 | Biotech International Limited | Bacterial xylanase |
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| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| AU2133295A (en) * | 1994-04-11 | 1995-10-30 | Biotech International Limited | Bacterial xylanase |
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