AU784063B2 - Utilization of FPRL1 as a functional receptor by serum amyloid A (SAA) - Google Patents
Utilization of FPRL1 as a functional receptor by serum amyloid A (SAA) Download PDFInfo
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- AU784063B2 AU784063B2 AU63951/99A AU6395199A AU784063B2 AU 784063 B2 AU784063 B2 AU 784063B2 AU 63951/99 A AU63951/99 A AU 63951/99A AU 6395199 A AU6395199 A AU 6395199A AU 784063 B2 AU784063 B2 AU 784063B2
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- Australia
- Prior art keywords
- ala
- gly
- arg
- asp
- phe
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Description
WO 01/21188 PCT/US99/21770 UTILIZATION OF FPRL1 AS A FUNCTIONAL RECEPTOR BY SERUM AMYLOID A (SAA) FIELD OF THE INVENTION The present invention relates to the discovery that serum amyloid A (SAA) is a ligand for the FPRL1 receptor. Disclosed herein are novel biological tools for the study of SAA/FPRL1 complex assembly and prophylactics, therapeutics, and methods of use of the foregoing, which modulate the association of SAA with FPRL1 and thereby effect cellular responses.
BACKGROUND OF THE INVENTION Serum amyloid A (SAA), an acute phase protein, is normally present in serum at 0.1 pM levels, but increases by 1000 fold in systemic inflammatory conditions. (Sipe, Immunophysiology: The role of cells and cytokines in immunity and inflammation, 259-273 (1990); Kisilevsky, Medical Hypotheses, 35:337-341 (1991); Skinner, J. Inten. Med., 232:513-514 (1992); and Malle, E. and F.C. De Beer, Eur. J. C/in. Invest., 26:427435 (1996)). It has been proposed that SAA is involved in lipid transportation and metabolism. (Sipe, Immunophysiology: The role of cells and cytokines in immunity and inflammation, 259-273 (1990); Kisilevsky, Medical Hypotheses, 35:337-341 (1991); and Skinner, J. Inten. Med., 232:513-514 (1992)). Chronic inflammatory conditions with elevated serum SAA can culminate in amyloidosis, characterized by deposition of "amyloid" fibrils in tissues and associated with progressive destruction of organ function.
(Kisilevsky, Medical Hypotheses, 35:337-341 (1991); Skinner, J. Inten. Med., 232:513-514 (1992); '0 and Malle, E. and F.C. De Beer, Eur. J. Clin. Inves., 26:427-435 (1996)). Although a number of acute phase proteins are known to modulate host immune responses, recombinant human (ih) SAA has exhibited chemoattractant activity for human monocytes, neutrophils and T lymphocytes in vitro. (Badolato et al., J.
Exp. Med., 180:203-209 (1994); and Xu et al., J. Immunol., 155:1184-1190 (1995)). Further, rhSAA induces infiltration of phagocytic cells and T lymphocytes into injection sites in mice. (Badolato et al., J. Exp. Med., 180:203-209 (1994); and Xu et al., J. Immunol., 155:1184-1190 (1995)). Thus, many in the art recognize that SAA plays a role in cellular responses including, but not limited to, leukocyte migration, immune system response, amyloidosis, inflammatory response, infection, organ rejection, arthritis, atherosclerosis, and neoplasia.
Since SAA induces significant Ca2+ mobilization in phagocytes (Badolato et al., J. Immunol., 155:4004-4010 (1995)) and both its chemotactic and Ca 2 mobilizing effects are inhibited by pretreatment with pertussis toxin, SAA is thought to mediate cellular responses through G-protein-coupled receptors. (Xu et al., J. Immunol., 155:1184-1190 (1995); and Badolato et al., J. Immunol., 155:4004-4010 (1995)). Despite considerable effort, however, investigators have failed to identify the SAA receptor on human phagocytic cells that mediate the aforementioned cellular responses.
BRIEF SUMMARY OF THE INVENTION The acute phase protein serum amyloid A (SAA) is a potent chemoattractant for human leukocytes in vitro and mouse phagocytes in vivo. To identify the signalling mechanisms, we have evaluated patterns of cross-desensitization between SAA and other leukocyte chemoattractants. During these studies, we discovered that high concentrations of the chemotactic bacterial peptide, N-formyl-methionyl-leucylphenylalanine (fMLP), was able to specifically attenuate SAA induced Ca 2 mobilization in human phagocytes.
With this data in hand, we realized that SAA uses a low affinity fMLP receptor.
Further investigation revealed that SAA selectively induces Ca 2 mobilization and migration of cells that were transfected to express a seven-transmembrane G protein coupled receptor, FPRL1. FPRL1 is a human phagocyte receptor with low affinity for fMLP and a high affinity for lipoxin A4, a lipid mediator. More evidence that FPRL1 was the SAA receptor on human phagocytes was obtained from experiments that characterized the ability of radiolabeled SAA to bind to human phagocytes and 293 cells transfected to express FPRL1. In these studies, we found that SAA exhibits a high affinity for the FPRL1 receptor but is not a ligand or agonist for the high affinity fMLP receptor, FPR. Significantly, over the course of several 15 experiments, we have discovered that a SAA/FPRL1 complex can mediate signal transduction, leukocyte migration and activation, which account for the many activities of SAA in immune system response, amyloidosis, inflammatory response, infection, organ rejection, arthritis, atherosclerosis, and neoplasia.
In a broad format the invention provides a method of identifying a compound that modulates binding of SAA (serum amyloid A) to a FPRL1 (formyl peptide receptor-like 1) receptor comprising: "20 providing a test compound that is a peptide, peptidomimetic, or chemical; contacting a cell that expresses a FPRL1 receptor with the test compound in the presence of SAA; and measuring binding of SAA to said FRPL1 receptor, so that a compound that modulates binding of SAA to said FRPL1 receptor is identified.
BRIEF DESCRIPTION OF THE DRAWINGS FIGURE 1 Cross-desensitization of Ca 2 mobilization in human monocytes between SAA and fMLP. Fura-2 loaded monocytes were sequentially stimulated with SAA and fMLP (panel A) or vice versa (panel B and and the ratio of fluorescence at 340 and 380 nm wavelength was recorded and calculated with the FLWinLab program.
FIGURES 2A-2E Calcium mobilization in FPRL1 transfected HEK 293 cells. FPRL1/293 cells were loaded with Fura-2 and were stimulated with various concentrations of fMLP (FIGURE 2A) or SAA (FIGURE 2B). SAA does not induce Ca 2 mobilization in FPR expressing 293 cells or mock transfected 293 cells (FIGURES 2C-2D). FIGURE 2E shows the sequential stimulation of FPRL1/293 cells with SAA and fMLP or vice versa FIGURES 3A-3C Chemotactic activity of SAA for human monocytes and cells transfected to express chemoattractant receptors. Different concentrations of SAA were placed in the lower wells of the chemotaxis chamber. Monocytes, FPRL1/293 cells or FPR expressing ETFR cells were placed in the upper wells. After incubation, the cells migrated across the polycarbonate filter were counted and photographed; SAA 0.8 pM, fMLP 100 nM. The cell migration was expressed as chemotaxis index representing the fold increase of the cells migrating in response to stimulants over control medium. FIGURE 3A: migration of FPRL1/293 cells in response *o WO 01/21188 PCT/US99/21770 to SAA and fMLP. FIGURE 3B: migration of fPR expressing ETFR cells in response to SAA and fMLP. FIGURE 3C: effect of HDL on SAA induced FPRL1/293 cell migration. HDL at 1000 .g/iml mixed with 0.8 PIM SAA was preincubated at 37 0 C for 4 h. The mixture was then tested for chemotactic activity on FPRL1/293 cells. The HDLISAA mixture without preincubation was also tested for chemotactic activity and yielded similar results.
FIGURE 4 Binding of 12 5 1-SAA to human monocytes and FPRL1/293 cells. rhSAA was radio-iodinated by the chloramine T method and the binding of 12 5 1-SAA to FPRL1/293 cells (panel A) or monocytes (panel B) was measured by adding a constant concentration of 1 25 1-SAA to the cells in the presence of increasing concentrations of unlabeled SAA. The data was analyzed and plotted using LIGAND software on a Macintosh computer. Panel C shows the displacement of 12 5 1-SAA binding on monocytes by unlabeled SAA and fMLP.
Same results were obtained with FPLR1/293 cells (panel D).
DETAILED DESCRIPTION OF THE INVENTION In the disclosure herein, we describe the discovery of the SAA receptor on human phagocytes (FPRL1) and teach that modulation of the SAAIFPRL1 complex can influence cellular responses including, but not limited to, signal transduction, leukocyte migration, immune system response, amyloidosis, inflammatory response, infection, organ rejection, arthritis, atherosclerosis, and neoplasia. Novel biological tools for the study of the interaction of SAA, fragments of SAA, or homologs or derivatives thereof with FPRL1 are provided. Further, prophylactics, therapeutics, and methods of use of the foregoing, which modulate the association of SAA with FPRL1 and thereby effect the cellular responses described above, are taught.
We began the search that led to the discovery of the SAA/FPRL1 complex by investigating the effects of SAA and other chemoattractants on Ca 2 mobilization in monocytes and neutrophils. In primary cells, cross-desensitization of Ca 2 transients is often due to two agonists acting at the same receptor. (Wang et al., J. Exp. Med., 177:699-705 (1993)). During cross-desensitization experiments using SAA and other chemoattractants, we found that the bacterial chemotactic peptide N-formyl-methionyl-leucyl-phenylalanine (fMLP), when used at relatively high concentrations (10 p.M and more), was able to attenuate a subsequent cell response to SAA. These results led us to believe that SAA interacts with a low affinity fMLP receptor on leukocytes.
To date, two receptors that bind fMLP have been identified and cloned. (Reviewed in Prossnitz, E.R.
and R.D. Ye, Pharmacol. Ther., 74:73-102 (1997); and Murphy, Chemoattractant ligands and their receptors, pp. 269 (1996)). The prototype receptor, FPR, binds fMLP with high affinity and is activated by low concentrations of fMLP. Another highly homologous variant of FPR, named FPRL1 (also referred to as FPRH2 and LXA4R), was originally cloned as an orphan receptor (Murphy et al., J. Biol. Chem., 267:7637-7643 (1992); Ye et al., Biochem. Biophys. Res. Commun., 184:582-589 (19921; Bao et al., Genomics, 13:437-440 (1992); Gao, J.L. and P.M. Murphy, J. Biol. Chem., 268:25395-25401 (1993); and Nomura et al., Int.
WO 01/21188 PCT/US99/21770 Immuno., 5:1239-1249 (1993)) but was subsequently found to mediate Ca 2 mobilization in response to high concentrations of fMLP. (Ye et al., Biochem. Biophys. Res. Commun., 184:582-589 (1992); and Gao, J.L. and P.M. Murphy, J. Biol. Chem., 268:25395-25401 (1993)). Furthermore, a lipid metabolite, lipoxin A4 and its analogues, were found to bind FPRL1 with high affinity and increase arachidonic acid production and G-protein activation in FPRL1 transfected cells. (Fiore et al, J. Exp. Med., 180:253.260 (1994)).
LXA4 inhibits pro-inflammatory neutrophil responses (Fiore et al, J. Exp. Med., 180:253-260 (1994); Takano et al., J. Exp. Med., 185:1693-1704 (1997); Maddox et al., J. Biol. Chem., 272:6972-6978 (1997); Fiore et al., Blood, 81:3395-3403 (1993); Fiore, S. and C.N. Serhan, Biochemistry, 34:16678-16686 (1995); Gronert et al., J. Exp. Med., 187:1285-1294 (1998); Gewirtz et al., J. Clin. Invest., 101:1860-1869 (1998); Romano et al., J. Immunol., 157:2149-2154 (1994); and Colgan et al., J. Clin. Invest., 92:75-82 (1993)) as well as the release of the proinflammatory cytokine, 11-8 by epithelial cells. (Gronert et al., J. Exp. Med., 187:1285-1294 (1998); and Takano et al., J. Clin. Invest., 101:819-826 (1998)). These cellular responses have been attributed to activation of FPRL1 (or LXA4R) in neutrophils and epithelial cells.
Another lipid mediator receptor, the leukotriene B4 (LTB4) receptor, is structurally related to FPRL1 (30.7% amino acid sequence identity) (Yokomizo et al., Nature, 387:620-624 (1997)), and has also been reported to be a fusion co-factor for human immunodeficency virus type I (HIV-1) (Owman et al., Proc. Nat.
Acad. Sci USA., 95:9530-9534 (1998)), similar to various chemokine receptors (reviewed in ref. Berger, E.A., AIDS, 11:S3-16 (1997)). This activity has not been reported for FPRL1, however. (Murphy, P.M., Chemoattractant ligands and their receptors, pp. 269 (1996); and Berger, AIDS, 11:S3-16 (1997)).
Because our cross de-sensitization experiments provided evidence that a low affinity fMLP receptor interacted with SAA, we performed chemotactic assays and radioactive SAA binding studies on cells that were transfected to express different receptors. In one experiment, for example, we selectively induced Ca 2 mobilization by administering SAA and observed the migration of cells that were transfected to express FPRL1 receptors, which were not endogenous to these cell types. In another experiment, we found that radiolabeled SAA bound to FPRL1 but not the FPR receptor. Through these investigations, we have discovered a novel interaction between FPRL1 and SAA.
By enhancing or inhibiting ("modulating") assembly of the SAAIFPRL1 complex andlor SAA/FPRL1mediated signal transduction, cellular responses such as signal transduction, leukocyte migration, immune system response, amyloidosis, inflammatory response, infection, organ rejection, arthritis, atherosclerosis, and neoplasia can be selectively altered. In some aspects of the invention, the modulation of the assembly of the SAAIFPRL1 complex is accomplished by using a modulator that is a nucleic acid embodiment. For example, a construct encoding FPRL1 is transfected into cells so as to raise the concentration of FPRL1 and thereby promote SAA/FPRL1 complex assembly or, alternatively, a construct encoding a nucleic acid that is complementary to a nucleic acid encoding FPRL1 an antisense inhibitor or a ribozyme) is used to reduce the concentration of FPRL1 and thereby inhibit SAAIFPRL1 assembly. Further, in some embodiments, nucleic acids encoding wild-type or mutant SAA or fragments of SAA or complements of these nucleic acid molecules WO 01/21188 PCT/US99/21770 are transfected into cells so as to modulate SAAIFPRL1 complex assembly andfor SAAIFPRL1-mediated signal transduction.
According to other aspects, the modulation of the assembly of the SAA/FPRL1 complex andlor SAAJFPRL1-mediated signal transduction is achieved by using a modulator that is a protein-based embodiment.
For example, FPRL1 or fragments thereof can be delivered to cells by liposome-mediated transfer or administered to cells exogenously so as to modulate assembly of the SAA/FPRL1 complex or, alternatively, wild-type or mutant SAA, or fragments thereof can be administered to cells so as to modulate assembly of the SAA/FPRL1 complex andlor SAA/FPRL1-mediated signal transduction. Peptidomimetics that resemble SAA or FPRL1 or fragments thereof are also modulators of the invention and can be used to effect assembly of the SAAFPRL1 complex. Many chemicals can also be modulators and can be identified by their ability to effect assembly of the SAAIFPRL1 complex andlor SAAIFPRL1-mediated signal transduction using the SAAIFPRLU characterization assays described below. These embodiments can be manufactured as monomeric, multimeric, and multimerized agents.
Several types of assays that provide information about SAA or FPRL1 or the formation of the SAA/FPRL1 complex are embodiments of the invention. These assays are collectively referred to as "SAAIFPRL1 characterization assays". One type of SAA/FPRL1 characterization assay concerns measuring the ability of SAA or fragments thereof to bind to FPRL1 or vice versa. For example, methods of performing SAA/FPRL1 characterization assays are provided, in which FPRL1 or SAA are disposed on a support and are subsequently contacted with a ligand SAA or FPRL1 or a fragment thereof, depending on the supportbound molecule) and assembly of the SAAIFPRL1 complex is determined. A similar binding assay can be employed in the presence of an inhibiting or enhancing molecule (a "modulator") such as a peptide or peptidomimetic (collectively referred to as a "peptide agent") or a chemical. The supports in these assays can be conventional resins, plastics, lipids, membranes, and cells.
Other aspects of the invention utilize software and hardware comprising nucleic acid sequences encoding SAA or FPRL1 or fragments thereof or complements of these sequences and protein sequences corresponding to SAA or FPRL1 or fragments thereof. Aspects of the invention also utilize software and hardware having the aforementioned sequences to characterize two dimensional and three dimensional aspects of SAA and FPRL1, which allows one to develop protein models of SAA and FPRL1, identify homologous proteins, and conduct rational drug design. Methods of identification of agents that modulate assembly of the SAAIFPRL1 complex andlor SAAIFPRLI-mediated signal transduction, for example, use software and hardware that have the aforementioned sequence information.
The embodied approaches to rational drug design seek to identify novel agents that interact with SAA or FPRL1 and modulate assembly of the SAAIFPRL1 complex andlor SAA/FPRLI-mediated signal transduction.
Accordingly, protein models of SAA or FPRL1 or fragments of these molecules, and models of candidate modulating agents are constructed and combinatorial chemistry is employed to develop and identify agents that modulate assembly of the SAA/FPRL1 complex andlor SAAJFPRL1-mediated signal transduction. Once WO 01/21188 PCT/US99/21770 candidate agents are developed and identified, they are screened in a SAA/FPRL1 characterization assay a SAA adhesion assay). The identity of each agent and its performance in a SAAIFPRL1 characterization assay, its effect on the modulation assembly of the SAA/FPRL1 complex, can be recorded on software or hardware and the recorded data can be used to create a library of SAA/FPRL1 modulating agents. These libraries can be employed to identify more agents that modulate assembly of the SAAIFPRL1 complex and are valuable clinical tools for manufacturing and selecting an appropriate pharmaceutical to treat a particular type of malady.
In the therapeutic and prophylactic embodiments of the invention, SAA or FPRL1, polypeptide fragments of SAA or FPRL1, and nucleic acids encoding these molecules, and agents that interact with a SAAIFPRL1 complex are incorporated into pharmaceuticals. These pharmaceuticals can be delivered by any conventional route including, but not limited to, transdermal, parenteral, gastrointestinal, transbronchial, and transalveolar. In addition to the active ingredients mentioned above, the pharmaceutical embodiments can comprise carriers, proteins, supports, adjuvants, or components that facilitate or enhance drug delivery. These pharmaceuticals can be employed in therapeutic protocols for the treatment and prevention of a SAA-related malady an abnormal immune system response, amyloidosis, inflammation, infection, organ rejection, arthritis, atherosclerosis, and neoplasia). By one approach, a subject at risk for contracting a SAA-related malady or a subject already afflicted with a SAA-related malady is identified by conventional techniques and then is administered an effective amount of an agent that inhibits or promotes assembly of the SAA/FPRL1 complex. The discovery of the SAA/FPRL1 complex is disclosed in the following section.
Discovery of the SAA receptor on human leukocytes In a series of cross-desensitization experiments, we observed that SAA at 1 IM failked to desensitize the Ca 2 flux in monocytes or neutrophils induced by chemokines such as MCP-1, RANTES, MCP-3, MIP-lac IL-8 and SDF-lcc. We concluded from these findings that SAA was unlikely to share a receptor with any of the chemokines tested. Additionally, we observed that SAA did not attenuate the cell response to the bacterial chemotactic N-formylated peptide fMLP, when fMLP was used at 100 nM (10- 7 M) (FIGURE 1A). In reciprocal tests, however, fMLP at 100 nM showed a partial desensitizing effect on SAA-induced Ca 2 mobilization in monocytes (FIGURE 1B). The cellular response to SAA was completely desensitized by higher concentrations of fMLP (10- 3 M 1 mM, FIGURE 1C), providing evidence that SAA uses a low affinity fMLP receptor(s).
Since fMLP was known to induce Ca 2 mobilization in phagocytes through at least two seven transmembrane, G-protein-coupled receptors, FPR and FPRL1 (Murphy et al., J. Biol. Chem., 267:7637-7643 (1992); Ye et al., Biochem. Biophys. Res. Commun., 184:582-589 (1992); Gao, J.L and P.M. Murphy, J. Biol.
Chem., 268:25395-25401 (1993); and Murphy, P.M. and D. McDermott, J. Biol. Chem., 266:12560-12567 (1991)), we tested the effect of SAA using cells transfected to express these receptors. Prior to transfection, these cells were not responsive to fMLP stimulation. In the FPR-transfected rat basophil leukemia cell line WO 01/21188 PCT/US99/21770 (ETFR cells), we observed Ca 2 mobilization over a wide range of fMLP concentrations, with an EC50 of pM. In contrast, the EC50 for fMLP to induce Ca 2 mobilization in FPRL1 transfected cells (FPRL1/293 cells) was much higher at 10 p.M (FIGURE 2A). These results confirmed earlier observations that FPR is a high affinity receptor for fMLP, whereas FPRL1 has a much lower affinity. (Murphy et al., J. Biol. Chem., 267:7637-7643 (1992); Ye et al., Biochem. Biophys. Res. Commun., 184:582-589 (1992); Gao, J.L. and P.M.
Murphy, J. Biol. Chem., 268:25395-25401 (1993); and Murphy, P.M. and D. McDermott, J. Biol. Chem., 266:12560-12567 (1991)1.
Further, rhSAA induced Ca 2 mobilization in cells transfected with FPRL1 (FPRL11293 cells) (FIGURE 2B), but not in FPR expressing cells or mock transfected 293 cells (FIGURE 2C, The EC50 of rhSAA on FPRL1 transfected cells was 250 nM, suggesting that SAA activates FPRL1 with higher efficacy than fMLP.
This was supported by studies of cross-desensitization of Ca 2 flux between SAA and fMLP in FPRL1/293 cells. As shown in FIGURE 2E, although sequential stimulation of FPRL1/293 cells with SAA and fMLP resulted in bidirectional desensitization, SAA was able to desensitize the cell response to a 100 fold excess of fMLP. In contrast, fMLP at 100 fold excess of SAA, only partially desensitized the effect of SAA (FIGURE 2E).
Leukocyte infiltration in vivo is believed to result from the migration of cells toward a gradient of locally produced chemoattractant(s). This process can be emulated by in vitro assays of chemotaxis, which provide a very sensitive and biologically relevant means of evaluating the function of cloned chemoattractant receptors. (Gong et al., J. Biol. Chem. 272:11682-11685 (1997); Wang et al., J. Exp. Med., 177:699-705 (1993); Gong et al., J. Biol. Chem., 272:11682-11685 (1997); and Ben-Baruch et al., J. Bil. Chem.
270:22123-22128 (1995)). Since SAA was known to induce leukocyte infiltration in vivo (Badolato et al., J.
Exp. Med., 180:203-209 (1994); and Xu et al., J. Immunoa., 155:1184-1190 (1995)) and chemotaxis in vitro (Badolato et al., J. Exp. Med., 180:203-209 (1994); and Xu et al., J. Immunol., 155:1184-1190 (1995)), we sought to determine whether SAA could induce cell migration via FPRL1.
In our experiments on SAA induced chemotaxis in FPRL1/293 cells, we discovered that FPRL1/293 cells exhibit a potent migratory response to SAA, having an EC50 of 200 nM. Remarkably, these cells failed to migrate in response to a wide range of concentrations of fMLP (FIGURE 3A). The fMLP induced migration of FPR expressing ETFR cells occurred at nM range concentrations, whereas the same cells did not migrate in response to SAA (FIGURE 3B). These chemotaxis experiments established that fMLP is only a partial agonist for FPRL1 since the ligand failed to induce cell migration through FPRL1. On the other hand, SAA demonstrated full agonist activity on FPRLI. Further, both SAA induced Ca 2 mobilization and chemotaxis in FPRL1/293 cells were inhibited by pretreatment of the cells with pertussis toxin but not cholera toxin, which correlates with observations in native cells (Badolato et al., J. Exp. Med., 180:203-209 (1994); Xu et al., J.
Immunol., 155:1184-1190 (1995); and Badolato et al., J. Immunol., 155:4004-4010 (1995)).
Additionally, we examined the effect of HDL on the chemotactic activity of SAA for FPRL1/293 cells.
SAA can form complexes with HDL and HDL is a natural inhibitor of SAA. (Badolato et al., J. Exp. Med., WO 01/21188 PCT/US99/21770 180:203-209 (1994); and Xu et al., J. Immunol., 155:1184-1190 (1995)). FIGURE 3C shows that HOL, whether preincubated with SAA or simultaneously added to SAA, completely abolished SAA-induced FPRL1/293 cell migration. In contrast, the same concentration of HDL did not affect migration of FPR expressing ETFR cells induced by fMLP. These results confirmed that HDL specifically inhibited the agonist activity of SAA on FPRL1.
To further verify that FPRL1 is the SAA receptor, we performed ligand binding experiments. FIGURE 4 shows that radioiodinated SAA specifically bound to FPRL1I293 cells with an estimated kd at 64 nM and 42000 binding sites/cell (FIGURE 4A). 125 1.SAA also specifically bound to monocytes (FIGURE 4B) and neutrophils (Kd 45 nM, R 67001cell) with Kd values comparable to those achieved with FPRL1/293 cells.
In the displacement assay, unlabeled SAA inhibited its own binding to monocytes (FIGURE 4C), neutrophils and FPRL1/293 (FIGURE 40) in a dose-dependent manner, having an IC50 at about 50 nM. In contrast, unlabeled fMLP at high concentrations (10 pM) only partially competed with 12 5 1-SAA for binding. These results demonstrated that SAA is a far more efficient agonist for FPRL1 than fMLP.
In the experiments presented above, we have established that SAA associates with FPRL1, a seventransmembrane, G-protein coupled receptor that is expressed on phagocytes and promotes chemotaxis.
(Badolato et al., J. Exp. Med., 180:203-209 (1994); Xu at al., J. Immunol., 155:1184-1190 (1995); and Badolato et al., J. Immunol., 155:4004-4010 (1995)). We have discovered that SAA mediates cellular responses by forming a complex with FPRL1. Although FPRL1 had previously been shown to be a low affinity receptor for fMLP (Ye et al., Biochem. Biophys. Res. Commun., 184:582-589 (1992); and Gao, J.L. and P.M.
Murphy, J. Biol. Chem., 268:25395-25401 (1993)) and a high affinity receptor for lipid metabolite LXA4 and its analogues (Fiore et al, J. Exp. Med., 180:253-260 (1994); Takano et al., J. Exp. Med., 185:1693-1704 (1997); Maddox et al., J. Bio. Chem., 272:6972-6978 (1997); Fiore et al., Blood, 81:3395-3403 (1993); Fiore, S. and C.N. Serhan, Biochemistry, 34:16678-16686 (1995); Gronert et al., J. Exp. Med., 187:1285-1294 (1998); Gewirtz et al., J. Clin. Invest., 101:1860-1869 (1998); Romano et al., J. Immunol., 157:2149-2154 (1994); Colgan et al., J. Clin. Invest., 92:75-82 (1993); and Takano et al., J. Clin. Invest., 101:819-826 (1998)1, until the present disclosure, it was not known that SAA interacts with FPRL1. Unlike fMLP, which is a partial agonist incapable of inducing chemotaxis via FPRL1, SAA is the first chemotactic agonist produced in humans identified for FPRL1.
FPRL1 was identified and molecularly cloned from human phagocytic cells by low stringency hybridization of the cDNA library with the FPR sequence and was initially defined as an orphan receptor.
(Murphy et al, J. Bio. Chem., 267:7637-7643 (1992); Ye et al., Biochem. Biophys. Res. Commun., 184:582- 589 (1992); Gao, J.L. and P.M. Murphy, J. Biol Chem., 268:25395-25401 (1993); and Nomura et al., Int.
Immunol., 5:1239-1249 (1993)). The cloning of the same receptor termed FPRH2 from a genomic library was described by Bao et al. (Bao et al., Genomics, 13:437.440 (1992)). FPRL1 possesses 69% identity at the amino acid level to FPR, the prototype receptor for synthetic and bacterium-derived formylated peptides (Prossnitz, WO 01/21188 PCT/US99/21770 E.R. and R.D. Ye, Pharmaco/. Ther., 74:73-102 (1997); and Murphy, Chemoattractant ligands and their receptors pp. 269 (1996)). Both FPR and FPRL1 are expressed by monocytes and neutrophils and are clustered on human chromosome 19q13. (Bao et al., Genomics, 13:437-440 (1992); and Durstin et al., Biochem.
Biophys. Res. Commun., 201:174-179 (1994)). While fMLP is a high affinity agonist for FPR, it interacts with FPRL1 and transduces signals in response to fMLP only at high concentrations. (FIGURE 2 and ref: Ye et al., Biochem. Biophys. Res. Commun., 184:582-589 (1992); Gao, J.L. and P.M. Murphy, J. Biol. Chem., 268:25395-25401 (1993); and Durstin et al., Biochem. Biophys. Res. Commun., 201:174-179 (1994)). SAA, on the other hand, selectively binds and activates FPRL1 at physiologically relevant concentrations, which under inflammatory stimulation could reach 80 pM in the serum. (Sipe, Immunophysiology: The role of cells and cytokines in immunity and inflammation, 259-273 (1990); Kisilevsky, Medical Hypotheses, 35:337-341 (1991); Skinner, J. Inten. Med., 232:513-514 (1992); and Malle, E. and F.C. De Beer, Eur. J.
Clin. Invest, 26:427-435 (1996)).
FPRL1 is predominantly expressed in monocytes and neutrophils. However, cells other than phagocytes such as hepatocytes have also been shown to express FPRL1. (Prossnitz, E.R. and R.D. Ye, Pharmacol. Ther., 74:73-102 (1997)). Recently, the expression of this receptor (also termed LXA4R) has been reported to be highly inducible in epithelial cells by specific cytokines. (Gronert et al., J. Exp. Med., 187:1285- 1294 (1998)). Our previous study demonstrated that CD3 human peripheral blood T lymphocytes were induced by SAA to migrate and adhere to endothelial cell monolayers. (Xu et al., J. Immunol., 155:1184-1190 (1995)). In fact, we detected specific binding sites for 125 1-SAA on human peripheral blood CD3 T lymphocytes (Kd-300 nM, R-2200 sites/cell). Whether these binding sites on T lymphocytes represent FPRL1 or additional receptor(s) for SAA was not known until the present disclosure.
While the chemotactic formyl peptide fMLP has been shown to be a low efficiency agonist for FPRL1, a lipid metabolite lipoxin A4 (LXA4) has been reported to be a high affinity ligand and potent agonist for this receptor. (Fiore et al, J. Exp. Med., 180:253-260 (1994)). LXA4 is an eicosanoid generated during a number of host reactions such as inflammation, thrombosis and atherosclerosis (Romano et al., J. Immunol., 157:2149- 2154 (1994)), and was initially discovered as an inhibitor of immune response. (Reviewedin Samuelsson et al., Science, 237:1171-1176 (1987)). LXA4 was subquently reported to inhibit neutrophil chemotaxis (Lee et al., Biochem. Biophys. Res. Commun., 180:1416-1421 (1991)) and transepithelial migration induced by chemotactic agents. (Colgan et al., J. Clin. Invest., 92:75-82 (1993)). A seven transmembrane G-protein coupled receptor identical to FPRL1 was recently identified for LXA4. (Fiore et al, J. Exp. Med., 180:253-260 (1994); Takano et al., J. Exp. Med., 185:1693-1704 (1997); and Romano et al., J. Immunol., 157:2149-2154 (1994)). LXA4 bound with high affinity to CHO cells transfected with this receptor and increased GTPase activity and the release of esterified arachidonate. (Fiore et al, J. Exp. Med., 180:253-260 (1994)).
LXA4 has been proposed to be an endogenously produced ligand for FPRL1. (Fiore et al, J. Exp. Med., 180:253-260 (1994); and Takano et al., J. Exp. Med, 185:1693-1704 (1997)). Although LXA4 has not been WO 01/21188 PCT/US99/21770 reported to induce Ca 2 mobilization in neutrophils or FPRL1 transfected cells (Fiore et al, J. Exp. Med., 180:253-260 (1994)), it was shown to induce Ca 2 flux and chemotaxis in monocytes. (Maddox et al., J. Biol.
Chem., 272:6972-6978 (1997); and Romano at al., J. Immunol, 157:2149-2154 (1994)). In our present investigations, we did not detect a significant induction of Ca 2 flux or chemotaxis in FPRL11293 cells using commercially available LXA4 (Biomol, Plymouth Meeting, PA), nor did we observe inhibition of SAA signaling or binding by this LXA4 in either phagocytes or FPRL1/293 cells.
Our previous studies also demonstrated that both SAA-induced leukocyte chemotaxis and activation were inhibited by pertussis toxin. (Xu et al., J. Immunol., 155:1184-1190 (1995); and Badolato et al., J.
Immunol., 155:4004-4010 (1995)). Furthermore, we have shown that signaling of SAA through FPRL1 was sensitive to pertussis toxin. Although the signal transduction pathways triggered by the interaction of SAA with FPRL1 are not yet fully understood, we believe that FPRL1 receptors share biochemical pathways with FPR. It is well known, for example, that binding of FPR by bacterium-derived or synthetic peptide agonists result in a G protein-mediated signaling cascade leading to phagocytic cell adhesion, chemotaxis, release of oxygen intermediates, enhanced phagocytosis and bacterial killing, as well as gene transcription. (Prossnitz, E.R. and R.D. Ye, Pharmacol. Ther., 74:73-102 (1997); and Murphy, Chemoattractant ligands and their receptors, pp. 269 (1996)). Activation of FPR by its agonists can also result in heterologous desensitization of the subsequent cell response to other G-protein receptor ligands including chemokines. (Ali et al., J. Biol.
Chem., 268:24247-24254 (1993); and Ali et al., J. Bio. Chem., 271:3200-3206 (1996)). We believe that a similar "desensitizing" effect of receptor activation can be present with FPRL1.
For instance, SAA was initially reported as an inhibitor of neutrophil response to fMLP. (Linke et al., Biochem. Biophys. Res. Commun., 176:1100-1105 (1991)). In these experiments, neutrophils preincubated with SAA showed reduced superoxide release in response to fMLP. (Lnke at al., Biochem. Biophys. Res.
Commun., 176:1100-1105 (1991)). Our previous study also demonstrated that preincubation of monocytes and neutrophils with SAA reduced cell response to a number of chemoattractants including fMLP and chemokines.
(Badolato et al., J. Immunol., 155:4004-4010 (1995)). Accordingly, we believe that FPRL1 is capable of transducing intracellular biochemical responses leading to desensitization of other G-protein coupled receptors.
The optimal concentrations for SAA to induce leukocyte migration, adhesion and tissue infiltration range from 0.8 4 pM (Badolato et al., J. Exp. Med., 180:203-209 (1994); Xu et al., J. Immuno., 155:1184.
1190 (1995); and Badolato et al., J. Immunol, 155:4004-4010 (1995)), which are higher than the SAA levels present in normal serum but well below the concentration seen during a systemic acute phase response. (Sipe, Immunophysiology: The role of cells and cytokines in immunity and inflammation, 259-273 (1990); Kisilevsky, Medical Hypotheses, 35:337-341 (1991); Skinner, J. Inten. Med., 232:513-514 (1992); and Malle, E. and F.C. De Beer, Eur. J. Clin. Invest., 26:427435 (1996)). Increased serum levels of SAA have been observed in a number of inflammatory and infectious diseases as well as after organ transplantation. (Malle, E.
and F.C. De Beer, Eur. J. Clin. Invest., 26:427-435 (1996)). The over-production of SAA by hepatocytes can WO 01/21188 PCT/US99/21770 also be induced by inflammatory stimuli such as LPS, IL-1, IL-6 and TNF. (Sipe, Immunophysiology: The role of cells and cytokines in immunity and inflammation, 259-273 (1990); Kisilevsky, MedicalHypotheses, 35:337.341 (1991); Skinner, J. Inten. Med., 232:513-514 (1992); and Malle, E. and F.C. De Beer, Eur. J.
Clin. Invest., 26:427-435 (1996)). Additionally, macrophages have been reported to be an extra-hepatic source of SAA during inflammation (Steel et al., Scand. J. Immunol., 44:493-500 (1996)) and can produce relatively high concentractions in microcompartments. The SAA concentrations required for activating FPRL1 are well within the range in which native cells are activated as shown by the results presented herein The expression of SAA mRNA in human atherosclerotic lesions and the induction of SAA by oxidized low-density lipoproteins also support our belief that SAA plays an important role in vascular injury and atherosclerosis. (Malle, E. and F.C. De Beer, Eur. J. Clin. Invest, 26:427435 (1996)). Under normal conditions, most serum SAA will be associated with high density lipoprotein (HDL) which acts as a natural inhibitor of the chemotactic activity of SAA. (See Badolato et al., J. Exp. Med., 180:203-209 (1994); and Xu et al., J. Immunol., 155:1184-1190 (1995) and FIGURE 30). However, since SAA binds to HDL at equimolar ratios (Liang, J. and J.D. Sipe, J. Upid Res., 36:37-46 (1995)), a rapid increase in concentration of locally produced SAA can establish a gradient of free active SAA with consequent recruitment of leukocytes into inflammatory sites. Desirably, an increase in concentration of SAA at local inflammatory sites can activate leukocytes to remove pathogenic agents. Furthermore, signals triggered by activated FPRL1 can result in unresponsiveness of leukocytes to additional stimulation, thus sequestering the cells, limiting the degree of inflammation, and providing therapeutic benefit. In the following section, several nucleic acid-based embodiments are provided.
Modulation of assembly of the SAA/FPRL 1 complex using a nucleic acid agent Full-length SAA and FPRL 1 (nucleic acids are represented in italics) and fragments of these molecules that encode polypeptides that are involved in the assembly of the SAAIFPRL1 complex are embodiments of the invention. Further embodiments include nucleic acids that complement full-length SAA and FPRLI and molecules that complement nucleic acids that encode polypeptides that are involved in the assembly of the SAA/FPRL1 complex. Desired embodiments include nucleic acids having at least 9 consecutive bases of SAA or FPRL I or a sequence complementary thereto, wherein the nucleic acid encodes a polypeptide that is involved in the assembly of the SAA/FPRL1 complex or wherein the nucleic acid complements a nucleic acid that encodes a polypeptide that is involved in the assembly of the SAAIFPRL1 complex. Preferably, the nucleic acid embodiments comprise at least 12, 13, 14, 15, 16, 17, 18, or 19 consecutive nucleotides from SAA or FPRL1 or a nucleic acid that complements SAA or FPRL1, as conditions dictate. More preferably, the nucleic acid embodiments comprise at least 20-30 consecutive nucleotides from SAA or FPRL1 or a nucleic acid that complements SAA or FPRL 1. In some cases, the nucleic acid embodiments comprise more than 30 nucleotides from the nucleic acids encoding SAA or FPRL1 or a nucleic acid that complements these molecules and in other WO 01/21188 PCT/US99/21770 cases, the nucleic acid embodiments comprise at least 40, at least 50, at least 75, at least 100, at least 150, or at least 200 consecutive nucleotides from the nucleic acids encoding SAA or FPRL1 or a nucleic acid that complements these molecules.
The nucleic acid embodiments described above can be altered by mutation, such as substitutions, additions, or deletions, which provide for sequences encoding functionally equivalent molecules. Due to the degeneracy of nucleotide coding sequences, other DNA sequences that encode substantially the same SAA or FPRL1 amino acid sequence that is involved in the assembly of an SAAIFPRL1 complex can be used. These include, but are not limited to, nucleic acid sequences comprising all or portions of SAA or FPRL1 or nucleic acids that complement all or part of SAA or FPRL 1 that have been altered by the substitution of different codons that encode a functionally equivalent amino acid residue within the sequence, thus producing a silent change. Further, the nucleic acid embodiments of the invention can be used to modulate assembly of an SAA/FPRL1 complex andlor signal transduction by upregulating or downregulating the expression of SAA or FPRLI) and, therefore, have several uses in biotechnological research and the treatment and prevention of disease. In the section below, several protein-based embodiments are provided.
Modulation of assembly of the SAA/FPRL I complex using a peptide agent In several embodiments of the present invention, SAA and FPRL1 andlor fragments thereof are incorporated into biotechnological tools and pharmaceuticals for therapeutic and prophylactic application.
Preferably, the SAA and FPRL1 peptides andlor fragments thereof correspond to sequences involved in assembly of the SAAlFPRL1 complex andlor SAAFPRL1 -mediated signal transduction. Desirable peptides are between three amino acids and 100 amino acids in length and have at least some portion of the sequence of a peptide that is involved in assembly of the SAAIFPRL1 complex andlor SAA/FPRL1-mediated signal transduction. Additionally, peptidomimetics that resemble SAA and FPRL1 and fragments thereof or peptides of between three and 100 amino acids having sequence involved in assembly of theSAAIFPRLI complex andlor SAA/FPRL1-mediated signal transduction, are embodiments of the present invention. For example, an oligopeptide for use in aspects of the present invention can have three amino acids, four amino acids, five amino acids, six amino acids, seven amino acids, eight, nine, ten, eleven, twelve, thirteen, fourteen, fifteen, sixteen, seventeen, eighteen, nineteen, twenty, twenty-one, twenty-two, twenty-three, twenty-four, twentyfive, twenty-six, twenty-seven, twenty-eight, twenty-nine, thirty, thirty-one, thirty-two, thirty-three, thirtyfour, thirty-five, thirty-six, thirty-seven, thirty-eight, thirty nine, or forty or fifty or sixty or seventy or eighty or ninety or one-hundred amino acids. Similarly, peptidomimetics of the present invention can have structures that resemble three amino acids, four amino acids, five amino acids, six amino acids, seven amino acids, eight, nine, ten, eleven, twelve, thirteen, fourteen, fifteen, sixteen, seventeen, eighteen, nineteen, twenty, twentyone, twenty-two, twenty-three, twenty-four, twenty-five, twenty-six, twenty-seven, twenty-eight, twentynine, thirty, thirty-one, thirty-two, thirty-three, thirty-four, thirty-five, thirty-six, thirty-seven, thirty-eight, thirty nine, or forty or fifty or sixty or seventy or eighty or ninety or one-hundred amino acids.
WO 01/21188 PCT/US99/21770 Peptides for use in aspects of the present invention can also be modified, the peptides can have substituents not normally found on a peptide or the peptides can have substituents that are normally found on the peptide but are incorporated at regions of the peptide that are not normal. The peptides for use in aspects of the present invention can be acetylated, acylated, or aminated, for example. Substituents which can be included on the peptide so as to modify it include, but are not limited to, H, alkyl, aryl, alkenyl, alkynl, aromatic, ether, ester, unsubstituted or substituted amine, amide, halogen or unsubstituted or substituted sulfonyl or a or 6 member aliphatic or aromatic ring. As used throughout this disclosure, the term "peptide agent" refers to a modified or unmodified peptide and a chemical or a peptidomimetic that structurally (three-dimensionaly or two-dimensionally) resembles a modified or unmodified SAA or FPRL1 or a fragment of these molecules.
Peptide agents also include ligands identified by the methods of rational drug design detailed below.
The SAA and FPRL1 peptides and fragments or derivatives thereof, include but are not limited to, those containing as a primary amino acid sequence all or part of the amino acid sequence of SAA and FPRL1 found in nature. Additionally, altered sequences in which functionally equivalent amino acid residues are substituted for residues within the sequence resulting in a silent change can also be present in the peptides of the invention. Accordingly, one or more amino acid residues within the sequence can be substituted by another amino acid of a similar polarity that acts as a functional equivalent, resulting in a silent alteration. Substitutes for an amino acid within the sequence can be selected from other members of the class to which the amino acid belongs. For example, the non-polar (hydrophobic) amino acids include alanine, leucine, isoleucine, valine, proline, phenylalanine, tryptophan, and methionine. The uncharged polar neutral amino acids include glycine, serine, threonine, cysteine, tyrosine, asparagine and glutamine. The positively charged (basic) amino acids include arginine, lysine, and histidine. The negatively charged (acidic) amino acids include aspartic acid and glutamic acid. The aromatic aminoacids include phenylalanine, tryptophan, and tyrosine. In other aspects of the invention, SAA and FPRL1 and fragments or derivatives thereof, which are differentially modified during or after translation, by phosphorylation, glycosylation, cross-linking, acylation, proteolytic cleavage, linkage to an antibody molecule, membrane molecule, or other ligand, are contemplated. (Ferguson et al., Ann. Rev.
Biochem. 57:285-320 (1988)).
Many embodiments of the invention involve SAA or fragments of SAA or the use of these polypeptides or peptidomimetics that resemble the structures (collectively referred to as "peptide agents").
The polypeptide sequence of recombinant human SAA (rhSAA) is: WO 01/21188PCUS9217 PCT/US99/21770 MRS FFSFLGEAFOGAROMWRAYSDMREANYIGSD KYFHA RGNYDAAKRGPGGVWAAEAISNARENI QRFFGRGAEDS LADOIAANEWGFISGKDPNHFRPAGLPEKY (SEQ. ID. No. 1).
Carboxy truncations of SAA include:
MRS
MRSF (SEG. ID. NO, 2) MRSFF (SEQ. 10. NO. 3) MRSFFS (SEQ. 10. NO. 4) MRSFFSF (SEQ. 1D. NO. MRSFFSFL (SEQ. 1D. NO. 6) MRSFFSFLG (SEQ. ID. NO. 7) MRSFFSFLGE (SEQ. ID. NO. 8) MRSFFSFLGEA (SEG. 10. NO. 9) MRSFFSFLGEAF (SEQ. ID. NO. MRSFFSFLGEAFIJ (SEQ. ID. NO. 11) MRSFFSFLGEAFOG (SEQ. ID. NO. 12) MRSFFSFLGEAFOGA (SEG. 10. NO. 13) MRSFFSFLGEAFDGAR (SEQ. 10. NO. 14) MRSFFSF[GEAFDGARD (SEQ. 10. NO. MRSFFSFLGEAFDGARDM (SEQ. 10. NO. 16) MRSFFSFLGEAFDGARDMW (SEQ. ID. NO. 17) MRSFFSFLGEAFDGARDMWR (SEQ. ID. NO. 18) MRSFFSFLGEAFDGARDMWRA (SEQ. ID. NO. 19) MRSFFSFLGEAFDGARDMWRAY (SEQ. ID. NO. MRSFFSFLGEAFDGARDMWRAYS (SEQ. ID. NO. 21) MRSFFSFLGEAFDGARDMWRAYSD (SEQ. 10. NO. 22) MRSFFSFLGEAFDGARDMWRAYSDM (SEQ. ID. NO. 23) MRSFFSFLGEAFOGAROMWRAYSOMR (SEQ. 10. NO. 24) WO 01/21188 WO 0121188PCTIUS99/2 1770 MRSFFSFLGEAFOGAROMWRAYSOMRE MOE. 10. NO. MRSFFSFLGEAFDGARIJMWRAYSDM REA (SEQ. 10. NO. MRSFFSFLGEAFDGARIJMWRAYSDMREAN (SEQ. ID. NO. 27) MRSFFSFLGEAFDGARIJMWRAYSIJMREANY (SEQ. ID. NO. 28) MRSFfSFLGEAFDGARDMWRAYSOMREANYI (SEO. 10. NO. 29) MRSFFSFLGEAFOGARIJMWRAYSJMREANYIG (SEG. 10. NO. MRSFFSFLGEAFDGARDMWRAYSDMREANYIGS (SEQ. ID. NO. 31) MFISFFSFtGEAFDGAROMWRAYSDMREANYIGSD (SEQ. ID. NO. 32) MFISFFSFLGEAFDGARDMWRAYSIJMREANYI6SDK (SEQ. 10. NO. 33) MRSFFSFLGEAFDGARDMWRAYSJMREANYIGSDKY (SEQ. 10. NO. 34) MRSFFSFLGEAFDGARDMWRAYS)MREANYIGSDKYF (SEQ. ID. NO. MRSFFSFLGEAFDGARDMWRAYSJMREANYIGSDKYFH (SEO- ID. NO. 36) MRSFFSFLGEAFD6ARDMWRAYSDMREANYIGSDKYFHA (SEQ. ID. NO. 37) MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSOKYFHAR (SEQ. 10. NO. 38) MRSFFSFLGEAFD6ARIJMWRAYS]MREANYIGSDKYFHARG (SEQ. 10. NO. 39) MRSFFSFLGEAFDGAROMWRAYSJMREANYIGSDKYFHARGN (SEQ. 10. NO. MRSFFSFLGEAFDGARDMWRAYSOMREANYIGSDKYFHARGNY (SEQ. 10. NO. 41) MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYD ISEQ 10. NO. 42) MRSFFSFLGEAFDGARDMWRAYSOMREANYIGSDKYFHARGNYDA (SEQ. ID. NO. 43) MRSFFSFLGEAFDGARDMWRAYSJMREANYIGSDKYFHARGNYDAA (SEG. ID. NO."4) MRSFFSFLGEAFDGARDMWRAYSOMREANYI3SDKYFHAIIGNYDAAK (SEQ. ID. NO. MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSKYFHARGNYDAAK I(SEQ. 10. No. 46) MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRG (SEQ. 1D. NO. 47) MRSFFSFLGEAFDGARDMWRAYSJMREANYIGSKYFHAIGNYDAAKRGIP (SEQ. 1D. NO. 48) MRSFFSFLGEAFDGARDMWRAYSJMREANYIGSDKYFHAIIGNYDAAKRGPG (SEQ. ID. NO. 49) MRSFFSFLGEAFDGAHDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGG (SEQ. ID. NO. MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGV (SEQ. 10. NO. 51) WO 01/21188 WO 0121188PCT/US99/2 1770 MRSFFSFLGEAFDGARDMWRAYSOMREANYIGSOKYFHARGNYDAAKRGPGGVW (SEQ. ID. NO. 52) MRSFFSFLf3EAFDGARDMWRAYSDMREANYIGSDKYFHARGNYBAAKRGPGGVWA (SEG. ID. NO. 53) MRS FFSFLGEAFDGAR D MWRAYSDM REANYIGSO KYFHARGNYDAAKRG PG GVWAA (SEQ. ID. NO. 54) MRSFFSFLGEAFD GAR DMWRAYSDM REANYI GSDKYFHARGNYDAA KRG PG GVWAAE (SEQ. ID. NO. MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEA (SEQ. ID. NO. 56) MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAI (SEQ. 10. NO. 57) MRSFFSFLGEAFO GAR DMWRAYS DMREANYI GSD KYFHARGNYDAA KRGPG GVWAAEAIS (SEQ. 10. NO. 58) M RSFFS FLGEAFD GAR DMWRAYSDMREANYI GSDKYFHARGNYDAAKRGPGGVWAAEAISN (SEQ. ID. NO. 59) MRSFFSFLGEAFIJGARDMWRAYSDMREANYIGSDKYFHAR3NYDAAKRGPGGVWAAEAISNA (SEQ. ID. NO. MRSFFSFLGEAFDGARiDMWRAYSDMREANYIGSOKYFHARGNYDAAKRGPGGVWAAEAISNAR (SEQ. ID. NO. 61) MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARE (SEQ. ID. NOl. 62) MRSFFSFLGEAFDGARDMWRAYSOMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNAIIENI (SEQ. 10. NO.
63) MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQ (SEQ. I0. NO.
64) MRSFFSFLGEAFDGAIIDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGP3GVWAAEAISNAIENIQR (SEG. ID.
NO.565) M RSFFSFLGEA FD GAR DMWRAYS DMREANYI6SO KYFHARG6NYDAAKRGPG GVWAAEAISNARENI ORF (SEQ. ID.
NO. 66) MRSFFSFLGEAFD)GARDMWRAYSDMREANYIGSOKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFF (SEQ. ID.
NO. 67) MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFG (SEQ.
10. NO. 68) MRSFFSFLGEAFO GAR DMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPG GVWAA EAISNARENIORFFGR (SEQ.
NO. 69)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIORFFGRG
(SEQ. 10. NO.
MRSFFSFLGEAFDGARIJMWRAYSOMREANYIGSDKYFHARGNYIJAAKRGPGGVWAAEAISNARENIURFFGRGA
(SEQ. ID. NO. 71) MRS FFSFLGEAFO GAROMWRAYSDMREANYIS DKYFHAR GNYOAAKRGPGGVWAA EAISNARENI(IRFFGIGAE (SEQ. ID. Nfl. 72) WO 01/21188 PCT/US99/2 1770
MRSFFSFLGEAFDGAROMWRAYSDMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENIORFFGRGAED
(SEG. 10. NO. 73) MRSFFSFLGEAFDGARDMWRAYSCMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENiaRFFGRGAEDS (SEQ. 10. NO. 74)
MRSFFSFLGEAFDGARDMWRAYSUMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENI(IRFFGRGAEDS
L (SEQ. 10. NO. MRSFFSFLGEAFtJGARDMWRAYSOMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENIQRFFGRGAEOS LA (SEQ. ID. NO. 76) MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIaRFFGRGAEDS LAD (SEQ. ID. NO. 77) MRSFFSFLGEAFDGARIJMWRAYSDM REANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEIJS LADQI (SEQ. 10. NO. 78)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDS
LADGA (SEQ. ID. NO. 79)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDS
LADOAA ISEQ ID. NO. MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHAR GNYDAAKRGPE3GVWAAEAISNARENIQRFFGRGAEDS LADGAAN (SEQ. ID. NO. 81)
MRSFFSFLGEAFDGARDMWRAYSOMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDS
LADDAANE (SEQ. 10. NO. 82)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDS
LADQIAANEW (SEQ. 10. NO. 83)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDS
LADQAANEWG (SEQ. ID. NO. 84)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDS
LADOAANEWGR (SEQ. 1D. NO.
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDS
LADDAANEWGRS (SEQ. 10. NO. 86)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDS
LADQAANEWGRSG (SEQ. 10. NO. 87) MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENI QRFFGRGAEDS LADQIAANEWGRSGK (SEQ. 10. NO. 88)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDS
LADQAANEWGRSGKD (SEQ. ID. NO. 89)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDS
[ADDIAANEWGRSGKDP (SEQ. ID. NO. 17 WO 01/21 188PCIS/170 PCTIUS99/21770 MRS FFSFLG EAFDGA ROMWRAYSOMREANYIGS DKYFHARGNYOAAKRG PGGVWAAEAISNA RENIOR FFGRGAEDS LADOIAANEWGRSGKDPN (SEQ. ID. NO. 91) MRS FFSFLG EAFDI3ARDMWRAYSOMREANYIGSD KYFHAR GNYBAAKR GPGGVWAAEAISNARENIUR FFGRGAEDS LADQIAANEWGRSGKDPNH (SEQ. ID. NO. 92)
MRSFFSFLGEAFDGARDMWRAYSOMREANYIGSDKYFHARGNYOAAKHGPGGVWAAEAISNARENIQRFFGRGAEDS
LADQAANEWGRSGKDPNHF (SEQ. ID. NO. 93)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENIQRFFGRGAEDS
LADOLAANEWGRSGKOPNHFR (SEU. ID. NO. 94)
MRSFFSFLGEAFOGARDMWRAYSDMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENIQRFFGRGAEOS
LAOQIAANEWGRSGKDPNHFRP (SEQ. 10. NO.
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIORFFGRGAEOS
LADQIAANEWGRSGKDPNHFRPA (SEQ. ID). NO. 96)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEUS
LADQAANEWGRSGKOPNHFRPAG (SEQ. ID. NO. 97) MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKFIGPGGVWAAEAISNARENiaRFFGRGAEDS LADQ[AANEWGRSGKOPNHFRPAGL (SEQ. ID. NO. 98)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEJS
LADQIAANEWGRSGKDPNHFRPAGLP (SEQ. ID. NO. 99)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIORFFGRGAEDS
LADQIAANEWGRSGKDPNHFRPAGLPE (SEQ. 10. NO. 100)
MRSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDS
LADQIAANEWGRSGKDPNHFRPAGLPEK (SEQ. 10. NO. 101) Amino truncations of SAA include: RSFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKHGPGGVWAAEAISNARENiaRFFGRGAEDSL ADOIAANEWGRSGKDPNIIFRPAGLPEKY (SEQ. 10. NO. 102)
SFFSFLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENIORFFGRGAEDSLA
OAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 103) FFSFLGEAFDGARDMWRAYSDMREANYIGSD KYFHARGNYDAAKRGPGGVWAAEAISNARENIORFFGRGAEDSLAD (IAANEWGRSGKIJPNHFRPAGLPEKY (SEQ. 10. NO. 104) FSFLGEAFDGARDMWRAY SDMREANYIGSOKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADDI AANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 105) SFLGEAFDGARDMWRAYSDMREANYIGS0KYFHARGNYDAAKRG PGGVWAAEAISNARENIORFFGRGAEOSLA BOA ANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 106) F[GEAFDGARDMWRAYSDMREANYlGSDKYFHARGNYDAAKRlGPGGVWAAEAISNARENIORFFGRGAEDSLADaAA NEWGRSGKDPNHFRPAGLPEKY (SEG. 10. NO. 107) 18 WO 01/21188 WO 0121188PCTIUS99I2 1770 LGEAFO GARD MWRAYSOM REANYIGSOKYFHA RGN YDAAKRGPGGVWAAEAISNARENI (RFFGRGAEDSLAD AA NEWGRSGKOPNHFRPAGLPEKY (SEQ. 10). NO. 108)
GEAFDGARDMWRAYSOMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLAOQAAN
EWGRSGKDPNHFRPAGLPEKY (SEQ. 1D. NO. 109)
EAFI)GAIIDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENI(IRFFGRGAEDSLAOAANE
WGRSGKOPNHFRPAGLPEKY (SEQ. 1D. NO. 110) AFDGARDMWRAYS0MREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDSLADQIAANEW GRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 111)
FDGARDMWRAYSOMREANYIGSIIKYFHARGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDSLAOQIAANEWG
RSGKIJPNHFRPAGLPEKY (SEQ. ID. NO. 112) DGAROMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEOSLAfJQAANEWGR SGKDPNHFRPAGLPEKY (SEQ. 10. NO. 113) CAROM WRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENI(IRFFGRGAEDSLADOIAANEWGRS GKOPNHFRPAGLPEKY (SEQ. 10. ND. 114) ARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIaRFFGRGAEDSLADDIAANEWGRSG KDPNHFRPAGLPEKY (SEQ. 10. NO. 115)
ROMWRAYSOMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADQIAANEWGRSGK
OPNHFRPAGLPEKY (SEQ. 1D. NO. 116)
OMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEOSLADOAANEWGRSGKO
PNHFRPAGLFEKY (SEQ. ID. NO. 117) MWRAYSDMREANYIGSDKYFHAR6NYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADQAANEWGRSGKDP NHFRPAGLPEKY (SEQ. 10. NO. 118)
WIIAYSDMREANYIGSIJKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADOIAANEWGRSGKDPN
HFRPAGLPEKY (SEQ. 1D. ND. 119)
RAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADOIAANEWGRSGKDPNHF
RPAGLPEKY (SEQ. 1D. NO. 120)
YSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDS[ADOIAANEWGRSGKDPNHFRP
AGIPEKY (SEQ. 1D. NO. 121) SOMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIaRFFGR6AEDSLADOAANEWGRSGKDPNHFRPA GIPEKY ISEM 10. NO. 122) DMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADOIAANEWGRSGKDPNHFH PAD LPEKY (SEQ. ID. NO. 123)
MREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIDRFFGRGAEOSLADQIAANEWGRSGKDPNHFRPAGL
PEKY (SEQ. 1D. NO. 1241 WO 01/21188 PCTIUS99/21770
REANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIORFFGRGAEDSLADQAANEWGRSGKDPNHFRPAGLP
EKY (SEG. 10. NO. 125) EANY[GSOKYFHARG NYDAAKRGPG GVWAAEAIS MAR ENIQR FFGR GAEIJSLADQAANEWGRS G KOPNH FRPAG LPE KY (SEQ. 10. NO. 126) ANYIGSOKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFF6RGAEDSLADDIAANEWGRSGKDPNHFRPAGLPEK Y (SEQ. ID. NO. 127) NYIGSDKYFHARGNYDAAKRGP6GVWAAEAISNARENIQIRFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 128) YIGSDKYFHARGNYDAAKRGPt3GVWAAEAISNARENIQRFFGRGAEDSLAD(IAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 129)
IGSDKYFHARGNYIJAAKRGPGGVWAAEAISNARENIORFFGRGAEDSLADQ[AANEWGRSGKOPNHFIPAGLPEKY
(SEQ. 10. NO. 130) GSD KYFHAFGNYIAAKRGPGGVWAAEASNARENIQRFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 131) SDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDISLADQIAANEWGRSGKDPNHFRPAGLPEKY
(SEQ.
NO. 132) OKYFHARGNYDAAKRGPG SVWAAEAISNARENIQRFFGFIGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ.
NO. 133) KYFHARGNYDAAKRGPGGVWAAEAISNARENIQHRFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY
(SEQ.
ID. NO. 134) YFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. in.
NO. 135) FHARGNYDAAKRGPGCVWAAEAISNARENIORFFGRGAEOSLAOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. NO. 136) HARI3NYDAAKRGPGGVWAAEAISNARENIC.RFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID.
NO. 137) AFIGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADQAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 1D. NO.
138) RGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDSLADQAANEWGFISGKOPNHFRPAGLPEKY (SEQ. Ia. NO.
139) GNYDAAKRGPGGVWAAEAISNARE NIOR FFGRGAEDS LAD (AANEWGRSGKDPNHFRPAG LPEKY (SEQ. ID. Na.
140) NYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADOIAANEWGRSGKDPJHFRPAGLPEKY (SEQ. ID. NO. 141) YDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADQAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 142) DAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 143) WO 01/21188 WO 0121188PCTIUS99/2 1770 AAKRGPGGVWAAEAISNARENIGRFFGRGAEOSLAOQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 144) AKRGPGGVWAAEAISNARENIORFFGRGAEDSLABOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 145) KRGPGGVWAAEAISNARENI(IRFFGRGAEDSLADOLAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 146) RGPGGVWAAEAISNARENIQRFFGRGAEOSLADQIAANEWGRSGKOPNHFIPAGLPEKY (SEQ. ID. NO. 147) GPGGVWAAEAISNARENIQIRFFGRGAEDSLADQAANEWGRSGKDPNHFRPAGLPEKY (SEOL 10. NO. 148) PGGVWAAEAISNARENIORFFGRGAEOSLAOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 149) GGVWAAEAISNARENIQRFFGRGAEOSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 1D. NO. 150) GVWAAEAISNARENIO.RFFGRGAEDSLAOQAANEWGRSGKOPNHFRPAGLPEKY (SECL 10. NO. 151) VWAAEAISNARENIQRFFGRGAEDSLAIJQAANEWGRSGKnPNHFRPAGLPEKY (SEQ. In. NO. 152) WAAEAISNARENIQRFFGRGAEOSLADQAANEWGF1SGKOPNHFRPAGLPEKY (SEG. ID. NO. 153) AAEAISNARENIQIRFFGRGAEDSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEG. In. NO. 154) AEAISNARENIQIRFFGRGAEDSLADQIAANEWGHSGKDFtgHFRPAGLPEKY (SEQ. 10. NO. 155) EAISNARENIQHRFFGRGAEDSLADQlAANEWGRSGKDPNHFRPAG[PEKY (SEQ. ID. NO. 156) AISNARENIQHRFFGRGAEDSLAD(IAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 157) ISNARENIQIRFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 1I3. NO. 158) SNARENIQIRFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 159) NARENIQRFFGRGAEDSLADOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 160) ARENIQRFFGRGAEDSLAD(IAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 161) RENIQHRFFGRGAEDSLADQIAANEWGRSGKDPJHFRPAGLPEKY (SEQ. 10. NO. 162) E NIQORFFGRGAED SLAIQAANEWGRS6KD PNHFRPAGLPEKY (SEQ. 10. NO. 163) NIO.RFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SED. 10. NO. 164) IQRFFGRGAEDSLADOIAANEWGRSGKDPNHFRPA3LPEKY (SEQ. ID. NO. 165) QIRFFGRGAEDSLADQIAANEWGRSGKOPNHFRPAGLPEKY (SEQ. 10. NO. 166) RFFGRGAEDSLADQAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 167) FFGRGAEDSLAOQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 168) GRGAEDSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 169) WO 01/21188 WO 0121188PCTIUS99/2 1770 RGAEOSLADQAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 170) GAEOSLADQAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 1711 AEDSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEC. 10. NO. 172) EDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEG. 10. NO. 173) DSLADQAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 174) SLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEG. ID. NO. 175) LADAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 176) ADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 1ID. NO. 177) DQAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 178) OAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 179) AANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 180) ANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 181) NEW(SRSGKOPNHFRPAGLPEKY (SEQ. ID. NO. 182) EWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 183) WGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 184) GRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 185) RSGKDPNHFRPAG[PEKY (SEQ. ID. ND. 186) SGKDPNHFRPAGLPEKY (SEQ. 10. NO. 167) GKDPNHFRPAGLPEKY (SEQ. ID. NO. 188) KDPNHFRPAGLPEKY (SEQ. 1D. NO. 189) DPNHFRPAGLPEKY (SEQ. ID. NO. 190) PNHFRPAGLPEKY (SEQ. 10. NO. 191) NHFRPAGLPEKY (SEQ. 10. NO. 192) HFRPAGLPEKY (SEQ. 10. NO. 193) FRPAGLPEKY (SEQ ID. NO. 194) RPAGLPEKY (SEQ. 10. ND. 195) PAGIPEKY (SEG. ID. NO. 196) WO 01/21188 WO 01/1 188PCT/US99/2 1770 AGIPEKY (SEG. 10. NO. 197) GIPEKY (SEQ. 10. NO. 198) IPEKY (SEG. ID. NO. 199) PEKY (SEQ. 10. NO. 200)
EKY
Internal truncations of SAA include: *RSF- and -RSF-5.105 wherein 5-105 means F, FS, FSF,..
FLGEAFOBARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEOSLAOOAA
NEWGRSGKDPNIIFRPAGLPEKY (SEQ. ID. NO. 201) .SFF. and -SFF-5-105 wherein 5-105 means S, SF, SIFL,..
GEAFOGARDMWRAYSDMREANYIGSDKYFHARGNYOAAKRGPGGVWAAEAISNARENIORFFGRGAEDSLADQAAN
EWGRSI3KDPNHFRPAGLPEKY (SEQ. 10. NO. 202) *FFS- and -FFS515-O wherein 5-105 means F, FL FLG,..
FLGEAFDGARDMWRAYSDMREANYIGSOKYFHARGNYJAAKR GPGGVWAAEAISNARENIQRFFGRGAEDSLADOAA NEWGRSGKOPNHFRPAGLPEKY (SEQ. ID. NO- 203) *FSF- and -FSF-5- 105 wherein 5-105 means L, LG, IGE,..
FSFLGEAFDGARDMWRAYSDMFIEANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEOSLADQI
AANEWGRSGKDPNHFRPAGLPEKY (SEO. ID. NO. 204) *SFL- and -SFL-5.105 wherein 5-105 means G, GE, GEA,..
SFLGEAFO GARDMWRAYS M REANYIGSDKYFHAR GNYDAAKRGPGGVWAAEAISNARENIQaRFFGRGAEDSLADBOA ANEWGRSGKDPNHFRPAGLPEKY (SEQ. I0. NO. 205) WO 01/21188 WO 0121188PCT/US99/2 1770 -FIG. and -F[G-5-105 wherein 5-105 means E, EA, EAF,..
FLGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIORFFGRGAEOSLADDAA
NEWGRSGKDPNHFRPAGLPEKY (SEO. ID. NO. 206) -LGE- and *LGE-5-105 wherein 5-105 means A, AF, AFD,..
LGEAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLAOOAA
NEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 207) *GEA- and -GEA.5.105 wherein 5-105 means F, FO, FOG,..
GEAFO GARD MWRAYSOMREANYIGSOKYFHARGNYDAA KRGPGGVWAAEAISNAR ENI(IRFFGRGAEOSLADOAAN EWGRSGKIJPNHFRPAGLPEKY (SEQ. 10. NO. 208) -EAF- and -EAF-5.105 wherein 5-105 means 0. DG, OGA,..
EAFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGP3GVWAAEAISNARENIORFFGRGAEDSLADQAANE WGRSGKDPNHFFIPAGLPEKY (SEa- ID. NO. 209) -AFO. and -AFD-5-105 wherein 5-105 means G, GA, GAR-.
AFDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIOIRFFGRGAEDSLADOAANEW
GRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 210) -FOG- and -FOG-5-105 wherein 5.105 means A, AR, ARO,..
FDGARDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIORFFGRGAEDSLADQlAANEWG RSGKDPNHFRPAGLPEKY (SEG. ID. NO. 211) *DGA- and -DGA-5-105 wherein 5-105 means R, RO, ROM,..
DGARDMWRAYSOMREANYIGSDKYFHARGNYD)AAKRGPGGVWAAEAISNARENIQRFFGRGAEOSLADOAANEWGR
SGKDPNHFRPAGLPEKY (SEQ. 1D. NO. 212) -GAR- and -GAR.5-105 wherein WO 01/21188 WO 0121188PCTIUS99/2 1770 5.105 means D, DM, 0MW,..
GAR DM WRAYSO MR EANYIGSOKYFHAR GNYDAAK RGPGGVWAAEAIS NARENIOIRFFGRGA EOS[ADGAANEWGRS GKDPNHFRPAGLPEKY (SEG. ID. NO. 213) *ARO- and -ARD-5-105 wherein 5.105 means M, MW, MWR,..
ARDMWRAYSDMREANYIGSD KYFHARGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDSLADOAANEWGRSG KDPNHFRPAGLPEKY (SEQ. ID. NO. 214) -ROM- and -RDM-5*105 wherein 5.10 5 means W, WR, WFIA,
RDMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLAD(AANEWGRSGK
IJPNHFRPAGLPEKY (SEQ. 1D. NO. 215) -0MW- and -OMW-5-105 wherein 5-105 means R, RA, RAY,.
DMWRAYSDMREANYIGSIJKYfHARGNYOAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDSLADQIAANEWGRSGKD PNHFRPAGLPEKY (SEQ. 10. NO. 216) -MWR- and -MWR-5-105 wherein 5.105 means A, AY, AYS,.
MWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADQAANEWGRSGKDP
NHFRPAG[PEKY (SEG. 10. NO. 217) *WRA- and -WRA-5-105 wherein 5-105 means Y, YS, YSD,..
WRAYSDMREANYIGSDKYFHARGNYDAAI(RGPGGVWAAEAISNARENIQRFFGRGAEOSLADOIAANEWGRSGKDPN
HFRPAGLPEKY (SEQ. 1D. NO. 218) 3D -RAY- and -RAY-S. 105 wherein 5.105 means S, SD, SDM,..
RAYSDMREANYIGSDKYFHAFIGNYDAAKRGPGGVWAAEAISNARENI(IRFFGRGAEDSLADOAANEWGRSGKDPNHF
RPAGLPEKY (SEQ ID. NO. 219) *AYS- and -AYS-5-105 wherein 5-105 means 0, DM, DMR,..
Wo 01/21188 WO 0121188PCT/US99/21770
AYSDMREANYIGSOKYFHARGNYDAAKRGPGGVWAAEAISNARENIURFFGRGAEDSLADOIAANEWGRSGKDPNHFR
PAGIPEKY (SEQ. ID. NO. 220) *YSD- and -YSD-5. 105 wherein 5-105 means M, MR, MRE,..
YSD MREANYI GSD KYFHARG NYOAA KRGPGGVWAAEAISNARENI (RFFGR GAEDS LAD OAANEWGRSGKDPNHFR P AGIPEKY (SEQ. 10. NO. 221) -SlIM- and -SDM-5-105 wherein 5-105 means R, RE, REA-.
SDMREANYIGSDKYFHARGNYDAAKRGP6GVWAAEAISNARENIORFFGRGAEDSLAIAANEWGRSGKDPNHFRPA GIPEKY (SEQ. ID. NO. 222) *DMR- and -DMR-5-105 wherein 5-105 means E, EA, EAN,..
IJMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENI aRFFGRGAEDSLADOIAANEWGRSGKDPNHFRPAG LPEKY (SEQ. 11). NO. 223) -MRE- and -MRE-5.105 wherein 5-105 means A, AN, ANY,.
MREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADOIAANEWGRSGKOPNHFRPAGL
PEKY (SEQ. ID. NO. 224) *REA- and -REA-5-105 wherein 5-105 means N, NY, NYI,..
REA NYI GSDKYFHARGNYDAAKR GPGGVWAAEAISNAH ENIQIRFFGR GAEDSLA DOAANEWGRSGKDPN HFRPAG LP EKY (SEQl. ID. NO. 225) *EAN- and -EAN-5.105 wherein 5-105 means Y, YI, YIG,..
EANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDSLADOIAANEWGRSGKDPNHFRPAGLPE
KY (SEQ. ID. NO. 226) -ANY- and -ANY-5-lOS wherein 5-105 means 1, IG, IGS,..
WO 01/21188 WO 0121188PCT/US99/21770
ANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIORFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEK
Y (SEO. ID. NO. 227) -NYI. and -NYI-5-105 wherein 5-105 means G, GS, GSD,..
NYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIORFFGRGAEDSLAD(IAANEWGRSGKDPNHFRPAGLPEKY
(SEG. 10. NO. 228) -VIG. and -YIG-5-105 wherein 5-105 means S, SO, SOK,..
YIISSDKYFHARGNYDAAKRGPGGVWAAEAISNARENI(IRFFGRGAEDSLA0OIAANEWGRSGKIJPNHFRPAGLPEKY (SEG. ID. NO. 229) -IGS- and -IGS-5.105 wherein 5-105 means 0, OK, DKY,..
IGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADAANEWGRSGKDPNHFRPAGLPEKY
(SECL ID. NO. 230) *GSD- and -GSD-5-105 wherein 5-105 means K, KY. KYF,..
GSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEOSLADOAANEWGRSGKDPNHFRPAGLPEKY
(SEQ. ID. NO. 231) -SilK- and -SDK-5-105 wherein 5-105 means Y, YF, YFH,..
SDKYFHARGNYDAAKRGPGGVWAAEAISNARENIURFFGRGAEOSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ.
ID. NO. 232) -0KY- and -DKY5-105 wherein 5-105 means F, FII, FHA,..
0 KYFHARGNY DAAKRGPGGVWAAEAIS NARENIOR FFGRGAEDS LAD GAANEWGRSG KDPN HFR PAGLPEKY (SEQ.
NO. 233) -KYF- and -KYF-5-105 wherein 5-105 means H, HA, HAR,..
WO 01/21188 WO 0121188PCTIUS99/21 770 KYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEOSLAOQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ.
NO. 234) *YFH- and -YFH-5-105 wherein 5.105 means A, AR, ARG,..
YFHARGNYOAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEO. 1D.
NO. 235) *FHA. and -FHA-5-105 wherein 5-105 means R, HG, RGN,..
FHARGNYOAAKRGPGGVWAAEAISNARENIaHFFGRGAEDSLAOQIAANEWGRSGKDPNHFRPAGLPEKY (SEG. NO. 236) -HAR- and -HAR5.105 wherein 5-105 means G, GN, GNY,..
HARGNYDAAKRGPGGVWAAEAISNARENIORFFGRGAEDSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID.
NO. 237) *ARG- and -ARG5-105 wherein 5-105 means N, NY, NYD,..
ARGNYDAAKRGPGGVWAAEAISNAHENI(IRFFGRGAEDS[ADQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. No.
238) -HGN- and -RGN-5-105 wherein 5-105 means Y, YO, YDA,..
RGNYDAAKRGPGGVWAAEAISNARENIQIRFFGRGAEDSLAD(IAANEWGHSGKDPNHFRPAGLPEKY (SEQ. 10. NO.
239) *GNY- and -GNY-5-105 wherein 5-105 means D, DA, BAA,..
GNYDAAKRGPGGVWAAEAISNARENI(ORFFGRGAEDSLAOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO.
240) -NYD- and -NY-5-105 wherein 5-105 means A, AA, AAK...
NYDAAKHGPGGVWAAEAISNARENIOHRFFGHGAEDSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEO. 10. NO. 241) WO 01/21188 WO 01/1 188PCTIUS99121770 *YOA. and .YDA-5-1 05 wherein 5-105 means A, AK, AKR,..
YOAAKRGPGGVWAAEAISNARENIQRFFGRGAEDSLAOOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 242) *OAA- and -DAA-5.1O5 wherein 5.105 means K, KR, KRG,..
OAAKRGPGGVWAAEAISNARENIQRFFGRGAEOSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 1D. NO. 243) -AAK- and -AAK-5-105 wherein 5.105 means R, RG, RGP,..
AAKRf3PGGVWAAEAISNARENIORFFGRGAEDSLADOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 244) *AKR- and -AKR-5-105 wherein 5-105 means G, GP, GPG,..
AKRGPGGVWAAEAISNARENIQRFFGRGAEDSLAOOIAANEWGRSGKDPNHFRPAI3[PEKY (SED. ID. ND. 245) *KRG- and -KRG-5-1 O5 wherein 5-105 means P, PG, PMG.- KRGPGGVWAAEAISNARENIQlRFFGRGAED)SLADOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 245) -RGP. and -RGP5-105 wherein 5.105 means G, GG, GGV,..
RGPGGVWAAEAISNARENIORFFGRGAEOSLAOOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. Ia. NO. 247) -GPG- and .GPG-5.105 wherein 5.105 means G, GV, GVW,..
GPGGVWAAEAISNARENIORFFGRGAEDSLAD(IAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 248) -PGG. and .PGG.5-105 wherein 5-10 5 means V, VW, VWA,..
PGGVWAAEAISNARENIQIRFFGRGAEDSLADQIAANEWGRSGKOPNHFRPAGLPEKY (SEQ. I0. NO. 249) *GGV- and -GGV-5-105 wherein 5-105 means W, WA, WWA,..
GGVWAAEAISNARENIQIRFFGRGAEDSLADOAANEWGRSGKOPNHFRPAG[PEKY (SEO. I0. NO. 250) WO 01/21188 WO 0121188PCT/US99/2 1770 *GVW- and -GVW-5-1O5 wherein 5-105 means A, AA, AAE,..
GVWAAEAISNARENIORFFGRGAEDSLADOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. In. NO. 251) *VWA- and -VWA-5-105 wherein 5-105 means A. AE, AEA,..
VWAAEAISNARENiaRFFGRGAEOSLADaAANEWGRSGKOPNHFRPAGLPEKY (SEQ. ID. NO. 252) *WAA- and -WAA-5.105 wherein 5-105 means E, EA, EAI,..
WAAEAISNARENIORFFGRGAEDSLAIJQAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 253) *AAE- and -AAE-5-105 wherein 5-105 means A, AAIS,..
AAEAISNARENIDRFFGRGAEDSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEG. 10. NO. 254) *AEA- and -AEA5.105 wherein 5-105 means 1, IS, ISN, AEAISNARENIQRFFGRGAEOSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEG. I0. NO. 255) -EAI- and -EAI.5.105 wherein 5-105 means S, SN, SNA,..
EAISNARENIQIRFFGRGAEDSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. I0. NO. 256) *AIS. and .AIS-5-105 wherein 5-105 means N, NA, NAR...
AISNAIIENIaRFFGRGAEDSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 257) .ISN- and .ISN-5.105 wherein 5.105 means A, AR, ARE,.
ISNARENIQRFFGRGAEDSLADOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 258) -SNA- and -SNA-5.105 wherein 5.105 means R, RE, REN,..
SNARENIQRFFGRGAEDSLAOOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 259) WO 01/21188 WO 0121188PCTIUS99/2 1770 *NAR- and -NAR-5-105 wherein 5-105 means E, EN. ENI,..
NARENIQIRFFGRGAEOSLADOAANEWGRSGKOPNHFRPAGLPEKY (SEQ. ID. NO. 260) -ARE- and -ARE-5- 105 wherein 5.105 means N, NI. NiG,..
ARENIORFFGRGAEOSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 261) -REN- and .REN-5.105 wherein 5-105 means 1, ID, IOR,..
RENIQRFFGRGAEDSLAD(IAANEWGRSGKDPNHFRPAGLPEKY (SEG. ID. NO. 262) -ENI- and -ENI-5-1O5 wherein 5-105 means 0, OR, EQRF...
ENIQIRFFGRGAEDSLADIIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 263) -NID- and -NIG-5-1 05 wherein 5.105 means R, RF. RFF,..
NiaRFFGRGAEDSLADQIAANEWGRSGKOPNHFRPAGLPEKY (SEQ. 10. NO. 264) -IDA. and .IQR-5-1O5 wherein 5-105 means F, FF, FF6,..
IORFFGRGAEOSLAD(IAANEWGASGKDPNHFRPAGLPEKY (SEQ. ID. NO. 265) -OAF- and -QHF-5-105 wherein 5-105 means F, FG, FGR,..
QRFFGRGAEDSLADOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. I0. NO. 266) -RFF- and -RFF-5-105 wherein 5-105 means G, GR, GRG,..
RFFGRGAEDSLADQAANEWGRSGKDPJHFRPAGLPEKY (SEG. I0. NO. 267) -FFG- and -FFG-5-105 wherein 5-105 means R, RG, RGA,..
FFGRGAEDSLAOOlAANEWGRS3KDPNHFAPAGLPEKY (SEQ. ID. NO. 268) WO 01/21188 WO 0121188PCT/US99/21770 *FGR- and -FGR-5-1 05 wherein 5-105 means G, GA, GAE,..
FGRGAEDSLAOQIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 269) *GRG- and -GRG-5-105 wherein 5-105 means A, AE, AED,..
GRGAEDSLAD(IAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 2701 *RGA- and -RGA-5-105 wherein 5-105 means E, ED, EDS,.
RGAEDSLADJQAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 271) -GAE- and -GAE-5- 105 wherein 5-105 means 0, DS, DSL,.
GAEDSLADOAANEWGRSGKDPNHFRPAGLPEKY (SEO. 10. NO. 272) -AEO. and -AEO-5-105 wherein 5.105 means S, SL, SLA,..
AEDSLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 273) -EDS- and -EDS-5-105 wherein 5-105 means L, LA, LAO-.
EDSLAOQIAANEWGRSGKDPNHFRPAGLPEKY (SEO. ID. NO. 274) -OSI- and -DSL-5.105 wherein 5.105 means A, AD, ADO,..
OSLADQIAANEWGRSGKDPNHFRPAGLPEKY (SEG. ID. NO. 275) -SLA- and -SLA-5-105 wherein 5.105 means 0,D, DOA, SLADOIAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 276) -LAD- and -LAD-5-lOS wherein 5-105 means 0I. QA, b.AA,..
LAD(IAANEWGRSGKDPNHFRPAGLPEKY (SEQ. ID. NO. 277).
WO 01/21188 WO 0121188PCT/US99/21770 *ADQ- and -AOO-5-105 wherein 5-105 means A, A AAN,..
ADOAANEWGRSGKOPNHFRPAGLPEKY (SEQ. 10. NO. 278) -OGA- and .OOA-5-105 wherein 5-105 means A, AN, ANE-.
DOAANEWGRSGKDPNHFRPAGLPEKY (SEQ. 10. NO. 279) -OAA- and .QAA-5-105 wherein 5.105 means N, NE, NEW, OIAANEWGRSGKIJPNIIFRPAGLPEKY (SEQ. 10. NO. 280) -AAN- and .AAN-5-105 wherein 5-105 means E, EW, EWG,..
AAN'EWGRSGKOPNHFRPAGLPEKY (SEQ. 10. ND. 281) -ANE. and -ANE-5.105 wherein 5-105 means W, WG, WGR,..
ANEWGRSGKDPNHFRPAGLPEKY (SEG. ID. NO. 282) -NEW- and -NEW5.105 wherein 5.105 means G, GR, GAS,..
NEWGRSGKDPNHFRPAGLPEKY (SEO. 10. NO. 283) *EWG- and -EWG-5- 105 wherein 5-105 means R, AS, RSG,..
EWGRSGKIJPNHFRPAGLPEKY (SEQ. ID. NO. 284) *WGR- and -WGR-5-105 wherein 5-105 means S, SG, SGK,..
WGRSGKDPNHFRPAGLPEKY (SEQ. 1D. NO. 285) .GRS. and -GRS-5-105 wherein 5.105 means G, GK, GKD,..
GRSGKDPNHFRPAGLPEKY (SEQ. 1D. NO. 286) WO 01/21188 WO 0121188PCT/US99/2 1770 *RSG- and -RSG-5-105 wherein 5-105 means K, KO, KOP,..
RSGKOPNHFRPAGLPEKY (SEG. ID. NO. 2871 *SGK- and -SGK-5-105 wherein 5-105 means D, OP, DPN,..
SGKDPNHFRPAGLPEKY ISEQ 10. NO. 288) *GKD. and -GKD-5-105 wherein 5.105 means P, PN, PNH,..
GKDPNHFRPAGLPEKY (SEQ. 10. NO. 289) *KDP- and -KDP-5.1 05 wherein 5-105 means N, NH, NHF,..
KOPNHFRPAG[PEKY (SEQ. 10. NO. 290) -OPN- and -DPN-5-105 wherein 5.105 means H, HF, HFR,..
OPNHFRPAGLPEKY (SEQ. ID. NO. 291) *PNH- and -PNH-5-105 wherein 5-105 means F, FR, FRP,..
PNHFRPAGLPEKY (SEQ. 10. NO. 292) -NHF- and -NHF-5-105 wherein 5-105 means R, RP. RPA,..
NHFRPAGLPEKY (SEQ. 10. NO. 293) -HFR- and -HFR-5.105 wherein 5.105 means P, PA, PAG,..
HFRPAGLPEKY (SEG. ID. NO. 294) -FRP- and .FRP-5.105 wherein 5-105 means A, AG, AGL, FRPAGLPEKY (SEQ. ID. NO. 295) WO 01/21188 PCT/US99/21770 -RPA- and -RPA.5-105 wherein 5-105 means G, GL, GLP,...
RPAGLPEKY (SEQ. I0. NO. 296) -PAG- and -PAG-5-105 wherein 5-105 means L, LP, LPE,...
PAGLPEKY (SEQ. ID. NO. 297) -AGL- and -AGL-5-105 wherein 5-105 means P, PE, PEK,...
AGLPEKY (SEQ. ID. NO. 298) GLP- and -GLP-5-105 wherein 5-105 means E, EK, EKY,...
GLPEKY (SEQ. ID. NO. 299) -LPE- and -LEP-5-105 wherein 5-105 means K, KY LPEKY (SE. ID1. NO. 300) -PEK- and -PEK-5-105 wherein 5-105 means PEKY (SEQ. 10. NO. 301)
-EKY-
The peptides described above are preferably analyzed in SAA/FPRL1 characterization assays to determine their effect on the assembly of the SAAIFPRL1 complex and/or SAAIFPRL1-mediated signal transduction. One of skill in the art will appreciate that carboxy truncations, amino truncations, and internal truncations of the FPRL1 protein can be made in a similar fashion and these molecules can be characterized in SAAIFPRL1 characterization assays.
In many embodiments, we use isolated or purified SAA, FPRL1, or fragments thereof. The term "isolated" requires that the material be removed from its original environment the natural environment if it is naturally occurring). For example, a naturally occurring protein present in a living cell is not isolated, but the same protein, separated from some or all of the coexisting materials in the natural system, is isolated. The WO 01/21188 PCT/US99/21770 term "purified" does not require absolute purity; rather it is intended as a relative definition. For example, proteins are routinely purified to electrophoretic homogeneity, as detected by Coomassie staining, and are suitable in several assays despite having the presence of contaminants.
In the dislcosure below, we teach the preparation of multimeric supports having peptide agents that interact with FPRL1 or SAA and thereby modulate a cellular response. These multimeric supports have many uses including, but not limited to, the manufacture of biotechnological tools and components for pharmaceuticals, therapeutic and prophylactic agents.
Preparation of multimeric supports and multimerized ligands In order to be useful as a biotechnological tool or a component to a prophylactic or therapeutic agent, it is desirable to provide a peptide agent in such a form or in such a way that a sufficient affinity for FPRL1 or SAA is obtained. While a natural monomeric peptide agent SAA and fragments thereof appearing as discrete units of the peptide each carrying only one binding epitope) is sufficient to interact with FPRL1 and thereby modulate a cellular response, synthetic ligands or multimeric ligands SAA and fragments thereof appearing as multiple units of the peptide agent with several binding epitopes) can have far greater ability to interact with FPRL1 and thereby modulate a cellular response. It should be noted that the term "multimeric" is meant to refer to the presence of more than one unit of a ligand, for example several individual molecules of SAA or fragments thereof, as distinguished from the term "multimerized" which refers to the presence of more than one ligand joined as a single discrete unit, for example several molecules of SAA or fragments thereof joined in tandem.
A multimeric agent (synthetic or natural) that modulates a cellular response by effecting SAAIFPRL1 assembly or SAAIFPRL1-mediated signal transduction can be obtained by joining SAA or FPRL1, a fragment of SAA or FPRL1, or a peptidomimetic that resembles these molecules to a macromolecular support. A "support" can also be termed a carrier, a resin or any macromolecular structure used to attach or immobilize a peptide agent. Solid supports include, but are not limited to, the walls of wells of a reaction tray, test tubes, polystyrene beads, magnetic beads, nitrocellulose strips, membranes, microparticles such as latex particles, sheep (or other animal) red blood cells, artificial cells and others. The macromolecular support can have a hydrophobic surface that interacts with a portion of the peptide agent by hydrophobic non-covalent interaction.
The hydrophobic surface of the support can also be a polymer such as plastic or any other polymer in which hydrophobic groups have been linked such as polystyrene, polyethylene or polyvinyl. Alternatively, the peptide agent can be covalently bound to carriers including proteins and oligolpolysaccarides cellulose, starch, glycogen, chitosane or aminated sepharose). In these later embodiments, a reactive group on the peptide agent, such as a hydroxy or an amino group, can be used to join to a reactive group on the carrier so as to create the covalent bond. The support can also have a charged surface that interacts with the peptide agent.
Additionally, the support can have other reactive groups which can be chemically activated so as to attach a peptide agent. For example, cyanogen bromide activated matrices, epoxy activated matrices, thio and WO 01/21188 PCT/US99/21770 thiopropyl gels, nitrophenyl chloroformate and N-hydroxy succinimide chlorformate linkages, and oxirane acrylic supports are common in the art. (Sigma).
The support can also comprise an inorganic carrier such as silicon oxide material silica gel, zeolite, diatomaceous earth or aminated glass) to which the peptide agent is covalently linked through a hydroxy, carboxy or amino group and a reactive group on the carrier. Furthermore, in some embodiments, a liposome or lipid bilayer (natural or synthetic) is contemplated as a support and peptide agents are attached to the membrane surface or are incorporated into the membrane by techniques in liposome engineering. By one approach, liposome multimeric supports comprise a peptide agent that is exposed on the surface of the bilayer and a second domain which anchors the peptide agent to the lipid bilayer. The anchor can be constructed of hydrophobic amino acid residues, resembling known transmembrane domains, or can comprise ceramides that are attached to the first domain by conventional techniques.
Carriers for use in the body, for prophylactic or therapeutic applications) are desirably physiological, non-toxic and preferably, non-immunoresponsive. Suitable carriers for use in the body include poly-L-lysine, poly-D, L-alanine, liposomes, and Chromosorb' (Johns-Manville Products, Denver Ligand conjugated Chromosorb' (Synsorb-Pk) has been tested in humans for the prevention of hemolytic-uremic syndrome and was reported as not presenting adverse reactions. (Armstrong et al. J. Infectious Diseases 171:1042-1045 1995)). For some embodiments, a "naked" carrier lacking an attached peptide agent) that has the capacity to attach a peptide agent in the body of a subject is administered. By this approach, a "prodrug-type" therapy is envisioned in which the naked carrier is administered separately from the peptide agent and, once both are in the body of the subject, the carrier and the peptide agent are assembled into a multimeric complex.
The insertion of linkers, such as A linkers, of an appropriate length between the peptide agent and the support are also contemplated so as to encourage greater flexibility of the peptide agent and thereby overcome any steric hindrance that can be presented by the support. The determination of an appropriate length of linker that allows for an optimal cellular response or lack thereof, can be determined by screening the peptide agents with varying linkers in the assays detailed in the present disclosure.
A composite support comprising more than one type of peptide agent is also envisioned. A "composite support" can be a carrier, a resin, or any macromolecular structure used to attach or immobilize two or more different peptide agents that modulate a cellular response by effecting SAAIFPRL1 assembly or SAA/FPRL1-mediated signal transduction. In some embodiments, a liposome or lipid bilayer (natural or synthetic) is contemplated for use in constructing a composite support and peptide agents are attached to the membrane surface or are incorporated into the membrane using techniques in liposome engineering.
As above, the insertion of linkers, such as A linkers, of an appropriate length between the peptide agent and the support is also contemplated so as to encourage greater flexibility in the molecule and thereby overcome any steric hindrance that can occur. The determination of an appropriate length of linker that allows WO 01/21188 PCT/US99/21770 for an optimal cellular response or lack thereof, can be determined by screening the ligands with varying linkers in the assays detailed in the present disclosure.
In other embodiments of the present invention, the multimeric and composite supports discussed above can have attached multimerized ligands so as to create a "multimerized-multimeric support" and a "multimerized-composite support", respectively. A multimerized ligand can, for example, be obtained by coupling two or more peptide agents in tandem using conventional techniques in molecular biology. The multimerized form of the ligand can be advantageous for many applications because of the ability to obtain an agent with a better ability modulate assembly of the SAA/FPRL1 complex andlor SAA/FPRL1-mediated signal transduction and, thereby, effect a cellular response. We further contemplate that the incorporation of linkers or spacers, such as flexible A linkers, between the individual domains that make-up the multimerized agent can be advantageous. The insertion of A linkers of an appropriate length between protein binding domains, for example, can encourage greater flexibility in the molecule and can overcome steric hindrance. Similarly, the insertion of linkers between the multimerized ligand and the support can encourage greater flexibility and limit steric hindrance presented by the support. The determination of an appropriate length of linker that allows for an optimal effect on SAAIFPRL1 assembly or SAA/FPRL1-mediated signal transduction, can be determined by screening the ligands with varying linkers in the assays detailed in this disclosure.
In preferable embodiments, the various types of supports discussed above are created using SAA, FPHL1, a fragment of SAA or FPRL1, or a peptidomimetic that resembles these molecules. The multimeric supports, composite supports, multimerized-multimeric supports, or multimerized-composite supports, collectively referred to as "support-bound agents", are also preferably constructed using SAA, FPRL1, a fragment of SAA or FPRL1, or a peptidomimetic that resembles these molecules.
In the following section, we provide several assay methods, which are embodiments of the invention.
Methods to identify SAA/FPRL I assembly and agents that modulate SAA/FPRL I complex assembly We have discovered that SAA efficiently associates with FPRL1 to form a SAA/FPRL1 complex. The association of SAA to FPRL1 can be measured using many techniques common to molecular biology. By one approach, assembly of the SAAIFPRL1 complex is analyzed by contacting a support having FPRL1 or a representative fragment thereof with SAA or a representative fragment of SAA. If the SAA or fragment thereof is detectably labeled the association to immobilized FPRL1 (or FPRL1 fragment) can be directly determined by detecting the signal scintillation counting). Alternatively, the association of SAA or fragment thereof with FPRL1 can be determined indirectly by employing a detectably labeled antibody that has an epitope that corresponds to a region of SAA. In these assays, the support can be a resin, plastic, a membrane, a lipid, and a cell. Additionally, the SAA can be joined to a second support. Many SAA/FPRL1 characterization assays can be automated high throughput screening employing a fluorescently labeled SAA or fragment of SAA) so as to quickly identify regions of the molecule that are involved in binding to FPRL1. Values or results from these assays can be recorded on a computer readable media in a database) WO 01/21188 PCT/US99/21770 and analyzed with a search program and retrieval program. Of course, embodiments of the invention include the converse of the assay described above. That is, immobilizing SAA or fragments thereof on a support and detecting the adhesion of labeled FPRL1 or fragments of FPRL1.
Additional embodiments include methods of identifying agents that modulate assembly of the SAAIFPRL1 complex. By one approach, an agent that modulates assembly of the SAAIFPRL1 complex can be identified by contacting a support having FPRL1 or a representative fragment thereof with SAA or a fragment of SAA in the presence of the agent. Detection of SAA dependent adhesion is accomplished, as described above, and successful agents are identified according to their ability to induce a desired modulation of the formation of the SAA-FPRL1 complex. As above, the support can be a resin, a membrane, plastic, a lipid, or a cell and the SAA can be joined to a second support. In another approach, a support having SAA or a representative fragment thereof can be used to capture directly or indirectly labeled FPRL1 or fragments of FPRL1. In some aspects, the fragments of SAA that are used have a polypeptide sequence that binds to FPRL1 and is at least 80% homologous to SAA. As above, binding is conducted in the presence of the agent and SAA dependent adhesion to FPRL1 is determined by the amount of labeled FPRL1 bound to the immobilized SAA. In this method, the support can be a resin, a membrane, plastic, a lipid, and a cell and the FPRL1 can also be joined to a second support to approximate native binding conditions.
In a preferred approach, an agent that modulates assembly of the SAAIFPRL1 complex is identified using a cell-based assay. Accordingly, cells are transfected with a construct comprising a nucleic acid sequence encoding FPRL1 or a representative fragment thereof that is involved in the assembly of the SAAIFPRL1 complex. Transfectants are brought in contact with labeled SAA or a fragment thereof and, as above, binding is conducted in the presence of the agent. SAA dependent adhesion to FPRL1 is determined by the amount of labeled SAA bound to the FPRL1 expressing cells. Additionally, a two-support adhesion assay can be employed in which a first cell that expresses FPRL1 and a second support having SAA are contacted in the presence of a peptide agent. Accordingly, the inhibition of aggregation of the two supports in the presence of the peptide agent indicates that the agent is effective at disrupting assembly of the SAAIFPRL1 complex.
In some aspects of the invention, nucleic acids encoding SAA, nucleic acids complementary to SAA, SAA protein, and polypeptide fragments of SAA are agents that modulate inhibit or enhance) the formation of the SAA-FPRL1 complex. Several embodiments are provided that inhibit the association of SAA in a SAAIFPRL1 complex, for example, and thus, effect a cellular response. One embodiment of an SAAIFPRL1 inhibitory agent is an antisense oligonucleotide or ribozyme that hybridizes to nucleic acid encoding regions of SAA or FPRL1. By "antisense oligonucleotide" is meant a nucleic acid or modified nucleic acid including, but not limited to DNA, RNA, modified DNA or RNA (including branched chain nucleic acids and 2' O-methyl RNA) and PNA (polyamide nucleic acid).
Several ribozymes known to those of skill in the art can be easily designed to hybridize to nucleic acid sequence encoding SAA or FPRL1 and thereby inhibit the production of functional protein. Desirably, antisense oligonucleotides or ribozymes that hybridize to the start codon of SAA or FPRL1 are used. In one embodiment, WO 01/21188 PCT/US99/21770 full length antisense SAA is used to significantly reduced assembly of the SAA/FPRL1 complex. Many other antisense oligonucleotides or ribozymes that interfere with the assembly of the SAAIFPRL1 complex can be designed and screened by the methods detailed previously.
The antisense nucleic acids should have a length and melting temperature sufficient to permit formation of an intracellular duplex having sufficient stability to inhibit the expression of the mRNA in the duplex. Strategies for designing antisense nucleic acids suitable for use in gene therapy are disclosed in Green et al., Ann. Rev.
Biochem, 55:569-597 (19861 and Izant and Weintraub, Cell, 36:1007-1015 (1984). In some strategies, antisense molecules are obtained from a nucleotide sequence encoding SAA or FPRL1 by reversing the orientation of the coding region with respect to a promoter so as to transcribe the opposite strand from that which is normally transcribed in the celL Antisense molecules and ribozymes can be prepared by any method known in the art for the synthesis of RNA molecules. These include techniques for chemically synthesizing oligonucleotides such as solid phase phosphoramidite chemical synthesis.
Additionally, RNA molecules can be generated by in vitro and in vivo transcription of DNA sequences encoding SAA or FPRL1. Such DNA sequences can be incorporated into a wide variety of vectors with suitable RNA polymerase promoters such as T7 or SP6. Further, antisense cDNA constructs that synthesize antisense RNA constitutively or inducibly can be introduced into cell lines, cells or tissues. Still further, oligonucleotides that are complementary to the mRNA encoding SAA or FPRL1 can be synthesized in vitro. Thus, antisense nucleic acids are capable of hybridizing to SAA or FPRL1 mRNA to create a duplex. In some embodiments, the antisense sequences can contain modified sugar phosphate backbones to increase stability and make them less sensitive to RNase activity. Possible modifications include, but are not limited to, the addition of flanking sequences at the andlor 3' ends of the molecule or the use of phosphorothioate or 2' 0-methyl rather than phosphodiesterase linkages within the backbone of the molecule. This concept is inherent in the production of PNAs and can be extended in all of these molecules by the inclusion of nontraditional bases such as inosine, queosine and wybutosine as well as acetyl-, methyl-, thio- and similarly modified forms of adenine, cytidine, guanine, thymine, and uridine that are not as easily recognized by endogenous endonucleases. Further examples are described by Rossi et al., Pharmacol. Ther., 50(2):245-254, (1991).
Various types of antisense oligonucleotides complementary to the SAA or FPRL1 mRNA can be used. In one preferred embodiment, stable and semi-stable antisense oligonucleotides described in International Application No. PCT W094123026, hereby incorporated by reference, are used. In these molecules, the 30 end or both the and 50 ends are engaged in intramolecular hydrogen bonding between complementary base pairs. These molecules are better able to withstand exonuclease attacks and exhibit increased stability compared to conventional antisense oligonucleotides. In another preferred embodiment, the antisense oligodeoxynucleotides described in International Application No. WO 95104141 are used. In yet another preferred embodiment, the covalently cross-linked antisense oligonucleotides described in Intemational Application No. WO 96131523 are used. These double- or single-stranded oligonucleotides comprise one or more, respectively, inter- or intra-oligonucleotide covalent cross-linkages, wherein the linkage consists of an amide bond between a primary amine group of one strand and a carboxyl group of the WO 01/21188 PCT/US99/21770 other strand or of the same strand, respectively, the primary amine group being directly substituted in the 2' position of the strand nucleotide monosaccharide ring, and the carboxyl group being carried by an aliphatic spacer group substituted on a nucleotide or nucleotide analog of the other strand or the same strand, respectively.
The antisense oligodeoxynudeotides and oligonucleotides disclosed in International Application No. WO 92118522 can also be used. These molecules are stable to degradation and contain at least one transcription control recognition sequence that binds to control proteins and are effective as decoys therefor. These molecules can contain "hairpin" structures, "dumbbell" structures, "modified dumbbell" structures, "cross-linked" decoy structures and "loop" structures. In another preferred embodiment, the cyclic double-stranded oligonucleotides described in European Patent Application No. 0 572 287 A2 are used. These ligated oligonucleotide "dumbbells" contain the binding site for a transcription factor and inhibit expression of the gene under control of the transcription factor by sequestering the factor. Use of the closed antisense oligonucleotides disclosed in International Application No. WO 92119732, hereby incorporated by reference, is also contemplated. Because these molecules have no free ends, they are more resistant to degradation by exonudeases than are conventional oligonucleotides. These oligonucleotides can be multifunctional, interacting with several regions that are not adjacent to the target mRNA.
The appropriate level of antisense nucleic adds required to inhibit assembly of the SAAIFPRL1 complex can be determined using in vitro expression analysis and the SAAIFPRL1 characterization assays described herein.
The antisense molecule can be introduced into the cells expressing SAA or FPRL1 by diffusion, injection, infection or transfection using procedures known in the art. For example, the antisense nucleic acids can be introduced into the body as a bare or naked oligonucleotide, oligonucleotide encapsulated in lipid, oligonucleotide sequence encapsidated by viral protein, or as an oligonudeotide operably linked to a promoter contained in an expression vector. The expression vector can be any of a variety of expression vectors known in the art, including retroviral or viral vectors, vectors capable of extrachromosomal replication, or integrating vectors. The vectors can be DNA or
RNA.
The antisense molecules are introduced onto cell samples at a number of different concentrations preferably between 1x10 0 M to 1xlOM. Once the minimum concentration that can adequately control gene expression is identified, the optimized dose is translated into a dosage suitable for use in vivo. For example, an inhibiting concentration in culture of 1x10 7 translates into a dose of approximately 0.6 mglkg bodyweight. Levels of oligonucleotide approaching 100 mglkg bodyweight or higher can be possible after testing the toxicity of the oligonucleotide in laboratory animals. It is additionally contemplated that cells from a vertebrate, such as a mammal or human, are removed, treated with the antisense oligonucleotide, and reintroduced into the vertebrate.
Ribozymes can also be used to reduce or eliminate SAA or FPRL1 expression. Ribozymes are enzymatic RNA molecules capable of catalyzing the specific cleavage of RNA. The mechanism of ribozyme action involves sequence-specific hybridization of the ribozyme molecule to complementary target RNA, followed by endonucleolytic cleavage. Within the scope of aspects of the invention, are engineered hammerhead motif ribozyme molecules that can specifically and efficiently catalyze endonucleolytic cleavage of WO 01/21188 PCT/US99/21770 a sequence encoding SAA or FPRL1, for example. Specific ribozyme cleavage sites within any potential RNA target are initially identified by scanning the target molecule for ribozyme cleavage sites that include the following sequences, GUA, GUU and GUC. Once identified, short RNA sequences of between 15 and ribonucleotides corresponding to the region of the target gene containing the cleavage site can be evaluated for secondary structural features that can render the oligonucleotide inoperable. The suitability of candidate targets can also be evaluated by testing accessibility to hybridization with complementary oligonucleotides using ribonuclease protection assays. Delivery of antisense and ribozyme agents by transfection and by liposome are quite well known in the art.
Another embodiment of an SAAIFPRL1 inhibitory agent is a polypeptide that interferes with the assembly of the SAAIFPRL1 complex. Polypeptide fragments that inhibit the assembly of the SAAIFPRL1 complex can be rapidly engineered and identified given the present disclosure and candidate polypeptides can contain regions of FPRL1 or SAA. The screening of polypeptide fragments and mutant proteins that inhibit assembly of the SAA/FPRL1 complex would be routine given the present disclosure and assays described herein. For example, polypeptide inhibitory agents can be identified by their ability to disrupt assembly of the SAAIFPRL1 complex by employing conventional affinity chromatography techniques, sandwich assays, ELISA assays, or other binding assays known to those of skill in the art and described above.
In another embodiment, concentrations of FPRL1 or SAA are raised in a cell so as to enhance assembly of the SAAIFPRL1 complex. There can be many ways to raise the concentration of FPRL1 or SAA in a cell. Liposome-mediated transfer, is one approach to deliver FPRL1 or SAA to a cel. Alternatively, the concentration of FPRL1 or SAA can be raised in a cell by transfecting constructs encoding these molecules. A construct for use in the transfection of FPRL1 into cells in culture is described and many others can be developed by those of skill in the art. Retroviral constructs for the delivery of nucleic acid encoding FPRL1 or SAA or fragments thereof or complements thereof are also contemplated and many retroviral vectors can be engineered accordingly. Other embodiments of inhibitory or enhancing agents (collectively refered to as "modulators") include antibodies, peptidomimetics, and chemicals that inhibit or enhance assembly of the SAAIFPRL1 complex. Several other methods for identifying agents that modulate are discussed below.
In the discussion that follows, we describe several methods of molecular modeling and rational drug design for the identification of ligands that resemble SAA and interact with FPRL1 or vice versa to effect cellular responses including, but not limited to, signal transduction, chemotaxis, leukocyte migration, immune system response, amyloidosis, inflammatory response, infection, organ rejection, arthritis, atherosclerosis, and neoplasia.
Methods of Rational Drug Design Rational drug design involving polypeptides requires identifying and defining a first peptide with which the designed drug is to interact, and using the first target peptide to define the requirements for a second peptide. With such requirements defined, one can find or prepare an appropriate peptide or non-peptide WO 01/21188 PCT/US99/21770 ligand that meets all or substantially all of the defined requirements. Thus, one goal of rational drug design is to produce structural or functional analogs of biologically active polypeptides of interest or of small molecules with which they interact agonists, antagonists, null compounds) in order to fashion drugs that are, for example, more or less potent forms of the ligand. (See, Hodgson, Bio. Technology 9:19-21 (1991)). An example of rational drug design is the development of HIV protease inhibitors. (Erickson et al., Science 249:527-533 (1990)). Combinatorial chemistry is the science of synthesizing and testing compounds for bioactivity en masse, instead of one by one, the aim being to discover drugs and materials more quickly and inexpensively than was formerly possible. Rational drug design and combinatorial chemistry have become more intimately related in recent years due to the development of approaches in computer-aided protein modeling and drug discovery. See e.g, US Pat. No. 4,908,773; 5,884,230; 5,873,052; 5,331,573; and 5,888,738.
The use of molecular modeling as a combinatorial chemistry tool has dramatically increased due to the advent of computer graphics. Not only is it possible to view molecules on computer screens in three dimensions but it is also possible to examine the interactions of ligands with various macromolecules such as enzymes and receptors and rationally design derivative molecules to test. (See Boorman, Chem. Eng. News 70:18-26 (1992). A vast amount of user-friendly software and hardware is now available and virtually all pharmaceutical companies have computer modeling groups devoted to rational drug design. Molecular Simulations Inc., for example, (www.msi.com) sells several sophisticated programs that allow a user to start from an amino acid sequence, build a two or three-dimensional model of the protein or polypeptide, compare it to other two and three-dimensional models, and analyze the interactions of compounds, drugs, and peptides with a three dimensional model in real time.
Accordingly, in some embodiments of the invention, software is used to compare regions of SAA or FPRL1 and fragments thereof that are involved in the assembly of the SAAIFPRL1 complex with other molecules, such as peptides, peptidomimetics, and chemicals, so that therapeutic interactions of new molecules ligands for FPRL1) can be predicted and new derivative molecules can be designed. (Schneider, Genetic Engineerng News December: page 20 (1998), Tempczyk et al., Molecular Simulations Inc. Solutions April (1997) and Butenhof, Molecular Simulations Inc. Case Notes (August 1998)). Libraries of molecules that resemble SAA or FPRL1 or that effect assembly of the SAA/FPRL1 complex and, thereby inhibit or enhance the function of FPRL1 "modulate" FPRL1 induced cellular response) can be created. In some contexts, the term "FPRL1 modulating agent" or "modulators" includes SAA or FPRL1, polypeptide fragments corresponding to SAA or FPRL1, fusion proteins comprising SAA or FPRL1 or polypeptide fragments of these molecules, nucleic acids encoding these molecules, as well as, peptidomimetics, chemicals, and other molecules that modulate assembly of the SAAIFPRL1 complex.
As a starting point to rational drug design, a two or three dimensional model of a polypeptide of interest is created SAA, FPRL1, andlor fragments thereof). In the past, the three-dimensional structure of proteins has been determined in a number of ways. Perhaps the best known way of determining protein structure involves the use of x-ray crystallography. A general review of this technique can be found in Van Holde, K.E. Physical Biochemistry. Prentice-Hall, N.J. pp. 221-239 (1971). Using this technique, it is possible to elucidate three.
WO 01/21188 PCTIUS99/21770 dimensional structure with good precision. Additionally, protein structure can be determined through the use of techniques of neutron diffraction, or by nuclear magnetic resonance (NMR). (See, Moore, Physical Chemistry, 4th Edition, Prentice-Hall, N.J. (1972)).
Alternatively, the protein model embodiments of the present invention can be constructed using computer-based protein modeling techniques. By one approach, the protein folding problem is solved by finding target sequences that are most compatible with profiles representing the structural environments of the residues in known three-dimensional protein structures. (See, U.S. Patent No. 5,436,850). In another technique, the known three-dimensional structures of proteins in a given family are superimposed to define the structurally conserved regions in that family. This protein modeling technique also uses the known three.
dimensional structure of a homologous protein to approximate the structure of a polypeptide of interest (See U.S. Patent Nos. 5,557,535; 5,884,230; and 5,873,052). Conventional homology modeling techniques have been used routinely to build models of proteases and antibodies. (Sowdhamini et al., Protein Engineering 10:207, 215 (1997)). Comparative approaches can also be used to develop three-dimensional protein models when the protein of interest has poor sequence identity to template proteins. In some cases, proteins fold into similar three-dimensional structures despite having very weak sequence identities. For example, the threedimensional structures of a number of helical cytokines fold in similar three-dimensional topology in spite of weak sequence homology.
The recent development of threading methods and "fuzzy" approaches now enables the identification of likely folding patterns and functional protein domains in a number of situations where the structural relatedness between target and template(s) is not detectable at the sequence level. By one method, fold recognition is performed using Multiple Sequence Threading (MST) and structural equivalences are deduced from the threading output using the distance geometry program DRAGON that constructs a low resolution model. A full-atom representation is then constructed using a molecular modeling package such as OUANTA.
According to this 3-step approach, candidate templates are first identified by using the novel fold recognition algorithm MST, which is capable of performing simultaneous threading of multiple aligned sequences onto one or more 3-D structures. In a second step, the structural equivalences obtained from the MST output are converted into interresidue distance restraints and fed into the distance geometry program DRAGON, together with auxiliary information obtained from secondary structure predictions. The program combines the restraints in an unbiased manner and rapidly generates a large number of low resolution model confirmations. In a third step, these low resolution model confirmations are converted into full-atom models and subjected to energy minimization using the molecular modeling package OUANTA. (See Asz6di et al., Proteins:Structure, Function, and Genetics, Supplement 1:38-42(1997)).
In a preferred approach, the commercially available "Insight II 98" program (Molecular Simulations Inc-I.) and accompanying modules are used to create a two andlor three dimensional model of a polypeptide of interest SAA or FPRL1 or a fragment thereof) from an amino acid sequence. Insight II is a three-dimensional graphics program that can interface with several modules that perform numerous structural analysis and enable real-time WO 01/21188 PCT/US99/21770 rational drug design and combinatorial chemistry. Modules such as Builder, Biopolymer, Consensus, and Converter, for example, allow one to rapidly create a two dimensional or three dimensional model of a polypeptide, carbohydrate, nucleic acid, chemical or combinations of the foregoing from their sequence or structure. The modeling tools associated with Insight II support many different data file formats including Brookhaven and Cambridge databases; AMPAC/MOPAC and QCPE programs; Molecular Design Limited Molfile and SD files, Sybel Mol2 files, VRML, and Pict files.
Additionally, the techniques described above can be supplemented with techniques in molecular biology to design models of the protein of interest. For example, a peptide of interest FPRL1, SAA andlor fragments thereof) can be analyzed by an alanine scan (Wells, Methods in Enzymol. 202:390-411 (1991)) or other types of site-directed mutagenesis analysis. In alanine scan, each amino acid residue of the polypeptide of interest is sequentially replaced by alanine in a step-wise fashion only one alanine point mutation is incorporated per molecule starting at position #1 and proceeding through the entire molecule), and the effect of the mutation on the peptide's activity in a SAA/FPRL1 characterization assay is determined. Each of the amino acid residues of the peptide is analyzed in this manner and the regions important for assembly of the SAAIFPRL1 complex are identified. These functionally important regions can be recorded on a computer readable medium, stored in a database in a computer system, and a search program can be employed to generate a protein model of the functionally important regions.
Once a model of the polypeptide of interest SAA, FPRL1, or a fragment thereof) is created, it can be compared to other models so as to identify new agents ("candidate agents") that can effect assembly of the SAA/FPRL1 complex. By starting with the amino acid sequence or protein model, for example, ligands having two-dimensional andlor three-dimensional homology can be rapidly identified. In one approach, a percent sequence identity can be determined by standard methods that are commonly used to compare the similarity and position of the amino acid of two polypeptides. Using a computer program such as BLAST or FASTA, two polypeptides can be aligned for optimal matching of their respective amino acids (either along the full length of one or both sequences, or along a predetermined portion of one or both sequences). Such programs provide 'default opening penalty and a "default" gap penalty, and a scoring matrix such as PAM 250 (a standard scoring matrix; see Dayhoff et al., in: Atlas of Protein Sequence and Structure, VoL 5, Supp. 3 (1978)) can be used in conjunction with the computer program. The percent identity can then be calculated as: total number of identical matches X 100 [length of the longer sequence within the matched span number of gaps introduced into the longer sequence in order to align the two sequencesi Accordingly, the protein sequence corresponding to SAA or FPRL1 or fragments thereof can be compared to known sequences on a protein basis. Protein sequences corresponding to SAA and FPRL1 are compared, for example, to known amino acid sequences found in Swissprot release 35, PIR release 53 and WO 01/21188 PCT/US99/21770 Genpept release 108 public databases using BLASTP with the parameter W-8 and allowing a maximum of matches. In addition, the protein sequences encoding SAA are compared to publicly known amino acid sequences of Swissprot using BLASTX with the parameter E-0.001. The candidate ligands desirably have at least 50% homology and preferably have 60% or 70% or 80% or 90% or greater homology to SAA or FPRL1.
The candidate ligands can have the following degrees of homology to SAA or FPRL1, for example: 50%, 51%, 52%, 53%, 54%, 55%, 56%, 57%, 58%, 59%, 60%, 61%, 62%, 63%, 64%, 65%, 66%, 67%, 68%, 69%, 71%, 72%, 73%, 74%, 75%, 76%, 77%, 78%, 79%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, and 99%. The candidate ligands having greater than or equal to 50% homology are identified and are subsequently examined using the SAAIFPRL1 characterization assays described herein. Candidate ligands that can effect assembly of the SAAIFPRL1 complex andlor modulate SAAIFPRL1-mediated signal transduction are, thus, identified.
In another embodiment, computer modeling and the sequence-to-structure-to-function paradigm is exploited to identify more FPRL1 modulating agents that effect assembly of the SAA/FPRL1 complex andlor modulate SAAIFPRL1-mediated signal transduction. By this approach, first the structure of a modulator SAA, FPRLI, or a fragment thereof) having a known response in a SAAIFPRL1 characterization assay is determined from its sequence using a threading algorithm, which aligns the sequence to the best matching structure in a structural database. Next, the protein's active site the site important for a desired response in the characterization assay) is identified and a "fuzzy functional form" (FFF) a three-dimensional descriptor of the active site of a protein is created. (See Fetrow et al., J. Mol. Biol. 282:703-711 (1998) and Fetrow and Skolnick, J. Mol. Biol. 281: 949-968 (1998).
The FFFs are built by iteratively superimposing the protein geometries from a series of functionally related proteins with known structures. The FFFs are not overly specific, however, and the degree to which the descriptors can be relaxed is explored. In essence, conserved and functionally important residues for a desired response are identified and a set of geometric and conformational constraints for a specific function are defined in the form of a computer algorithm. The program then searches experimentally determined protein structures from a protein structural database for sets of residues that satisfy the specified constraints. In this manner, homologous three-dimensional structures can be compared and degrees percentages of threedimensional homology) can be ascertained. The abilty to search three-dimensional structure databases for structural similarity to a protein of interest can also be accomplished by employing the Insight II using modules such as Biopolymer, Binding Site Analysis, and Profies-3D.
By using this computational protocol, genome sequence data bases such as maintained by various organizations including: http:llwww.tiqr.orfgtdb; http:l/www.genetics.wisc.edu: http:l/Qenomewww.stanford.edu/ ball; http:/hiv-web.lanl.gov: http:/lwwwnchi.nlm.nih.qov: http://www.ebi.ac.uk; http:llpasteur.frlother/biology; and http://www-genome.wi.mit.edu, can be rapidly screened for specific protein active sites and for identification of the residues at those active sites that resemble a desired molecule.
Several other groups have developed databases of short sequence patterns or motifs designed to identify a WO 01/21188 PCT/US99/21770 given function or activity of a protein. Many of these databases, notably Prosite (htto://expasy.hcuqe.ch/sprot/rosite.html): Blocks (http:/www.blocks.fhcrc.orq); Prints (http:llwww.biochem.ucl.ac.uk/bsm/dbbrowser/PRINTSIPRINTS.html), the Molecular Modelling Database (MMDB), and the Protein Data Bank can use short stretches of sequence information to identify sequence patterns that are specific for a given function; thus they avoid the problems arising from the necessity of matching entire sequences. In this manner, new modulating agents are rationally selected for further identification by SAAIFPRL1 characterization assays, as described above. Rounds or cycles of functional assays on the molecules and derivatives thereof and further FFF refinement and database searching allows an investigator to more narrowly define classes of modulating agents that produce a desired effect on assembly of the SAA/FPRL1 complex andlor SAAIFPRL1 -mediated signal transduction.
In addition to identifying naturally occuring ligands for SAA andlor FPRL1 or fragments thereof, a three-dimensional structure of these peptides can facilitate the design of derivative molecules that produce a more desirable cellular response. Polypeptide derivatives of the invention can be fragments of SAA or FPRL1 or homologs or mutants of SAA or FPRL1, or polypeptide fusions, modified polypeptides, peptidomimetics, or chemicals. For example, a derivative polypeptide can include a polypeptide that has been engineered to have one or more cystine residues incorporated into the protein so as to promote the formation of a more stable derivative through disulfide bond formation. (See US Pat. No. 4,908,773). In the past, investigators have employed computers and computer graphics programs to aid in assessing the appropriateness of potential cystine linkage sites. (Perry, L. Wetzel, Science, 226:555-557 (1984); Pabo, C. et al., Biochemistry, 25:5987-5991 (1986); Bott, et al., European Patent Application Ser. No. 130,756; Perry, L Wetzel, Biochemistry, 25:733-739 (1986); Wetzel, R. European Patent Application Ser. No.
155,832). The introduction of a cystine residue in a polypeptide can be accomplished using conventional molecular biology.
Additional polypeptide derivatives include peptidomimetics that resemble a polypeptide of interest.
The naturally occurring amino acids employed in the biological production of peptides all have the Lconfiguration. Synthetic peptides can be prepared employing conventional synthetic methods, utilizing L-amino acids, D-amino acids, or various combinations of amino acids of the two different configurations. Synthetic compounds that mimic the conformation and desirable features of a particular peptide, an oligopeptide, once such peptide has been found, but that avoids the undesirable features, flexibility (loss of conformation) and bond breakdown are known as a "peptidomimetics". (See, Spatola, A. F. Chemistry and Biochemistry of Amino Acids. Peptides, and Proteins (Weistein, B, Vol. 7, pp. 267-357, Marcel Dekker, New York (1983), which describes the use of the methylenethio bioisostere [CH2 S] as an amide replacement in enkephalin analogues; and Sielke et al., In peptides: Structure and Function, Proceedings of the Eighth American Peptide Symposium, (Hruby and Rich, Eds.); pp. 579-582, Pierce Chemical Co., Rockford, III. (1983), which describes renin inhibitors having both the methyleneamino ICH2 NH] and hydroxyethylene [CHOHCH? bioisosteres at the Leu-Val amide bond in the 6-13 octapeptide derived from angiotensinogen).
WO 01/21188 PCT/US99/21770 In general, the designing and synthesizing of a peptidomimetic involves starting with the sequence of the peptide and the conformation data geometry data, such as bond lengths and angles) of a desired peptide the most probable simulated peptide), and using such data to determine the geometries that should be designed into the peptidomimetic. Numerous methods and techniques are known in the art for performing this step, any of which could be used. (See, Farmer, P. Drug Design, (Ariens, E. J. Vol.
pp. 119-143 (Academic Press, New York, London, Toronto, Sydney and San Francisco) (1980); Farmer, et al., in TIPS, 9182, pp. 362-365; Verber et al., in TINS, 9185, pp. 392.396; Kaltenbronn et al., in J. Med. Chem.
33: 838-845 (1990); and Spatola, A. in Chemistry and Biochemistry of Amino Acids. Peptides, and Proteins, Vol. 7, pp. 267-357, Chapter 5, "Peptide Backbone Modifications: A Structure-Activity Analysis of Peptides Containing Amide Bond Surrogates. Conformational Constraints, and Relations" Weisten, ed.; Marcel) Dekker: New York, pub.) (1983); Kemp, D. "Peptidomimetics and the Template Approach to Nucleation of .beta.-sheets and .alpha.-helices in Peptides," Tibech, Vol. 8, pp. 249-255 (1990). Additional teachings can be found in U.S. Patent Nos. 5,288,707; 5,552,534; 5,811,515; 5,817,626; 5,817,879; 5.821,231; and 5,874,529.
Once protein models of the functionally important regions of SAA andlor FPRL1 have been generated, a database comprising one or more libraries having peptides, chemicals, peptidomimetics and other agents can also be accessed by a search program and selected agents can be compared to the protein models to identify molecules that effect the assembly of the SAAIFPRL1 complex andlor modulate SAAlFPRL1-mediated signal transduction. Desirably, agents identified by the approach above are then tested in theSAAFPRL1 characterization assays and are used to construct multimeric agents andlor are incorporated into pharmaceuticals. One program that allows for such analysis is Insight II having the Ludi module. Further, the LudilACD module allows a user access to over 65.000 commecialy available drug candidates (MDL's Available Chemicals Directory) and provides the ability to screen these compounds for interactions with the protein of interest.
By a similar approach, a modulating agent that interacts with FPRL1 or SAA can be manufactured and identified as follows. First, a molecular model of one or more modulating agents or portions of these molecules that interact with FPRL1 or SAA are created using one of the techniques discussed above or as known in the art. Next, chemical libraries and databases are searched for molecules similar in structure to the known FPRL1 modulating agents. That is, a search can be made of a three dimensional data base for nonpeptide (organic) structures non-peptide analogs, andlor dipeptide analogs) having three dimensional similarity to the known structure of the target compound. See, the Cambridge Crystal Structure Data Base, Crystallographic Data Center, Lensfield Road, Cambridge, CB2 1EW, England; and Allen, F. et al., Acta Crystallogr., B35: 2331-2339 (1979).
It is noted that search algorithms for three dimensional data base comparisons are available in the literature. See, Cooper, et al., J. Comput.-Aided Mol. Design, 3: 253-259 (1989) and references cited therein; Brent, et al., J. Comput.-Aided Mol. Design, 2: 311-310 (1988) and references cited therein.
WO 01/21188 PCT/US99/21770 Commercial software for such searches is also available from vendors such as Day Light Information Systems, Inc., Irvine, Calif. 92714, and Molecular Design Limited, 2132 Faralton Drive, San Leandro,'Calif. 94577. The searching is done in a systematic fashion by simulating or synthesizing analogs having a substitute moiety at every residue level. Preferably, care is taken that replacement of portions of the backbone does not disturb the tertiary structure and that the side chain substitutions are compatible to retain the receptor substrate interactions.
Once candidate agents have been identified, desirably, they are analyzed in a SAAJFPRL1 characterization assay. The assays, described herein and assays that evaluate the formation of a SAAIFPRL1 complex in the presence of modulators, as will be apparent to one of skill in the art given the disclosure herein (referred to collectively as "FPRL1 characterization assays"), can be performed on the candidate agents and groups of modulating agents (wherein the grouping is based on the potency of modulation of the formation of a SAA/FPRL1 complex andlor SAAIFPRLl mediated signal transduction) are identified and recorded on a computer readable media. Further cycles of modeling and SAA/FPRL1 characterization assays can be employed to more narrowly define the parameters needed in an optimal FPRL1 modulating agent.
Each FPRL1 modulating agent and its response in a FPRL1 characterization assay can be recorded on a computer readable media and a database or library of FPRL1 modulating agents and respective responses in the SAAFPRLIcharacterization assay can be generated. These databases or libraries can be used by researchers to identify important differences between active and inactive molecules so that compound libraries are enriched for modulating agents that have favorable characteristics. Further, enrichment can be achieved by using approaches in dynamic combinatorial chemistry. (See Angnew, Chem. Int. Ed., 37:2828 (1998)).
For example, a target biomolecule, such as FPRL1 or SAA, is joined to a support and is bound by the modulating agents from the libraries generated above. The FPRL1 resin bound with one or more candidate modulating agents is removed from the binding reaction, the modulating agents are eluted from the support, and are identified. Cycles of immobilized target binding assays are conducted, classes of modulating agents that exhibit desired binding characteristics are identified, and this data is recorded on a computer readable media and is used to select more modulating agents that produce a desired modulation of the formation of a SAAJFPRL1 complex and or SAAIFPRLl-mediated signal transduction.
Additionally, agents identified by the approaches described above can be synthesized on solid support beads by split-and-pool synthesis, a multistage process for producing very large numbers of compounds, to facilitate testing. The support-bound agents can be screened in SAA/FPRL1 characterization assays or "free mixtures" are created by cleaving the agent from the support and these free mixtures are screened in the FPRL1 characterization assays. Compounds that produce desirable responses are identified, recorded on a computer readable media, and the process can be repeated to select optimal FPRL1 modulating agents.
Many computer programs and databases can be used with embodiments of the invention to identify agents that modulate assembly of the SAA/FPRL1 complex andlor SAA/FPRL1-mediated signal transduction. The following fist is intended not to limit the invention but to provide guidance to programs and databases that are WO 01/21188 PCT/US99/21770 useful with the approaches discussed above. The programs and databases that can be used include, but are not limited to: MacPattern (EMBL), DiscoveryBase (Molecular Applications Group), GeneMine (Molecular Applications Group), Look (Molecular Applications Group), MacLook (Molecular Applications Group), BLAST and BLAST2 (NCBI), BLASTN and BLASTX (Altschul et al, J. Mol. Bio. 215: 403 (1990), herein incorporated by reference), FASTA (Pearson and Lipman, Proc. Nat. Acad. Sci USA, 85: 2444 (1988), herein incorporated by reference), Catalyst (Molecular Simulations Inc.), Catalyst/SHAPE (Molecular Simulations Inc.), Cerius'.DBAccess (Molecular Simulations Inc.), HypoGen (Molecular Simulations Inc.), Insight II, (Molecular Simulations Inc.), Discover (Molecular Simulations Inc.), CHARMm (Molecular Simulations Inc.), Felix (Molecular Simulations Inc.), DelPhi, (Molecular Simulations Inc.), QuanteMM, (Molecular Simulations Inc.), Homology (Molecular Simulations Inc.), Modeler (Molecular Simulations Inc.), Modeller 4 (Sali and Blundell J. Mol. Biol. 234:217-241 (1997)). ISIS (Molecular Simulations Inc.), Quanta/Protein Design (Molecular Simulations Inc.), Weblab (Molecular Simulations Inc.), WebLab Diversity Explorer (Molecular Simulations Inc.), Gene Explorer (Molecular Simulations Inc.), SeqFold (Molecular Simulations Inc.), the EMBUSwissprotein database, the MDL Available Chemicals Directory database, the MDL Drug Data Report data base, the Comprehensive Medicinal Chemistry database, Derwents's World Drug Index database, and the BioByteMasterFile database. Many other programs and data bases would be apparent to one of skill in the art given the present disclosure.
In the discussion below, we describe several embodiments of the invention that have therapeutic and/ or prophylactic application.
Therapeutic and prophylactic applications In the therapeutic and prophylactic embodiments, the peptide agents identified as modulating the formation of the SAA/FPRL1 complex andlor SAA/FPRL1-mediated signal transduction are incorporated into a pharmaceutical product and are administered to a subject in need. The monomeric and multimeric peptide agents of the invention are suitable for treatment of subjects either as a preventive measure to avoid a particular cellular response or as a therapeutic to treat subjects in need of a particular cellular response.
One contemplated method of making a pharmaceutical involves the selection of a peptide agent that interacts with FPRL1, preferably SAA, a fragment of SAA, or a peptidomimetic that resembles SAA or a fragment thereof, and incorporating the peptide agent into a pharmaceutical by conventional techniques.
Additionally, a peptide agent such as FPRL1, a fragment of FPRL1, or a peptidomimetic that resembles FPRL1 or a fragment thereof can be incorporated into a pharmaceutical. The pharmaceuticals of the present invention can be formulated with an adjuvant or can be free and desirable embodiments provide the peptide agent in a support-bound form. Optionally, the peptide agent can be provided in an aggregated form as created, for example, by heating.
In another method of making a pharmaceutical, we envision incorporating a peptide agent selected for its ability to block, inhibit, or prevent a cellular response in the characterization assays described above. Accordingly, a peptide agent that interacts with FPRL1 or SAA and blocks, inhibits, or suspends a cellular response by effecting the assembly of the SAA/FPRL1 complex is identified and is incorporated into a pharmaceutical by conventional WO 01/21188 PCT/US99/21770 techniques. A novel class of peptide agents that bind FPRL1 or SAA with high.avidity but fail to induce a cellular response can be designed using approaches described above. These pharmaceuticals are formulated in adjuvant or free and are provided in the form of a support-bound agent, as wel. As above, an aggregated form of this embodiment can be created by heating the proteins and can administered to subjects in need.
The compounds of this invention can be employed in admixture with conventional excipients, i.e., pharmaceutically acceptable organic or inorganic carrier substances suitable for parenteral, enteral oral) or topical application which do not deleteriously react with the active compounds. Suitable pharmaceutically acceptable carriers include but are not limited to water, salt solutions, alcohols, gum arabic, vegetable oils, benzyl alcohols, polyetylene glycols, gelatine, carbohydrates such as lactose, amylose or starch, magnesium stearate, talc, silicic acid, viscous paraffin, perfume oil, fatty acid monoglycerides and diglycerides, pentaerythritol fatty acid esters, hydroxy methylcellulose, polyvinyl pyrrolidone, etc. The pharmaceutical preparations can be sterilized and if desired mixed with auxiliary agents, lubricants, preservatives, stabilizers, wetting agents, emulsifiers, salts for influencing osmotic pressure, buffers, coloring, flavoring andlor aromatic substances and the like which do not deleteriously react with the active compounds. They can also be combined where desired with other active agents, vitamins. The ligands can also be administered in the form of a support-bound agent or in a pro-drug form which interacts with a support so as to create a support-bound agent in the body of the subject. Further, the manufacture of pharmaceuticals or therapeutic agents that deliver the peptide agent andfor a nucleic acid sequence encoding the peptide agent by several routes is another aspect of the invention. For example, and not by way of limitation, the use of DNA, RNA, and viral vectors having sequence encoding the peptide agent is contemplated. Nucleic acids encoding a desired peptide agent can be administered alone or in combination with peptide agents.
In the following disclosure, doses and methods of administration are provided.
Dosage and methods of administration The effective dose and method of administration of a particular formulation of a peptide agent can vary based on the individual subject and the stage of the disease, as well as other factors known to those of skill in the art. Therapeutic efficacy and toxicity of such compounds can be determined by standard pharmaceutical procedures in cell cultures or experimental animals, ED50 (the dose therapeutically effective in 50% of the population) and LD50 (the dose lethal to 50% of the population). The dose ratio of toxic to therapeutic effects is the therapeutic index, and it can be expressed as the ratio, LD50/ED50.
Pharmaceutical compositions which exhibit large therapeutic indices are preferred. The data obtained from cell culture assays and animal studies is used in formulating a range of dosage for human use. The dosage of such compounds lies preferably within a range of circulating concentrations that include the ED50 with little or no toxicity. The dosage varies within this range depending upon the dosage form employed, sensitivity of the patient, and the route of administration.
WO 01/21188 PCT/US99/21770 The exact dosage is chosen by the individual physician in view of the patient to be treated. Dosage and administration are adjusted to provide sufficient levels of the active moiety or to maintain the desired effect. Additional factors which can be taken into account include the severity of the disease state, age, weight and gender of the patient; diet, time and frequency of administration, drug combination(s), reaction sensitivities, and tolerance/response to therapy. Long acting pharmaceutical compositions might be administered every 3 to 4 days, every week, or once every two weeks depending on half-life and clearance rate of the particular formulation.
Normal dosage amounts can vary from 0.1 to 100,000 micrograms, up to a total dose of about grams, depending upon the route of administration. Guidance as to particular dosages and methods of delivery is provided in the literature. (See U.S. Pat. Nos. 4,657,760; 5,206,344; or 5,225,212.) More specifically, the dosage of the peptide agents of the present invention is one that provides sufficient peptide agent to attain a desirable effect including an up-regulation or a down regulation of a cellular response. A constant infusion of the peptide agent can also be provided so as to maintain a stable concentration in the tissues as measured by blood levels.
Routes of administration of the peptide agents include, but are not limited to, topical, transdermal, parenteral, gastrointestinal, transbronchial, and transalveolar. Topical administration is accomplished via a topically applied cream, gel, rinse, etc. containing a peptide agent. Transdermal administration is accomplished by application of a cream, rinse, gel, etc. capable of allowing the peptide agent to penetrate the skin and enter the blood stream. Parenteral routes of administration include, but are not limited to, electrical or direct injection such as direct injection into a central venous line, intravenous, intramuscular, intraperitoneal or subcutaneous injection. Gastrointestinal routes of administration include, but are not limited to, ingestion and rectal. Transbronchial and transalveolar routes of administration include, but are not limited to, inhalation, either via the mouth or intranasally.
Compositions of peptide agent-containing compounds suitable for topical application include, but not limited to, physiologically acceptable implants, ointments, creams, rinses, and gels. Any liquid, gel, or solid, pharmaceutically acceptable base in which the peptide agents are at least minimally soluble is suitable for topical use in aspects of the present invention. For topical application, there are also employed as nonsprayable forms, viscous to semi-solid or solid forms comprising a carrier compatible with topical application and having a dynamic viscosity preferably greater than water. Suitable formulations include but are not limited to solutions, suspensions, emulsions, creams, ointments, powders, liniments, salves, aerosols, etc., which are, if desired, sterilized or mixed with auxiliary agents, preservatives, stabilizers, wetting agents, buffers or salts for influencing osmotic pressure, etc. For topical application, also suitable are sprayable aerosol Spreparations wherein the active ingredient, preferably in combination with a solid or liquid inert carrier material, is packaged in a squeeze bottle or in admixture with a pressurized volatile, normally gaseous propellant, a freon.
WO 01/21188 PCT/US99/21770 Compositions of the peptide agents suitable for transdermal administration include, but are not limited to, pharmaceutically acceptable suspensions, oils, creams, and ointments applied directly to the skin or incorporated into a protective carrier such as a transdermal device ('transdermal patch"). Examples of suitable creams, ointments, etc. can be found, for instance, in the Physician's Desk Reference. Examples of suitable transdermal devices are described, for instance, in U.S. Patent No. 4,818,540 issued April 4, 1989 to Chinen, et al.
Compositions of the peptide agents suitable for parenteral administration include, but are not limited to, pharmaceutically acceptable sterile isotonic solutions. Such solutions include, but are not limited to, saline and phosphate buffered saline for injection into a central venous line, intravenous, intramuscular, intraperitoneal, or subcutaneous injection of the peptides. Additional embodiments for parenteral application include injectable, sterile, oily solutions, suspensions, emulsions, or implants, including suppositories. Ampoules are convenient unit dosages.
Compositions of the peptide agents suitable for transbronchial and transalveolar administration include, but not limited to, various types of aerosols for inhalation. Devices suitable for transbronchial and transalveolar administration of the peptide agents are also embodiments. Such devices include, but are not limited to, atomizers and vaporizers. Many forms of currently available atomizers and vaporizers can be readily adapted to deliver peptide agents.
Compositions of the peptide agents suitable for gastrointestinal administration include, but not limited to, pharmaceutically acceptable powders, tablets, pills, dragees, capsules, drops, or liquids for ingestion and suppositories for rectal administration. A syrup, elixir, or the like can be used wherein a sweetened vehicle is employed.
Sustained, pro-drugs, or directed release compositions can be formulated, liposomes or those wherein the active compound is protected with differentially degradable coatings, by microencapsulation, multiple coatings, etc. It is also possible to freeze-dry the ligands and use the lyophilizates obtained, for example, for the preparation of products for injection.
Aspects of the invention also include a coating for medical equipment. Alternatively, the peptides can be impregnated into a polymeric medical device such as catheters, stents and prosthetics. Coatings suitable for use in medical devices can be provided by a powder containing the peptides or by polymeric coating into which the peptides are suspended. Suitable polymeric materials for coatings or devices are those which are physiologically acceptable and through which a therapeutically effective amount of the peptide agent can diffuse. Suitable polymers include, but are not limited to, polyurethane, polymethacrylate, polyamide, polyester, polyethylene, polypropylene, polystyrene, polytetrafluoroethylene, polyvinyl-chloride, cellulose acetate, silicone elastomers, collagen, silk, etc. Such coatings are described, for instance, in U.S. Patent No. 4,612,337, issued September 16, 1986 to Fox et al. which is incorporated herein by reference.
It will be appreciated that the actual preferred amounts of active compound in a specific case will vary according to the specific compound being utilized, the particular compositions formulated, the mode of WO 01/21188 PCT/US99/21770 application, and the particular situs and organism being treated. The materials and methods and the experiments presented above are detailed in Su et al., J. Exp. Med., 189 (2):395402 (1999). The example below discloses the materials and methods used to perform many of the experiments described above.
EXAMPLE 1 Reagents and cells.
Recombinant human (rh) SAA was purchased from Pepro Tech Inc. (Rocky Hill. NJ) with the sequence as follows:
MRSFFSFLGEAFDGAROMWRAYSDMREANYIGSDKYFHARGNYDAAKRGPGGVWAAEAISNARENIQRFFGRGAEDS
LAOQAANEWGRSGKDPNHFRPAGLPEKY. (SEQ. ID. No. This rhSAA corresponds to SAA-la, Ouone of the major SAA isoforms in the serum, except for the addition of a methionine at the NH2 terminus as well as the substitution of aspartic acid for asparagine at position 60, which appears in the SAA2 isoform (reviewed in ref. Steinkasserer et al., Biochem. 268:187-193 (1990)). rhSAA at concentrations used in the study was negative for endotoxin as assessed by Limulus amebocyte lysate assays (sensitivity: 0.06 lU/ml. BioWhittaker, Walkersville, MD). High density lipoprotein (HDL) was purchased from Sigma (St. Louis, MO). Human peripheral blood enriched in mononuclear cells or neutrophils was obtained from normal donors by leukapheresis (courtesy of Transfusion Medicine Department, Clinical Center, National Institutes of Health, Bethesda, MD). The blood was centrifuged through Ficoll-Hypaque (Sigma) and mononuclear cells (PBMC) collected at the interphase were washed with PBS and centrifuged through a 46% isoosmotic Percoll (Pharmacia, Uppsala, Sweden) gradient followed by eleutriation to yield monocytes (purity: Neutrophils were purified by 3% dextran/PBS sedimentation as described elsewhere (Badolato et al., J. Exp. Med., 180:203-209 (1994)) and were more than 98% pure. The cells were resuspended in RPMI 1640 medium containing 10% FCS (Hyclone, Logan, UT) for future use. The molecular cloning of the receptors for fMLP was described previously (Murphy et al., J. Biol. Chem., 267:7637-7643 (1992); Gao, J.L and P.M. Murphy, J. Biol. Chem., 268:25395-25401 (1993); Murphy, P.M. and D. McDermott, J. Biol. Chem., 266:12560-12567 (1991); and Ali et al., J. Biol.
Chem., 273:11012-11016 (1998)). The cDNAs encoding classical formyl peptide receptor FPR and its variant FPRL1 were stably transfected into human embryonic kidney epithelial cell line 293 that were cultured in DMEM in the presence of 800 pglml geneticin (G418, GibcoBRL, Grand Island, NY) to maintain selection. A rat basophil leukemia cell line stably transfected with FPR (ETFR cells was also used in the study (a kind gift from Ors. H. Ali and R. Snyderman, Duke University Medical Center, NC).
Chemotaxis.
The migration of human 293 cells expressing FPR (FPR/293) or FPRL1(FPRL11293) as well as ETFR cells was assessed by a 48-well microchemotaxis chamber technique (Falk et al., J. Immun.o Methods, 33:239-247 (1980); and Gong et al., J. Biol. Chem. 272:11682-11685 (1997)). A 25 .I aliquot of rhSAA or other reagents diluted in chemotaxis medium (RPMI1640, 1% BSA, 25 mM HEPES) was placed in the wells of WO 01/21188 PCT/US99/21770 the lower compartment, and 50 pil cell suspension (1 x 106 cell/ml in chemotaxis medium) were placed in the wells of the upper compartment of the chamber (Neuroprobe, Cabin John, MD). The two compartments were separated by a polycarbonate filter (10 pm pore size, Neuroprobe) coated with 50 pglml collagen type I (GIBCO, Gaithersburg, MD) for 1 h at 37 0 C. The chamber was incubated at 37 0 C for 5 h in humidified air with 5% C02. At the end of the incubation, the filter was removed, fixed and stained with Diff-Quik (Harlew, Gibbstown, NJ). The number of migrated cells in three high-powered fields (400 x) were counted by light microscopy after coding the samples. Results are expressed as the mean SD) value of the migration in triplicate samples and are representative of at least 5 experiments performed. For better illustration, chemotaxis indexes (CI) reflecting the fold increase of cell migration in response to stimulant over medium are used. Statistical significance of the difference between numbers of cells migrating in response to stimuli versus baseline (migration toward control medium was calculated with Student's T test and the CI O 2 are statistically significant.
Calcium mobilization.
Calcium mobilization was assayed by incubating 10 7 1ml of monocytes, neutrophils or receptor cONA transfectants in loading buffer containing 138 mM NaCI, 6 mM KCI, 1 mM CaCI2, 10 mM HEPES (pH mM Glucose, 0.1% BSA with 5 pM Fura-2 (Sigma) at 37 0 C for 30 min. The dye-loaded cells were washed and resuspended in fresh loading buffer. The cells were then transfered into quartz cuvettes (106 cells in 2 ml) which were placed in a luminescence spectrometer LS50 B (Perkin-Elmer Limited, Beaconsfield, England).
Stimulants at different concentrations were added in a volume of 20 pl to the cuvettes at indicated time points. The ratio of fluorescence at 340 and 380 nm wavelength was calculated using the FL WinLab program.
The assays were performed at least 5 times and results from representive experiments are shown.
iUgand binding assays.
rhSAA (20 pg) was radio-iodinated on tyrosine and lysine residues with the chloramine T method and the specific activity of the labeled SAA was 5.8 mCilmg (courtesy of J. Dobbs, SAIC Frederick, NCI-FCROC, Frederick, MD). A constant concentration of 16 nM 125 1-SAA was incubated for 20 min at 37 0 C with human monocytes or 293 cells transfected with chemoattractant receptor cDNAs (1.5-2 X 106lsample, in 200 pl RPM11640, 1% BSA, 0.05% NaN3) in the presence of increasing concentrations of unlabeled SAA. After incubation, the cells were washed once with ice-cold PBS then were layered onto a 10% sucrose/PBS cushion in Eppendorf tubes. The cells were centrifuged at 10,000g for 1 min and the tips of the tubes containing cell pellets were cut and measured for radioactivity in a y-counter. The binding data were analyzed and plotted with a computer-aided program LIGAND Munson, Division of Computer Research and Technology, NIH, Bethesda, MD). The level of specific binding was determined by subtraction of non-specific binding (cpm on cells in the presence of 1 pM unlabeled SAA) from the total binding (cpm on cells in the absence of unlabeled SAA). Experiments were performed at least 5 times which yielded similar results.
Although the invention has been described with reference to embodiments and examples, it should be understood that various modifications can be made without departing from the spirit of the invention.
Accordingly, the invention is limited only by the following claims.
The term "comprise" and variants of the term such as "comprises" or "comprising" are used herein to denote the inclusion of a stated integer or stated integers but not to exclude any other integer or any other integers, unless in the context or usage an exclusive interpretation of the term is required.
Any reference to publications cited in this specification is not an admission that the disclosures constitute common general knowledge in Australia.
S EDITORIAL NOTE: APPLICATION NUMBER: 63951/99 The following Sequence Listing pages 1 to 72 are part of the description followed by claims page 57.
WO 01/21188 WO 0121188PCTIUS99/21 770 SEQUENCE LISTING <110> Ji Ming Wang Joost J. Oppenheim Shao-Bo Su Wang-Hua Gong Ji-Liang Gao Philip M. Murphy <120> UTILIZATION OF FPRL1 AS A FUNCTIONAL RECEPTOR BY SERUM AMYLOID A (SAA) <130> N1H173.OO1VPC <160> 301 <170> FastSEQ for Windows Version <210> 1 <211> 105 <212> PRT <213> Homo Sapiens <400> 1 Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Met Trp Arg Ala Tyr Ser Asp Met Arg Glu. Ala 7 Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp 1 Pro Gly Gly Val Trp Ala Ala Glu Ala Ile Ser 1 55 Ile Gln Arg Phe Phe Gly Arg Gly Ala Glu Asp Ala Ala Asn Glu. Trp Gly Arg Ser Gly Lys Asp 1 Pro Ala Gly Leu Pro Glu Lys Tyr <210> 2 <211> 4 <212> PRT <213> Homo Sapiens <400> 2 Met Arg Ser Phe (210> 3 <211> <212> PRT <213> Homo Sapiens <400> 3 Arg Ser Phe Phe <210> 4 <211> 6 <212> PRT Met 1 WO 01/21188 <213> Homo Sapiens PCTIUS99/21 770 <400> Arg Ser <210> (211> <212> <213> <400> Arg Ser <210> <211> <212> <213> <400> Arg Ser <210> <211> <212> <2 13> <400> Arg Ser <210> <211> <212> <213> <400> Arg Ser <210> <211> <212> <213> <400> Arq Ser 4 Phe Phe Ser 7
PRT
Homo Sapiens Phe Phe Ser Phe 6 8
PRT
Homo Sapiens 6 Phe Phe Ser Phe Leu 9
PRT
Homo Sapiens 7 Phe Phe Ser Phe Leu Gly 8
PRT
Homo Sapiens 8 Phe Phe Ser Phe Leu Gly Glu 9 11
PRT
Homo Sapiens 9 Phe Phe Ser Phe Leu Gly Giu Ala <210> <211> 12 <212> PRT <213> Homo Sapiens <400> Met Arq Ser Phe Phe Ser Phe Leu C-ly Glu Ala Phe 1 5 <210> 11 <211> 13 WO 01/21188 <212> PRT <213> Homo Sapiens <400> 11 Met Arg Ser Phe Phe Ser Phe Len Gly Glu Ala Phe Asp PCT/US99/21770 <210> 12 <211> 14 <212> PRT <213> Homo Sapiens <400> 12 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly 1 5 <210> 13 <211> <212> PRT <213> Homo Sapiens <400> 13 Met Arg Ser Phe Phe Ser Phe Len Gly Gin Ala Phe Asp Gly Ala 1 5 10 <210> <211> <212> <213> 14 16
PRT
Homo Sapiens <400> 14 Met Arg Ser Phe Phe Ser Phe Lou Gly Gin Ala Phe Asp Gly Ala Arg 1 5 10 <210> <211> 16 <212> PRT <213> Homo Sapiens <400> Met Arg Ser Phe Phe Ser Phe Leu Gly Gin Ala Phe Asp Gly Ala Arg 1 5 10 <210> <211> <212> <213> 16 18
PRT
Homo Sapiens <400> 16 Met Arg Ser Phe Phe Ser Phe Len Gly Gin Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met <210> 17 <211> 19 <212> PRT <213> Homo Sapiens Met 1 <400> 17 Arg Ser Phe Phe Ser Phe Len Gly 5101 Glu Ala Phe Asp Gly Ala Arg 10 1b WO 01/21188 PCT/US99/21770 Asp Met Trp <210> 18 <211> <212> PRT <213> Homo Sapiens <400> 18 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg <210> 19 <211> 21 <212> PRT <213> Homo Sapiens <400> 19 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala <210> <211> 22 <212> PRT <213> Homo Sapiens <400> Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr <210> 21 <211> 23 <212> PRT <213> Homo Sapiens <400> 21 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arq 1 5 10 Asp Met Trp Arg Ala Tyr Ser <210> 22 <211> 24 <212> PRT <213> Homno Sapiens (400> 22 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp <210> 23 <211> <212> PRT <213> Homo Sapiens WO 01/21188 WO 0121188PCT/US99/2 1770 <400> Met Arg Ser 1 Asp Met Trp <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp 23 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met 24 26
PRT
Homo Sapiens 24 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arq 27
PRT
Homo Sapiens Phe Phe Ser Phe Leo Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arq Ala Tyr Ser Asp Met Arg Glu 26 28
PRT
Homo Sapiens 26 Phe Phe Ser Phe Leo Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala 27 29
PRT
H-omo Sapiens 27 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arq 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn 28 wRT Homo Sapiens 28 Phe Phe Ser Phc Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arq Glu Ala Asn Tyr 25 WO 01/21188 <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp <210> <211> (212> <213> (400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys <210> PCTIUS99/21 770 29 31
PRT
Homo Sapiens 29 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile 25 32
PRT
Homo Sapiens Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arq Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 31 33
PRT
Homo Sapiens 31 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 32 34
PRT
Homo Sapiens 32 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 33
FRT
Homno Sapiens 33 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 34 WO 01/21188 <211> (212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys 210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys <2 10> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys <210> <211> <212> <213> <400> Met Arq Ser 1 Asp Met Trp Ser Asp Lys <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys PCT/US99/21770 36
PRT
Homo Sapiens 34 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr 37
PRT
Homo Sapiens Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr Phe 36 38
PRT
Homo Sapiens 36 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr Phe His 37 39
PRT
Homo Sapiens 37 Phe Phe Ser Phe Leu Gly Gin Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr Phe His Ala 38
PRT
Homo Sapiens 38 Phe Phe Ser Phe Len Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Gin Ala Asn Tyr Ile Gly 25 Tyr Phe His Ala Arg WO 01121188 <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys <210> <211> <212> <213> <4 00> Met Arg Ser 1 Asp Met Trp Ser Asp Lys <210> <211> <212> <213> <400> Met Arg Ser
I
PCTIUS99/2 1770 39 41
PRT
Homo Sapiens 39 Phe Phe Ser Phe 5 Arg Ala Tyr Ser Tyr Phe His Ala 42
PRT
Homo Sapiens Phe Phe Ser Phe 5 Arg Ala Tyr Ser Tyr Phe His Ala 41 43
PRT
Homo Sapiens 41 Phe Phe Ser Phe 5 Arg Ala Tyr Ser Tyr Phe His Ala 42 44
PRT
H-omo Sapiens 42 Phe Phe Ser Phe 5 Arg Ala Tyr Ser Tyr Phe His Ala Leu Gly Glu Ala Phe Asp Gly Ala Arg 10 Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Arg Gly Leu Gly Glu Ala Phe Asp Gly Ala Arg 10 Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Arg Gly Asn Ala Phe Asp Gly Ala Arg Glu Ala Asn Tyr Ile Gly Tyr Ala Phe Asp Gly Ala Arg Glu Ala Asn Tyr Ile Gly Tyr Asp 43
PRT
Homo Sapiens 43 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 8 WO 01/21188 Asp Met Trp Ser Asp Lys <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys Gly PCT/US99/21770 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala 40 44 46
PRT
Homo Sapiens 44 Phe Phe Ser Phe 5 Arg Ala Tyr Ser Tyr Phe His Ala 47
PRT
Homo Sapiens Phe Phe Ser Phe 5 Arg Ala Tyr Ser Tyr Phe His Ala 46 48
PRT
Homo Sapiens 46 Phe Phe Ser Phe 5 Arg Ala Tyr Ser Tyr Phe His Ala 47 49
PRT
Homo Sapiens 47 Phe Phe Ser Phe 5 Arg Ala Tyr Ser Tyr Phe His Ala Leu Gly Glu Ala Phe 10 Asp Met Arg Glu Ala 25 Arg Gly Asn Tyr Asp 40 Leu Gly Glu Ala Phe 10 Asp Met Arg Glu Ala 25 Arg Gly Asn Tyr Asp 40 Leu Gly Glu Ala Phe 10 Asp Met Arg Glu Ala 25 Arg Gly Asn Tyr Asp 40 Leu Gly Glu Ala Phe 10 Asp Met Arg Glu Ala 25 Arg Gly Asn Tyr Asp 40 Asp Gly Ala Arg Asn Tyr Ile Gly Ala Ala Asp Gly Ala Arg Asn Tyr Ile Gly Ala Ala Lys Asp Gly Ala Arg Asn Tyr Ile Gly Ala Ala Lys Arg Asp Gly Ala Arg Asn Tyr Ile Gly Ala Ala Lys Arg <210> 48 <211> <212> PRT WO 01/21188 PCTfUS99/21770 <213> Homo Sapiens (400> 48 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ser Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Pro <210> 49 (211> 51 <212> PRT <213> Homo Sapiens <400> 49 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ser Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Pro Gly <210> <211> 52 <212> PRT <213> Homo Sapiens <400> Met Arg Ser Phe Phe Ser ?he Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ser Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Pro Gly Gly <210> 51 <211> 53 <212> PRT <213> Homno Sapiens <400> 51 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ser Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Pro Gly Gly Val <210> 52 <211> 54 <212> PRT <213> Homo Sapiens WO 01/21188 <400> 52 Met Arg Ser Phe 1 Asp Met Trp Arg Ser Asp Lys Tyr Gly Pro Gly Gly PCTIUS99/21 770 <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly 53
PRT
Homo Sapiens 53 Phe Phe Ser Arg Ala Tyr Tyr Phe His Gly Val Trp Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 10 Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 10 Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Al a 54 56
PRT
Homo Sapiens Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Val Trp Ala Ala 57
PRT
Homo Sapiens Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ilie Gly 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arq 40 Gly Val Trp Ala Ala Glu 56 58
PRT
Homo Sapiens 56 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 11 <210> <211> <212> <213> <400> Met Arg Ser WO 01/21188 1 Asp Met Trp Ser Asp Lys Gly Pro Gly <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly 5 Arg Ala Tyr Ser Tyr Phe His Ala Gly Val Trp Ala 57 59
PRT
Homno Sapiens 57 Phe Phe Ser Phe Arg Ala Tyr Ser Tyr Phe His Ala Gly Val Trp Ala 58
PRT
Homo Sapiens 58 Phe Phe Ser Phe Arg Ala Tyr Ser Tyr Phe His Ala Gly Val Trp Ala 55 59 61
PRT
Homo Sapiens 59 Phe Phe Ser Phe Arg Ala Tyr Ser Tyr Phe His Ala Gly Val Trp Ala 55 62
PRT
Homo Sapiens Phe Phe Ser Phe 5 Arg Ala Tyr Ser PCT/US99/2 1770 10 Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Ala Gin Ala Leu Gly Gin Ala Phe Asp Gly Ala Arg 10 Asp Met Arg Gin Ala Asn Tyr Ile Gly 25 Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Ala Glu Ala Ile Leu Gly Glu Ala 10 Asp Met Arg Glu 25 Arg Gly Asn Tyr 40 Ala Gin Ala Ile Len Gly Gin Ala 10 Asp Met Arg Gin 25 Arg Gly Asn Tyr 40 Ala Gin Ala Ile Phe Asp Gly Ala Arg Ala Asn Tyr Ile Gly Asp Ala Ala Lys Arg Ser Phe Asp Gly Ala. Arg Ala Asn Tyr Ile Gly Asp Ala Ala Lys Arg Ser Asn <210> <211> <212> <213> <400> Met Arg Ser
I
Asp Met Trp Len Gly Gin Ala Phe Asp Giy Ala Arg 10 Asp Met Arg Gin Ala Asn Tyr Ile Gly 12 WO 01/21188 Ser Asp Lys Gly Pro Gly PCT/US9921770 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arq 40 Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala 55 <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly <210> <2 11> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile 61 63
PRT
Homo Sapiens 61 Phe Phe Ser 1 Arg Ala Tyr Tyr Phe His 2 Gly Val Trp 2 62 64
PRT
Homo Sapiens 62 Phe Phe Ser 1 Arg Ala Tyr Tyr Phe His 2 Gly Val Trp J 63 66
PRT
Homo Sapiens 63 Phe Phe Ser 1 Arg Ala Tyr Tyr Phe His 2 Gly Val Trp 2 Leu Gly Glu Ala 10 Asp Met Arg Glu 25 Arg Gly Asn Tyr 40 Ala Glu Ala Ile Leu Gly Giu Ala 10 Asp Met Arg Glu 25 Arg Gly Asn Tyr 40 Ala Glu Ala Ile Leu Gly Glu Ala 10 Asp Met Arq Glu 25 Arq Gly Asn Tyr 40 Ala Glu Ala Ile Phe Asp Gly Ala Arg is Ala Asn Tyr Ile Gly Asp Ala Ala Lys Arg Ser Asn Ala Arg Phe Asp Gly Ala Arg Ala Asn Tyr Ile Gly Asp Ala Ala Lys Arg Ser Asn Ala Arg Glu Phe Asp Gly Ala Arq Ala Asn Tyr Ile Gly Asp Ala Ala Lys Arg Ser Asn Ala Arg Glu <210> <211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp 64 67
PRT
Homo Sapiens 64 The Phe Ser Phe Leu Gly Giu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ilie Gly 13 WO 01/21188 Ser Gly Asn Met 1 Asp Ser Gly Asn Met 1 Asp Ser Gly Asn Met 1 Asp Ser Gly Asn Asp Lys Pro Gly Ile Gin <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin PCT/US99/21770 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 68
PRT
Homo Sapiens Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 Arg 66 69
PRT
Homo Sapiens 66 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 Arg Phe 67
PRT
Homo Sapiens 67 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Val Trp Ala Ala Glu Ala lie Ser Asn Ala Arg Glu 55 Arg Phe Phe <210> 68 <211> 71 <212> PRT WO 01/21188 PCT/US99/21770 Met 1 Asp Ser Gly Asn Met 1 Asp Ser Gly Asn Met 1 Asp Ser Gly Asn Met 1 Asp Ser Gly <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Homo Sapiens 68 Phe Phe Ser 5 Arg Ala Tyr Tyr Phe His Gly Val Trp Arg Phe Phe 69 72
PRT
Homo Sapiens 69 Phe Phe Ser 5 Arg Ala Tyr Tyr Phe His Gly Val Trp Arg Phe Phe 73
PRT
Homo Sapiens Phe Phe Ser 5 Arg Ala Tyr Tyr Phe His Gly Val Trp Arg Phe Phe Phe Leu Gly Glu Ala Phe Asp Gly 10 Ser Asp Met Arg Glu Ala Asn Tyr 25 Ala Arg Gly Asn Tyr Asp Ala Ala 40 Ala Ala Glu Ala Ile Ser Asn Ala 55 Gly Ala Arg Ile Gly Lys Arg Arg Glu Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 10 Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 Gly Arg Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 10 Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 Gly Arg Gly 71 74
PRT
Homo Sapiens 71 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 WO 01/21188 Asn Ile Gin PCT/US9921770 Arg Phe Phe Gly Arg Gly Ala Met Asp Ser Gly Asn Met Asp Ser Giy Asn <210> <211> <212> (213> <400> Arg Ser Met Trp Asp Lys Pro Giy Ile Gin <210> <211> <212> <213> (400> Arg Ser Met Trp Asp Lys Pro Giy Ile Gin (210> 21i1> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin 72
PRT
Homo Sapiens 72 Phe Phe Ser Arg Ala Tyr Tyr Phe His2 Gly Val Trp2 Arg Phe Phe 70 73 76
PRT
Homo Sapiens 73 Phe Phe Ser Arg Ala Tyr Tyr Phe His2 Gly Val Trp2 Arg Phe Phe 70 74 77
PRT
Homno Sapiens ?he Leu Gly Giu 10 3er Asp Met Arg 25 ia Arg Gly Asn 4.0 Ia Ala Glu Ala 55 31y Arg Gly Ala ?he Leu Gly Giu 10 Ser Asp Met Arg 25 Ila Arg Gly Asn 40 ia Ala Giu Ala 55 31y Arg Gly Ala Ala Phe Asp Giy Ala Arq Glu Ala Asn Tyr Ile Gly Tyr Asp Ala Ala Lys Arg Ile Ser Asn Ala Arg Giu Glu Ala Phe Asp Gly Ala Arq Giu Ala Asn Tyr Ile Gly Tyr Asp Ala Ala Lys Arg Ile Ser Asn Ala Arg Glu Giu Asp Phe Leu Gly Glu Ser Asp Met Arg Ala Arg Gly Asn 40 Ala Ala Glu Ala 55 Gly Arg Gly Ala Ala Phe Asp Gly Ala Arg Giu Ala Asn Tyr Ile Gly Tyr Asp Ala Ala Lys Arg Ile Ser Asn Ala Arg Giu Glu Asp Ser <210> <211>Z <212> <213> <400> Met Arg Ser 1 78
PRT
Homo Sapiens Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 WO 01/21188 Asp Met Trp Ser Asp Lys Gly Pro Gly Asn Ile Gin Ser Asp Met Arg Ala Arg Gly Asn 40 Ala Ala Glu Ala 55 Gly Arg Gly Ala PCTIUS99/21 770 Giu Ala Asn Tyr Ile Gly Tyr Asp Ala Ala Lys Arg Ile Ser Asn Ala Arg Giu Giu Asp Ser Leu <210> 76 <211> 79 <212> PR <213> Hoi <400> 76 Arg Ser Ph, Met Trp Ar, Asp Lys Ty.
Pro Gly Gl Ile Gin Ar, <210> 77 <211> <2i2> PR <213> Hoi <400> 77 Arg Ser Ph Met Trp Ar, Asp Lys Ty Pro Gly G1 Ile Gin Ar,
T
no Sapiens Phe Leu Gly Glu Ser Asp Met Arg 25 Ala Arg Giy Asn 40 Ala Ala Glu Ala 55 Gly Arq Gly Ala Ala Phe Asp Gly Ala Arg Giu Ala Asn Tyr Ile Gly Tyr Asp Ala Ala Lys Arg Ile Ser Asn Ala Arg Glu Glu Asp Ser Leu Ala
T
mo Sapiens Phe Leu Gly Giu Ser Asp Met Arg 25 Ala Arg Gly Asn 40 Ala Ala Glu Ala 55 Gly Arg Gly Ala Ala Phe Asp Giy Ala Giu Ala Asn Tyr Ile Tyr Asp Ala Ala Lys Ile Ser Asn Ala Arg Glu Asp Ser Leu Ala <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin 78 81
PRT
Homo Sapiens 78 Phe Phe Ser Phe Leu Gly Glu 10 Arg Ala Tyr Ser Asp Met Arg 25 Tyr Phe H-is Ala Arg Gly Asn 40 Gly Val Trp Ala Ala Glu Ala 55 Arg Phe Phe Gly Arg Gly Ala Ala Phe Asp Gly Ala Glu Ala Asn Tyr Ile Tyr Asp Ala Ala Lys Ile Ser Asn Ala Arg Glu Asp Ser Leu Ala WO 01/21188 <210> <211> <212> <213> <400> Met Arg Ser
I
Asp Met Tip Ser Asp Lys Gly Pro Gly Asn Ile Gin Gin Ala PCTIUS99I2 1770 79 82
PRT
Homno Sapiens 79 Phe Phe Ser Phe Leu Gly Giu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Aia Asn Tyr Ile Gly 25 Tyr Phe His Aia Arg Giy Asn Tyr Asp Ala Ala Lys Arg 40 Gly Val Trp Ala Ala Giu Ala Ile Ser Asn Ala Arg Glu 55 Arg Phe Phe Giy Arg Giy Ala Giu Asp Ser Leu Ala Asp 70 75 83
PRT
Homo Sapiens Phe Phe Ser Phe Leu Giy Giu Ala Phe Asp Giy Aia Arg 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Val Trp Ala Aia Giu Ala Ile Ser Asn Ala Arg Glu 55 Arg Phe Phe Gly Arg Gly Ala Giu Asp Ser Leu Ala Asp 75 <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Giy Ile Gin Ala Ala <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin Ala Ala <210> <211> <212> <213> 81 84
PRT
Homo Sapiens Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly Aia Arg Giy Asn Tyr Asp Ala Ala Lys Arg 40 Ala Ala Giu Ala Ile Ser Asn Ala Arg Giu 55 Giy Arg Gly Ala Giu Asp Ser Leu Ala Asp 82
PRT
Homo Sapiens WO 01/21188 <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys Gly Pro Gly Asn Ile Gin Gin Ala Ala PCT/US99/2 1770 Ser Phe Leu Gly Glu Ala Phe Asp Gly Tyr Ser Asp Met Arg Giu Ala Asn Tyr His Ala Arg Gly Asn Tyr Asp Ala Ala 40 Trp Ala Ala Glu Ala Ile Ser Asn Ala 55 Phe Gly Arg Gly Ala Giu Asp Ser Leu 70 Met Asp Ser Gly As n Gin <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin Ala Ala <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gln Ala Ala 83 86
PRT
Homo Sapiens 83 Phe Phe Ser Arg Ala Tyr Tyr Phe H-is Gly Val Trp Arg Phe Phe 70 Asn Glu Trp 84 87
PRT
Homo Sapiens Phe Leu Gly Glu 10 Ser Asp Met Arg 25 Alia Arg Gly Asn 40 A\la Ala Glu Ala 55 Gly Arg Gly Ala Ala Phe Asp Gly Ala Arg Glu Ala Asn Tyr Ile Gly Tyr Asp Ala Ala Lys Arg Ile Ser Asn Ala Arg Glu Glu Asp Ser Leu Ala Asp 75 Met Asp Se r Gi y Asn Gln Leu Gly Glu Asp Met Arg Arg Gly Asn 40 Ala Glu Ala Arg Gly Ala Ala Phe Asp Gly Ala Glu Ala Asn Tyr Ile Tyr Asp Ala Ala Lys Ile Ser Asn Ala Arg Glu Asp Ser Leu Ala <210> <211> <212> <213> <400> Met Arq Ser 1 Asp Met Trp 88
PRT
Homo Sapiens Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 WO 01/21188 Ser Asp Gly Pro Asn Ile Gin Ala PCT/US9912 1770 Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Ala Ala Gin Ala Ile Ser Asn Ala Arg Gin 55 Gly Arg Gly Ala Giu Asp Ser Leu Ala Asp 75 Gly Arg <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin Ala Ala <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin Ala Ala 86 89
PRT
Homo Sapiens Ala Phe Asp Gly Ala Gin Ala Asn Tyr Ilie Tyr Asp Ala Ala Lys Ile Ser Asn Aia Arg Gin Asp Ser Len Ala 87
PRT
Homo Sapiens 87 ?he Phe Ser Arg Ala*Tyr Tyr Phe His Gly Val Trp Arg Phe Phe Asn Giu Trp Ala Phe Asp Gly Ala Glu Ala Asn Tyr Ile Tyr Asp Ala Ala Lys Ilie Ser Asn Ala Arg Gin Asp Ser Leu Ala <210> (211> <212> <213> <400> Met Arg Ser 1 Asp Met Trp Ser Asp Lys Gly Pro Gly Asn Ile Gin 88 91
PRT
Homo Sapiens 88 Phe Phe Ser Phe Leu Gly Gin Ala Phe Asp Gly Ala Arg 5 10 Arg Ala Tyr Ser Asp Met Arg Giu Ala Asn Tyr Ile Gly 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Val Trp Ala Ala Gin Ala Ile Ser Asn Ala Arg Glu 55 Arg Phe Phe Gly Arg Gly Ala Glu Asp Ser Len Ala Asp WO 01/21188 70 75 Gin Ala Ala Asn Giu Trp Gly Arq Ser Gly Lys PCT[US99/21770 Met 1 Asp Ser Gly As n Gin Met 1 Asp Ser Gly Asn Gln <210> <211> <212> <213> <400> Arq Ser Met Trp Asp Lys Pro Gly Ile Gin Ala Ala <210> <211> <212> <213> <400> Arg Ser Met Tro Asp Lys Pro Gly Ile Gin Ala Ala 89 92
PRT
Homo Sapiens 89 Phe Phe Ser 5 Arg Ala Tyr Tyr Phe His Gly Val Trp Arg Phe Phe 70 Asn Giu Trp 93
PRT
Homo Sapiens Phe Phe Ser 1 5 Arg Ala Tyr Tyr Phe His Gly Val Trp Arg Phe Phe 70 Asn Giu Trp Phe Asp Gly Ala Arg Ala Asn Tyr Ile Gly Asp Ala Ala Lys Arg Ser Asn Ala Arg Giu Asp Ser Leu Ala Asp Asp Gly Ala Arg Tyr Ile Gly Ala Lys Arq Ala Arg Giu Leu Ala Asp Met Asp Ser Gly Asn Gin <210> 91 <211> 94 <212> PRT <213> Homo Sapiens <400> 91 Arg Ser Phe Phe Ser 1 Met Trp Arg Ala Tyr Asp Lys Tyr Phe His Pro Gly Gly Val TrpJ Ile Gin Arq Phe Phe 70 Ala Ala Asn Giu Trp Ala Arg Ile Gly Lys Arg Arg Giu Ala Asp <210> 92 WO 01/21188 PCT/US99/21770 <211> <212> PRT <213> Homo Sapiens <400> 92 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ser Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Pro Gly Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 Asn Ile Gin Arg Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp 70 75 Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His 90 <210> 93 <211> 96 <212> PRT <213> Homo Sapiens <400> 93 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ser Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Pro Gly Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 Asn Ile Gin Arg Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp 70 75 Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe 90 <210> 94 <211> 97 <212> PRT <213> Homo Sapiens <400> 94 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ser Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Pro Gly Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 Asn Ile Gin Arg Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp 70 75 Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe 90 Arg <210> <211> 98 <212> PRT <213> Homo Sapiens WO 01/21188PCJS9217 PCTIUS99/21770 Met Asp Ser Gly Asn Gin Arg Met Asp Ser Gly As n Gin Arg <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin Ala Ala Pro <210> <211> <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Giy Ile Gin Ala Ala Pro Ala <210> <211> (212> <2 13> (400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin Ala Ala Pro Ala 96 99
PRT
Homo Sapiens 96 Phe Phe Ser Arg Ala Tyr Tyr Phe His.
Gly Val Trp Arq Phe Phe Asn Glu Trp 97 100
PRT
Homo Sapiens 97 Phe Phe Ser Arg Ala Tyr Tyr The His Gly Val Trp Arg Phe Phe 70 Asn Glu Trp Gly 100 98 101
PRT
Met Asp Ser Gly As n Gin Arg Phe Asp Gly Ala Asn Tyr Asp Ala Ala Ser Asn Ala Asp Ser Leu Asp Pro Asn Ala Arg Ile Gly Lys A-rg Arg Glu Ala Asp B0 His Phe <210> <211> <212> WO 01/21188 PCT/US99/21770 <213> Homo Sapiens <400> 98 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ser Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Pro Gly Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 Asn Ile Gin Arg Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp 70 75 Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe 90 Arg Pro Ala Gly Leu 100 <210> 99 <211> 102 <212> PRT <213> Homo Sapiens <400> 99 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ser Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Pro Gly Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 Asn Ile Gin Arg Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp 70 75 Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe 90 Arg Pro Ala Gly Leu Pro 100 <210> 100 <211> 103 <212> PRT <213> Homo Sapiens <400> 100 Met Arg Ser Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg 1 5 10 Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly 25 Ser Asp Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 40 Gly Pro Gly Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 55 Asn Ile Gin Arg Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp 70 75 Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe 90 Arg Pro Ala Gly Leu Pro Glu 100 <210> 101 <211> 104 WO 01/21188 WO 0121188PCT/US99/2 1770 Met Asp Se r Gly As n Gin Arg Arg Met Asp Pro Ile Ala Pro Se r Trp Lys Gly Gin Al a Ala <212> <213> <400> Arg Ser Met Trp Asp Lys Pro Gly Ile Gin Ala Ala Pro Ala <210> <211> <212> <213> <400> Ser Phe Trp Arg Lys Tyr Gly Gly Gin Arg Ala Asn Ala Gly
PRT
Homo Sapiens 101 Phe Phe Ser Arg Ala Tyr Tyr Phe His Giy Val Trp Arg Phe Phe Asn Glu Trp Gly Leu Pro 100 102 104
PRT
Homo Sapiens 102 Phe Ser Phe Ala Tyr Ser Phe His Ala Val Trp Ala Phe Phe Gly 70 Giu Trp Gly Leu Pro Giu 100 Phe Asp Giy Ala Asn Tyr Asp Ala Aia Ser Asn Ala Asp Ser Leu Asp Pro Asn <210> 103 <211> 103 <212> PRT <213> Homo Sapiens <400> 103 Phe*Phe Ser Phe Leu1 Arg Ala Tyr Ser Asp 1 Tyr Phe His Ala Arg Gly Val Trp Ala Ala Arg Phe Phe Gly Arg Asn Giu Trp Gly Arg Gly Leu Pro Glu Lys 100 (210> 104 WO 01/21188 PCT/US99/21770 <211> 102 <212> PRT <213> Homo Sapiens <400> 104 Phe Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg Asp Met Trp 1 5 10 Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr lle Gly Ser Asp Lys 25 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly 40 Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin 55 Arg Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala 70 75 Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala 90 Gly Leu Pro Glu Lys Tyr 100 <210> 105 <211> 101 <212> PRT <213> Homo Sapiens <400> 105 Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg Asp Met Trp Arg 1 5 10 Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr 25 Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly 40 Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg 55 Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn 70 75 Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly 90 Leu Pro Glu Lys Tyr 100 <210> 106 <211> 100 <212> PRT <213> Homo Sapiens <400> 106 Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg Asp Met Trp Arg Ala 1 5 10 Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe 25 His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val 40 Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe 55 Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu 70 75 Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu 90 Pro Glu Lys Tyr 100 WO 01/21188 WO 01/1 188PCTIUS99/21 770 Phe 1 Ser Ala Ala Gly Gly Glu <210> 107 (211> 99 <212> PRT <213> Homo Sapiens (400> 107 Leu Gly Glu Ala Phe Asp Met Arg Glu Ala Arg Gly Asn Tyr Asp Ala Glu Ala Ile Ser Arg Gly Ala Glu Asp Arg Ser Gly Lys Asp Lys Tyr Leu 1 Asp Arg Ala Arg Arg Lys Gly Met Gi y Gi u GI y Ser Tyr <210> <211> <212> <213> <400> Gly Glu Met Arg Gly Asn Glu Ala Gly Ala Ser Gly Tyr 108 98
PRT
H-omo Sapiens 108 Ala Phe Asp Glu Ala Asn Tyr Asp AlaI Ile Ser Asn I Glu Asp Ser 1 Lys Asp Pro 1 <210> 109 <211> 97 <212> PRT <213> Homo Sapiens <400> 109 Glu Ala Phe Asp Gly 1 Arg Glu Ala Asn Tyr Asn Tyr Asp Ala Ala I Ala Ile Ser Asn Ala 1Z Ala Glu Asp Ser Leu .Z Gly Lys Asp Pro Asn WO 01/21188 PCT/US99/2 1770 <210> 110 <211> 96 <212) PRT <213> Homno Sapiens <400> 110 Glu Ala Phe Asp Gly Ala Arg Asp Met Trp Arg Ala Tyr Ser Asp Met 1 5 10 Arg Giu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His Ala Arg Gly 25 Asn Tyr Asp Ala Ala Lys Arg Giy Pro Gly Gly Val Trp Ala Ala Glu 40 Ala Ile Ser Asn Ala Arg Giu Asn Ile Gin Arq Phe Phe Gly Arg Gly 55 Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arq Ser 70 75 Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 90 <210> 111 <211> <212> PRT <213> H-omno Sapiens <400> 111 Ala Phe Asp Gly Ala Arg Asp Met Trp Arg Ala Tyr Ser Asp Met Arg 1 5 10 Giu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His Ala Arg Gly Asn 25 Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala Ala Glu Ala 40 Ile Ser Asn Ala Arq Glu Asn Ile Gin Arg Phe Phe Gly Arg Gly Ala 55 Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg Ser Giy 70 75 Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Giu Lys Tyr 90 <210> 112 <211> 94 <212> PRT <213> Homo Sapiens <400> 112 Phe Asp Gly Ala Arg Asp Met Trp Arg Ala Tyr Ser Asp Met Arg Glu 1 5 10 Ala Asn Tyr Ile Gly Scr Asp Lys Tyr Phe His Ala Arg Giy Asn Tyr 25 Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala Ala Glu Ala Ile 40 Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly Arg Gly Ala Glu 55 Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys 70 75 Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lays Tyr <210> 113 <211> 93 <212> PRT <213> Homo Sapiens WO 01/21188 PCT/US99/21770 Asp 1 Asn Ala Asn Ser Pro Gly 1 Tyr Ala Ala Leu Asn Ala 1 Ile Lys Arg Ala His Arg 1 Gly <400> Gly Ala Tyr Ile Ala Lys Ala Arg Leu Ala Asn His <210> <211> <212> <213> <400> Ala Arg Ile Gly Lys Arg Arg Glu Ala Asp His Phe <210> <211> <212> <213> <400> Arg Asp Gly Ser Arg Gly Glu Asn Asp Gln Phe Arg <210> <211> <212> <213> <400> Asp Met Ser Asp 114 92
PRT
Homo Sapiens 114 Asp Met Trp J 5 Ser Asp Lys Gly Pro Gly Asn Ile Gin J Gin Ala Ala J 70 Arg Pro Ala 115 91
PRT
Homo Sapiens 115 Met Trp Arg 1 5 Asp Lys Tyr 1 Pro Gly Gly I lie Gin Arg I Ala Ala Asn 70 Pro Ala Gly 1 Arg Tyr Gly Arg Asn Gly Ala Phe Val 40 Phe Glu Leu Tyr His Trp 40 Phe Trp Pro Asp Met Arg Glu Ala Asn Arg Gly Asn Tyr Asp Ala Ala Glu Ala Ile Ser Asn Arg Gly Ala Glu Asp Ser Arg Ser Gly Lys Asp Pro 75 Lys Tyr Met Arg Glu Ala Asn Tyr Gly Asn Tyr Asp Ala Ala Glu Ala Ile Ser Asn Ala Gly Ala Glu Asp Ser Leu Ser Gly Lys Asp Pro Asn 75 Tyr 116
PRT
Homo Sapiens 116 Trp Arg Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile 5 10 Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys 29 WO 01/21188 Gly Pro Asn Ile Gin Ala Arg Pro <210> <211> <212> <213> <400> Met Trp Asp Lys Pro Gly Ile Gin Ala Ala Pro Ala <210> <211> <212> <213> <400> Trp Arg Lys Tyr Gly Gly Gin Arg Ala Asn Ala Giy <210> <211> <212> <213> <400> Arg Ala Tyr Phe Gly Val Arg Phe Trp Ala Ala 40 Phe Gly Arg 55 Trp Giy Arg Pro Giu Lys PCTJUS99/2 1770 Glu Ala Ile Ser Asn Ala Arg Gly Ala Glu Asp Ser Leu Ala Ser Giy Lys Asp Pro Asn His Tyr 117 89
PRT
Homo Sapiens 117 Arg Ala Tyr Tyr Phe His Gly Val Trp Arg Phe Phe Asn Glu Trp Gly Leu Pro 11B 88
PRT
Homo Sapiens 118 Ala Tyr Ser Phe His Ala Val Trp, Ala Phe Phe Gly Glu Trp Gly Leu Pro Giu 119 87
PRT
Homo Sapiens 119 Tyr Ser Asp His Ala Arg Trp Ala Ala Phe Gly Arg Arg Glu Ala Asn Tyr Ile Gly 10 Asn Tyr Asp Ala Ala Lys Arg Ala Ile Ser Asn Ala Arg Glu Ala Giu Asp Ser Leu Ala Asp Gly Lys Asp Pro Asn His Phe 75 830 Arg Glu Ala Asn Tyr Ile Gly Ser 10 Asn Tyr Asp Ala Ala Lys Arg Gly 25 Ala Ile Ser Asn Ala Arg Glu Asn Ala Glu Asp Ser Leu Ala Asp Gin Gly Lys Asp Pro Asn His Phe Arg 75 Met Arg Giu Ala Asn Tyr Ile Gly Ser Asp 10 Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro 25 Glu Ala Ile Ser Asn Ala Arg Glu Asn le 40 fly Ala Giu Asp Ser Leu Ala Asp Gin Ala 55 WO 01/21188 Ala Asn Glu Ala Gly Leu Arg 1 Tyr Gly Arg Asn Gly Tyr 1 His Trp Phe Trp Pro <210> <211> <212> <213> <400> Ala Tyr Phe His Val Trp Phe Phe Glu Trp Leu Pro <210> <211> <212> <213> <400> Ser Asp Ala Arg Ala Ala Gly Arg Gly Arg Glu Lys <210> <211> <212> <213> <400> Asp Met Arg Gly Ala Glu Arg Gly Arg Ser Lys Tyr PCT/US99/21770 Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro 70 75 Pro Glu Lys Tyr 120 86
PRT
Homo Sapiens 120 Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys 5 10 Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly 25 Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin 40 Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala 55 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala 70 75 Glu Lys Tyr 121 84
PRT
Homo Sapiens 121 Met Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe 5 10 Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val 25 Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe 40 Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu 55 Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu 70 75 Tyr 122 83
PRT
Homo Sapiens 122 Arg Glu Ala Asn Tyr Asp Ala Ile Ser Ala Glu Asp Gly Lys Asp Asn Tyr lle Ala Ala Lys 25 Asn Ala Arg 40 Ser Leu Ala 55 Pro Asn His Gly Ser Asp Lys Tyr Phe His 10 Arg Gly Pro Gly Gly Val Trp Glu Asn Ile Gln Arg Phe Phe Asp Gin Ala Ala Asn Glu Trp Phe Arg Pro Ala Gly Leu Pro 75 WO 01/21188 Asp Arg Ala Arg Arg Lys Met Gly Glu GI y Se r Tyr Arg As n Ala Al a Gly <210> <211> <212> <213> <400> Met Arg Gly Asn Glu Ala Gly Ala Ser Gly Tyr <210> ':211> <212> <213> <400> Arg Giu Asn Tyr Ala Ile Ala Glu Gly Lys <210> ':211> <212> <213> <400> Glu Ala Tyr Asp Ile Ser Glu Asp Lys Asp PCTIUS99/2 1770 123 82
PRT
Homo Sapiens 123 Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His Ala 10 Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala 25 Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly 40 Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Giu Trp Gly 55 Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu.Pro Glu 70 75 124 81
PRT
Homo Sapiens 124 Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His Ala Arg 10 Asp Ala Ala Lys Axg Gly Pro Gly Gly Val Trp Ala Ala 25 Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly Arg 40 Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg 55 Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys 70 75 125
PRT
Homo Sapiens 125 Asn Tyr Ile Giy Ser Asp Lys Tyr Phe His Ala Arg Gly 10 Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala Ala Glu 25 Asn Ala Arg Giu Asn Ile Gin Arg Phe Phe Gly Arg Giy 40 Ser Leu Ala Asp Gin Ala Ala Asn Glii Trp Gly Arg Ser 55 Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 70 75 126 79
PRT
Homo Sapiens 126 Tyr Ile Gly Ser Asp Lys Tyr Phe His Ala Arg Gly Asn 32 ':210> <211> <212> <213> <400> Glu Ala Asn WO 01/2 1188 Gly Pro Gly Gly Asn Ile Gin Arg Gin Ala Ala Asn Arg Pro Ala Gly PCTIUS99I2 1770 Val Trp Ala Ala Glu Ala Phe Phe Gly A-rg Gly Ala Glu Trp Gly Arg Ser Gly Leu Pro Glu Lys Tyr <210> <211> <212> <213> <400> Asn Tyr Ala Ala Asn Ala Ser Leu Pro Asn <210> <211> <212> <213> <400> Tyr Ilie Ala Lys Ala Arg Leu Ala Asn His <210> <211> <212> <213> <400> Ilie Gly Lys Arg Arg Glu Ala Asp His Phe 127 78
PRT
H-omo Sapiens 127 Ile Gly Ser Lys Arg Gly Arg Glu Asn Ala Asp Gin His Mhe Arg 128 77
PRT
Homo Sapiens 128 Gly Ser Asp Arg Gly Pro Glu Asn Ilie Asp Gin Ala Phe Ary Pro Asp Lys Tyr Phe 10 Pro Gly Gly Val 25 Ile Gin Arg Phe 40 Ala Ala Asn Glu 55 Pro Ala Gly Leu Lys Tyr Phe His 10 Gly Gly Val Trp 25 Gln Arg Phe Phe 40 Ala Asn Glu Trp 55 Ala Gly Leu Pro His Ala Arg Gly Asn Tyr Trp Ala Ala Glu Ala Ile Phe Gly Arg Gly Ala Giu Trp Gly Arg Ser Gly Lys Pro Giu Lys Tyr Ala Arg Gly Asn Tyr Asp Ala Ala Giu Ala Ile Ser Gly Arg Gly Ala Glu Asp Gly Arg Ser Gly Lys Asp Glu Lys Tyr 129 76
PRT
Homo Sapiens 129 Ser Asp Lys Tyr Phe His Gly Pro Gly Gly Val Trp 25 Asn Ile Gin Arg Phe Phe 40 Gin Ala Ala Asn Glu Trp 55 Arg Pro Ala Gly Leu Pro Arg Gly Asn Tyr Asp Ala Ala Glu Ala Ile Ser Asn Arg Gly Ala Glu Asp Ser Arg Ser Gly Lys Asp Pro Lys Tyr <210> 130 WO 01/21188 <211> <212> PRT <213> Homo Sapiens <400> 130 Ilie Gly Ser Asp Lys Tyr 1 5 Lys Arg Gly Pro Giy Gly Arg Glu Asn Ile Gin Arg Ala Asp Gin Ala Ala Asn His Phe Arg Pro Ala Gly 70 PCTIUS99/2 1770 The His Ala Arg 10 Val Trp Ala Ala 25 The Phe Gly Arg 40 1lu Trp Gly Arg 55 Lieu Pro Glu Lys Gly Asn Tyr Asp Ala Ala Glu Ala Ile Ser Asn Ala Gly Ala Glu Asp Ser Leu Ser Gly Lys Asp Pro Asn Tyr Gi y Arg Giu Asp Phe Se r 1 Gi y As n Gin Arg Asp 1 Pro Ile <210> <211> <212> <213> <400> Ser Asp Gly Pro Asn Ile Gin Ala Arg Pro <210> <211> <212> <213> <400> Asp Lys Pro Gly Ile Gln Aia Ala Pro Ala <210> <211> <212> <213> <400> Lys Tyr Giy Gly Gin Arg 131 74
PRT
Homo Sapiens 131 Lys Tyr Phe Gly Gly Val Gin Arg Phe Ala Asn Glu Ala Gly Leu 132 73
PRT
Homo Sapiens 132 Tyr Phe His 5 Gly Val Trp Arg Phe Phe Asn Giu Trp Giy Leu Pro His Ala Arg Gly Asn Tyr Asp Ala Ala Lys 10 rrp Ala Ala Glu Ala Ile Ser Asn Ala Arg 25 The Gly Arg Gly Ala Glu Asp Ser Leu Ala 40 rrp Gly Arg Ser Gly Lys Asp Pro Asn His 55 Pro Glu Lys Tyr 133 72
PRT
Homo Sapiens 133 Phe His Ala Arg 5 Val Trp Ala Ala Phe Phe Gly Arg Gly Asn Tyr Asp Ala Ala Lys Arg 10 Glu Ala Ile Ser Asn Ala Arg Giu 25 Gly Ala Glu Asp Ser Leu Ala Asp Ser Gly Lys Asp Pro Asn His Phe T yr Asn Tyr Asp Ala Ala Lys Arg Gly 10 Ala Ile Ser Asn Ala Arq Giu Asn 25 Ala Giu Asp Ser Leu Ala Asp Gin WO 01/21188 Ala Ala Asn Pro Ala Gly Lys GI y Gin Al a Ala Tyr 1 GI y Arg Asn Gly Phe Val1 Phe Gi u Leu <210> <211> <212> <213> <400> Tyr Phe Gly Val Arg Phe Asn Glu Gly Leu (210> <211> <212> <213> <400> Phe His Val Trp Phe Phe Glu Trp Leu Pro <210> <211> <212> <213> <400> His Ala Trp Ala Phe Gly Trp Gly Pro Glu PCT/US99/2 1770 Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg 55 Leu Pro Glu Lys Tyr 134 71
PRT
Homo Sapiens 134 His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro 10 Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile 25 Phe Gly Arg Gly Ala Giu Asp Ser Leu Ala Asp Gin Ala 40 Trp Giy Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro 55 Pro Glu Lys Tyr 135
PRT
Homo Sapiens 135 Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly 5 10 Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin 25 Gly Arg Gly Ala Giu Asp Ser Leu Ala Asp Gin Ala Ala 40 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala 55 Giu Lys Tyr 136 69
PRT
Homo Sapiens 136 Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly 10 Ala Glu Ala le Ser Asn Ala Arq Glu Asn Ile Gin Arg 25 Arg Gly Ala Giu Asp Ser Leu Ala Asp Gin Ala Ala Asn 40 Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly 55 Lys Tyr <210> <211> <212> <213> <400> 137 68
PRT
Homno Sapiens 137 WO 01/21188 His Ala Arg 1 Trp Ala Ala Phe Gly Arg Trp Gly Arg Pro Glu Lys Gly Asn Tyr 5 Giu Ala Ile Giy Ala Giu Ser Gly Lys Tyr PCT/US99/2 1770 Asp Ala Ala Lys Arg Gly Pro Gly Gly Val 10 Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe 25 Asp Ser Leu Ala Asp Gin Ala Ala Asn Giu 40 Asp Pro Asn His Phe Arg Pro Ala Gly Leu 55 <210> <211> <212> <213> <400> Arg Gly Ala Glu Arg Gly Arg Ser Lays Tyr <210> <211> <212> <213> <400> Gly Asn Glu Ala Gly Ala Ser Gly Tyr <210> <211> <212> <213> <400> Asn Tyr Ala Ile Ala Giu Gly Lys 138 67
PRT
Homo Sapiens 138 Asn Tyr Asp Ala Aia Lys Arg Gly Pro Giy Gly Val Trp 10 Ala Ile Ser Asn Ala Arg Giu Asn Ile Gin Arg Phe Phe 25 Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Giu Trp 40 Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 55 139 66
PRT
Homo Sapiens 139 Tyr Asp Ala Ala Lys Arg Giy Pro Gly Gly Val Trp Ala 10 Ile Ser Asn Ala Arq Giu Asn Ile Gin Arg Phe Phe Gly 25 Giu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly 40 Lys Asp Pro Asn His Phe Arg Pro Ala Giy Leu Pro Giu 55 140
PRT
Homo Sapiens 140 Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala Ala 10 Ser Asn Ala Arg Giu Asn Ile Gin Arg Phe Phe Gly Arg 25 Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg 40 Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Giu Lys 55 WO 01/21188 <210> <211> <212> <213> <400> Asn Tyr Asp 1 Ala Ile Ser Ala Giu Asp Gly Lys Asp <210> <211> <212> <213> <400> Tyr Asp Ala 1 Ile Ser Asn GiU Asp Ser Lys Asp Pro PCTIUS99/21 770 141 64
PRT
Homo Sapiens <210> <211> <212> <213> <400> Ala Ala Asn Ala Ser Leu Pro Asn <210> <211> <212> <213> <400> Ala Lys Ala Arg Leu Ala Asn His 142 63
PRT
Homo Sapiens 142 Ala Lys Arg Gly 5 Ala Arq Giu Asn Leu Ala Asp Gin Asn His Phe Arg 55 143 62
PRT
Hlomo Sapiens 143 Lys Arg Gly Pro Arg Glu Asn Ile Ala Asp Gin Ala His Phe Arg Pro 55 144 61
PRT
Homo Sapiens 144 Axg Gly Pro Giy Glu Asn Ile Gin Asp Gin Ala Ala Phe Arg Pro Ala 55 Gly Pro Giy Gly 10 Asn Ile Gin Arg Gin Ala Ala Asri 40 Arg Pro Ala Gly Pro Gly Gly Val 10 Ile Gin Arg Phe 25 Ala Ala Asn Glu 40 Pro Ala Gly Leu Gly Gly Val Trp 10 Gin Arg Phe Phe 25 Ala Asn Glu Trp 40 Ala Gly Leu Pro Gly Val Trp Ala 10 Arq Phe Phe Gly 25 Asn Giu Trp Gly 40 Gly Leu Pro Giu Val Trp Ala Ala Giu Phe Phe Gly Arg Gly Glu Trp Gly Arg Ser Leu Pro Glu Lys Tyr Trp Ala Ala Glu Ala Phe Gly Arg Gly Ala Trp Gly Arg Ser Gly Pro Giu Lys Tyr Ala Ala Glu Ala Ilie Gly Arg Gly Ala Glu Gly Arg Ser Gly Lys Giu Lys Tyr Ala Glu Ala Ile Ser Arg Gly Ala Glu Asp Arg Ser Gly Lys Asp Lys Tyr <210> 145 <211> WO 01/21188 <212> <2 13> <400> Ala Lys Arg 1 Ala Arg Glu Leu Ala Asp Asn His Phe <210> <211> <212> <213> <400> Lys Arg Gly 1 Arg Glu Asn Ala Asp Gin His Phe Arg PCTIUS99I2 1770
PRT
Homo SapienE 145 Gly Pro Gly 5 Asn Ile Gin Gin Ala Ala Arg Pro Ala 146 59
PRT
Homo Sapiens, 146 Pro Gly Gly 5 Ile Gin Arg Ala Ala Asn Pro Ala Gly Gly Val Trp Ala Ala Arq Phe Phe Gly Arg 25 Asn Glu Trp, Giy Arg 40 Gly Leu Pro Giu Lys 55 Glu Ala Ilie Ser Asn Gly Ala Giu Asp Ser Ser Giy Lys Asp Pro Tyr Ala Ile Ser Asn Ala Ala Glu Asp Ser Leu Gly Lys Asp Pro Asn Val Trp, Ala Phe Phe Gly 25 Giu Trp Gly 40 Leu Pro Giu <210> 147 <211> 58 <212> PRT <213> Homo Sapiens <400> 147 Gly Pro Gly Giy Val Asn Ile Gin Arg Phe Gin Ala Ala Asn Giu Arg Pro Ala Gly Leu Trp Ala Ala Phe Giy Arg 25 Trp Giy Arg 40 Pro Giu Lys Ala Ile Ser Asn Ala Arg Ala Glu Asp Ser Leu Ala Gly Lys Asp Pro Asn His <210> <211> <212> <213> <400> Pro Gly Ile Gin Ala Ala Pro Ala 148 57
PRT
Homno Sapiens 148 Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Giu 10 Arg Phe Phe Gly Arg Gly Ala Giu Asp Ser Leu Ala Asp 25 Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe 40 Gly Leu Pro Glu Lys Tyr <210> <211> <212> <213> 149 56
PRT
Homno Sapiens WO 01/21188 WO 0121188PCT/US99/2 1770 Pro 1 Ile Al a Pro Gly 1 Gin Al a Al a Gly 1 Arg Asri Gly Val1 1 Phe Glu Leu <400> Gly Gly Gin Arg Ala Asn Ala Gly <210> <211> <212> <213> <400> Gly Val Arg Phe Asn Glu Gly Leu <210> <211> <212> <213> <400> Val Trp Phe Phe Glu Trp Leu Pro <210> <211> <212> <213> <400> Trp Ala Phe Gly Trp Gly Pro Glu 150
PRT
Homo Sapiens 150 Trp Ala Ala Glu 5 Phe Gly Arg Gly Trp Gly Arg Ser Pro Glu Lys Tyr Glu Ala Ile Ser Asn Ala Arg Giu Asn 10 Gly Ala Glu Asp Ser Leu Ala Asp Gln Ser Gly Lys Asp Pro Asn His Phe Arg 40 Tyr Ala Ile Ser Asn Ala Arg Glu Asn Ile 10 Ala Glu Asp Ser Leu Ala Asp Gin Ala 25 Gly Lys Asp Pro Asn His Phe Arg Pro 40 Ile Ser Asn Ala Arg Glu Asn Ile Gln 10 Glu Asp Ser Leu Ala Asp Gin Ala Ala 25 Lys Asp Pro Asn His Phe Arg Pro Ala 40 151 54
PRT
Homo Sapiens 151 Ala Ala Glu 5 Gly Arq Gly Gly Arg Ser Glu Lys Tyr 152 53
PRT
Homo Sapiens 152 Ala Glu Ala 5 Arg Gly Ala Arg Ser Gly Lys Tyr 153 52
PRT
Homo Sapiens 153 [le Ser Asn Ala Arg Glu Asn Ile Gin Arg 10 3lu Asp Ser Leu Ala Asp Gln Ala Ala Asn 25 Lys Asp Pro Asn His Phe Arg Pro Ala Gly 40 <210> <211> <212> <213> <400> WO 01/21188 PCT/US99/2 1770 Trp Ala Ala Giu Ala Ile Ser Asn Ala Arg Giu Asn Ile Gin Arg Phe 1 5 10 Phe Gly Arg Gly Ala Giu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu 25 Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu 40 Pro Glu Lys Tyr <210> 154 <211> 51 <212> PRT <213> Homo Sapiens <400> 154 Ala Ala Giu Ala Ile Ser Asn Ala Arg Giu Asn Ile Gin Arg Phe Phe 1 5 10 Gly Arg Gly Ala Giu Asp Ser Leu Ala Asp Gin Ala Ala Asn Giu Trp 25 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 40 Giu Lys Tyr <210> 155 <211> 51 <212> PRT <213> Homo Sapiens <400> 155 Ala Ala Giu Ala Ile Ser Asn Ala Arg Giu Asn Ile Gin Arg Phe Phe 1 5 10 Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Giu Trp 25 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 40 Giu Lys Tyr <210> 156 <211> 49 <212> PRT <213> Homno Sapiens <400> 156 Giu Ala Ile Ser Asn Ala Arg Giu Asn Ile Gin Arg Phe Phe Gly Arg 1 5 10 Gly Ala Giu Asp Ser Leu Ala Asp Gin Ala Ala Asn Giu Trp Gly Arg 25 Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Giu Lys 40 Tyr <210> 157 <211> 48 <212> PRT <213> Homo Sapiens <400> 157 Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly Arg Giy 1 5 10 WO 01/21188 Ala Glu Asp Gly Lys Asp <210> <211> <212> <213> <400> Ile Ser Asn 1 Glu Asp Ser Lys Asp Pro <210> <211> <212> <213> <400> Ser Asn Ala 1 Asp Ser Leu Asp Pro Asn <210> <211> <212> <213> <400> Asn Ala Arg 1 Ser Leu Ala Pro Asn His <210> <211> <212> <213> <400> Ala Arq Glu 1 Leu Ala Asp Asn His Phe <210> <211> <212> <213> PCT/US99/2 1770 Ser Leu Ala Asp Gin Ala Ala Asn Giu Trp Gly Arg Ser 25 Pro Asn His Phe Arg Pro Ala Gly Leu Pro Giu Lys Tyr 40 158 47
PRT
Homo Sapiens 158 Ala Arg Glu Asn 5 Leu Ala Asp Gin Asn His Phe Arg 159 46
PRT
Homo Sapiens 159 Arg Giu Asn Ile 5 Ala Asp Gin Ala His Phe Arg Pro 160
PRT
Homo Sapiens 160 Giu Asn Ilie Gin 5 Asp Gin Ala Ala Phe Arg Pro Ala 161 44
PRT
Homo Sapiens 161 Asn Ilie Gin Arg 5 Gin Ala Ala Asn Arg Pro Ala Gly Ile Gin Arg Phe Phe 10 Ala Ala Asn Giu Trp 25 Pro Ala Gly Leu Pro 40 Gin Arg Phe Phe Gly 10 Ala Asn Giu Trp Gly 25 Ala Gly Leu Pro Giu 40 Arg Phe Phe Gly Arg 10 Asn Glu Trp Gly Arg 25 Gly Leu Pro Glu Lys 40 Gly Arg Gly Ala Gly Arg Ser Gly Giu Lys Tyr Arg Gly Ala Giu Arg Ser Gly Lys Lys Tyr Gly Ala Giu Asp Ser Gly Lys Asp T yr Phe Phe Giy Arg Gly Ala Giu Asp Ser 10 Glu Trp Gly Arg Ser Gly Lys Asp Pro 25 Leu Pro Giu Lys Tyr 162 43
PRT
Homo Sapiens WO 01/21188 <400> 162 Arg Glu Asn Ile 1 Ala Asp Gin Ala His Phe Arg Pro <210> 163 <211> 42 <212> PRT <213> Hom <400> 163 Glu Asn Ile Gin 1 Asp Gin Ala Ala Phe Arg Pro Ala <210> 164 <211> 41 <212> PRT <213> Hom <400> 164 Asn Ile Gin Arg 1 Gin Ala Ala Asn Arg Pro Ala Gly <210> 165 <211> <212> PRT <213> Hor <400> 165 Ile Gin Arg Phe 1 Ala Ala Asn Glu Pro Ala Gly Leu <210> 166 <211> 39 <212> PRT <213> Homr <400> 166 Gin Arg Phe Phe 1 Ala Asn Glu Trp Ala Gly.Leu Pro <210> 167 <211> 38 PCT/US99/21770 Gin Arg Phe 5 Ala Asn Glu Ala Gly Leu o Sapiens Arg Phe Phe 5 Asn Glu Trp Gly Leu Pro o Sapiens Phe Phe Gly 5 Glu Trp Gly Leu Pro Glu o Sapiens Phe Gly Arg 5 Trp Gly Arg Pro Glu Lys Phe Gly Arg Gly Ala Glu Asp Ser Leu 10 Trp Gly Arg Ser Gly Lys Asp Pro Asn 25 Pro Glu Lys Tyr Gly Arg Gly Ala Glu Asp Ser Leu Ala 10 Gly Arg Ser Gly Lys Asp Pro Asn His 25 Glu Lys Tyr Arg Gly Ala Glu Asp Ser Leu Ala Asp 10 Arg Ser Gly Lys Asp Pro Asn His Phe 25 Lys Tyr Gly Ala Glu Asp Ser Leu Ala Asp Gin 10 Ser Gly Lys Asp Pro Asn His Phe Arg 25 Tyr o Sapiens Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala 5 10 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro 25 Glu Lys Tyr WO 01/21188 Arg 1 As n Gi y Phe 1 Glu Leu Gly 1 Gly Glu Arq 1 Arg Lys Gly 1 Ser Tyr <212> <213> <400> Phe Phe Glu Trp Leu Pro <210> <211> <212> <213> <400> Phe Gly Trp Gly Pro Glu <210> <211> <212> <213> <400> Arg Gly Arg Ser Lys Tyr <210> <211> <212> <213> <400> Gly Ala Ser Gly Tyr PCTIUS99I2 1770
PRT
Homo Sapiens 167 Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala 5 10 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arq Pro Ala 25 Glu Lys Tyr 168 37
PRT
Homo Sapiens 168 Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn 5 10 Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly 25 Lys Tyr 169
PRT
Homo Sapiens 169 Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp 5 10 Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 25 170 34
PRT
Homo Sapiens 170 Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly 5 10 Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu 25 <210> <211> <212> <213> <400> Ala Giu Gly Lys 171 33
PRT
Homo Sapiens 171 Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg 5 10 Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys 25 WO 01/21188 PCT/US99/21770 <210> <211> <212> <213> <400> Ala Glu Asp 1 Gly Lys Asp <210> <211> <212> <213> <400> Glu Asp Ser 1 Lys Asp Pro <210> <211> <212> <213> <400> Asp Ser Leu 1 Asp Pro Asn <210> <211> <212> <213> <400> Ser Leu Ala 1 Pro Asn His <210> <211> <212> <213> <400> Leu Ala Asp 1 Asn His Phe <210> <211> <212> <213> <400> 172 32
PRT
Homo Sapiens 172 Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg Ser 5 10 Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 25 173 31
PRT
Homo Sapiens 173 Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly 5 10 Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 25 174
PRT
Homo Sapiens 174 Ala Asp Gln Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys 5 10 His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 25 175 29
PRT
Homo Sapiens 175 Asp Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp 5 10 Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 176 28
PRT
Homo Sapiens 176 Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro 5 10 Arg Pro Ala Gly Leu Pro Glu Lys Tyr 177 27
PRT
Homo Sapiens 177 WO 01/21188 Ala Asp Gin 1 His Phe Arg <210> <211> (212> (213> <400> Asp Gin Ala 1 Phe Arg Pro <210> <211> <212> (213> <400> Gin Ala Ala 1 Arg Pro Ala (210> <211> <212> <213> <400> Ala Ala Asn 1 Pro Ala Gly <210> <211> <212> <213> <400> Ala Asn Glu 1 Ala Gly Leu <210> <211> <212> <213> <400> Asn Glu Trp 1 Gly Leu Pro PCTIUS99I2 1770 Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn 5 10 Pro Ala Gly Leu Pro Glu Lys Tyr 178 26
PRT
Homo Sapiens 178 Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His 5 10 Ala Gly Leu Pro Glu Lys Tyr 179
PRT
Homo Sapiens 179 Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe 5 10 Gly Leu Pro Glu Lys Tyr 180 24
PRT
Homo Sapiens 180 Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg 5 10 Leu Pro Glu Lys Tyr 181 23
PRT
Homo Sapiens 181 Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro 5 10 Pro Glu Lys Tyr 182 22
PRT
Homo Sapiens 182 Gly Arq Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala 5 10 Glu Lys Tyr <210> 183 <211> 21 WO 01/21188 PCT/US99/21770 <212> PRT <213> Homo Sapiens <400> 183 Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly 1 5 10 Leu Pro Glu Lys Tyr <210> 184 <211> <212> PRT <213> Homo Sapiens <400> 184 Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu 1 5 10 Pro Glu Lys Tyr <210> 185 <211> 19 <212> PRT <213> Homo Sapiens <400> 185 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 1 5 10 Glu Lys Tyr <210> 186 <211> 18 <212> PRT <213> Homo Sapiens <400> 186 Arq Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu 1 5 10 Lys Tyr <210> <211> <212> <213> 187 17
PRT
Homo Sapiens <400> 187 Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys 1 5 10 Tyr <210> <211> <212> <213> 188 16
PRT
Homo Sapiens <400> 188 Gly Lys Asp Pro Asn His Phe Arg Pro 1 5 Ala Gly Leu Pro Glu Lys Tyr 10 WO 01/21188 <210> 189 <211> <212> PRT <213> Homo Sapiens PCT1JS99/21 770 <400> 189 Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 10 <210> 190 <211> 14 <212> PRT <213> Homno Sapiens <400> 190 Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 <210> <211> <212> <213> 191 13
PRT
Homo Sapiens <400> 191 Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 <210> 192 <211> 12 <212> PRT <213> Homo Sapiens <400> 192 Asn His Phe Arg Pro Ala Gly Leu Pro 1 5 Glu Lys Tyr '210> 193 <211> 11 <212> PRT <213> Homo Sapiens <400> 193 His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 <210> 194 <211> <212> PRT <213> Homo Sapiens <400> 194 Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 <210> 195 (211> 9 <212> PRT <213> Homo Sapiens <400> 195 Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 WO 01/21188 WO 01/1 188PCTIUS99/2 1770 <210> 196 <211> 8 <212> PRT <213> Homo Sapiens <400> 196 Pro Ala Gly Leu Pro Glu Lys Tyr 1 <210> 197 <211> 7 <212> PRT <213> Homo Sapiens <400> 197 Ala Gly Leu Pro Glu Lys Tyr 1 <210> 198 <211> 6 <212> PRT <213> Homno Sapiens <400> 198 Gly Leu Pro Glu Lys Tyr 1 <210> 199 <211> <212> PRT <213> Homo Sapiens <400> 199 Leu Pro Glu Lys Tyr 1 <210> 200 <211> 4 <212> PRT <213> Homo Sapiens <400> 200 Pro Giu Lys Tyr <210> 201 <211> 99 <212> PRT <213> Homo Sapiens <400> 201 Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg Asp Met Trp Arg Ala Tyr 1 5 10 Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His 25 Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp 40 Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe 55 Gly Arq Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp 70 75 WO 01/21188 PCT/US99/21770 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 90 Glu Lys Tyr <210> 202 <211> 97 <212> PRT <213> Homo Sapiens <400> 202 Gly Glu Ala Phe Asp Gly Ala Arg Asp Met Trp Arg Ala Tyr Ser Asp 1 5 10 Met Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His Ala Arg 25 Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala Ala 40 Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly Arg 55 Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg 70 75 Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys 90 Tyr <210> 203 <211> 99 <212> PRT <213> Homo Sapiens <400> 203 Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg Asp Met Trp Arg Ala Tyr 1 5 10 Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His 25 Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp 40 Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe 55 Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp 70 75 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 90 Glu Lys Tyr <210> 204 <211> 101 <212> PRT <213> Homo Sapiens <400> 204 Phe Ser Phe Leu Gly Glu Ala Phe Asp Gly Ala Arg Asp Met Trp Arg 1 5 10 Ala Tyr Ser Asp Met Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr 25 Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly 40 Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg 55 Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn 49 WO 01/21188 Giu Trp Gly Leu Pro Glu PCT/US99/2 1770 70 75 Azg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly 90 Lys Tyr 100 205 100
PRT
Homo Sapiens <210> <211> <212> <213> <400> Phe Leu Ser Asp Ala Arg Ala Ala Gly Arg cGly Arg Glu Lys <210> <211> <212> <213> <400> Leu Gly Asp Met Arg Gly Ala Glu Arg Gly Arg Ser Lys Tyr 206 99
PRT
Homo Sapiens 206 Glu Ala Phe Arg Glu Ala Asn Tyr Asp Ala Ile Ser Ala Glu Asp Gly Lys Asp <210> <211> <212> (213> <400> Leu Gly Glu 207 98
PRT
Homo Sapiens 207 Ala Phe Asp Gly Ala Arg Asp Met Trp Arg Ala Tyr Ser 10 Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His Ala 25 Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala 40 Ilie Ser Asn Ala Arig Glu Asn Ile Gin. Arg Phe Phe Gly 55 Asp Arg Ala Met Arg Gly Asn Glu Ala WO 01/21188 Arg Gly Ala Arg Ser Gly Lys Tyr PCT/US99/21770 Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly 70 75 Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu 90 Gly 1 Met Gly Glu Gly Ser Tyr Glu 1 Arg Asn Ala Ala Gly Ala 1 Glu Tyr Ile Glu <210> <211> <212> <213> <400> Glu Ala Arg Glu Asn Tyr Ala Ile Ala Glu Gly Lys <210> <211> <212> <213> <400> Ala Phe Glu Ala Tyr Asp Ile Ser Glu Asp Lys Asp <210> <211> <212> <213> <400> Phe Asp Ala Asn Asp Ala Ser Asn Asp Ser 208 97
PRT
Homo Sapiens 208 Phe Asp Gly Ala Arg Asp Met Trp Arg Ala Tyr 5 10 Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His 25 Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp 40 Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe 55 Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp 70 75 Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 90 209 96
PRT
Homo Sapiens 209 Asp Gly Ala Arg Asp Met Trp Arg Ala Tyr Ser 5 10 Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His Ala 25 Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala 40 Asn Ala Arg Glu Asn ile Gin Arg Phe Phe Gly 55 Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly 70 75 Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu 90 210
PRT
Homo Sapiens 210 Gly Ala Arg Asp Met Trp Arg Ala Tyr Ser Asp 5 10 Tyr lie Gly Ser Asp Lys Tyr Phe His Ala Arg 25 Ala Lys Arg Gly Pro Gly Gly Val Trp Ala Ala 40 Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly Arg 55 Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg 51 Ser Asp Ala Arg Ala Ala Gly Arg Gly Arg Glu Lys Asp Met Arg Gly Ala Glu Arg Gly Arg Ser Lys Tyr Met Arg Gly Asn Glu Ala Gly Ala Ser Gly WO 01/2 1188 Lys Asp Phe Asp 1 Ala Asn Asp Ala Ser Asn Asp Ser Asp Pro Asp Gly 1 Asn Tyr Ala Ala Asn Ala Ser Leu Pro Asn PCTIUS99/21770 70 75 Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 90 210> 211> 212> 213> 400> Gly Tyr Ala Ala Leu Asn 210> 211> 212> 213> 400> Ala Ile Lys Arg Ala His 211 94
PRT
Homo Sapiens 211 Ala Arg Asp 1 5 Ilie Giy Ser Lys Arg Gly Arg Giu Asn Ala Asp Gin 70 His Phe Arg 212 93
PRT
Homo Sapiens 212 Arg Asp Met 5 Gly Ser Asp Arg Giy Pro Glu Asn Ile Asp Gin Ala 70 Phe Arg Pro 213 92
PRT
Homo Sapiens 213 Asp Met Trp Ser Asp Lys Gly Pro Gly Asn Ile Gin Gin Ala Ala Arg Pro Ala Arg Giu is Asn Tyr Ala Ile Ala Giu Gly Lys Giu Ala Tyr Asp Ile Ser Glu Asp Lys Asp <210> <211> <212> <213> <400> Ala Arg Ile Gly Lys Arg Arq Giu Ala Asp His Phe Met Arg Giu Ala Asn Gly Asn Tyr Asp Ala Giu Ala Ile Ser Asn Gly Ala Glu Asp Ser Ser Gly Lys Asp Pro Tyr <210> 214 WO 01/21188 <211> <212> <213> <400> Ala Arg Asp 1 Ile Gly Ser Lys Arg Gly Arg Giu Asn Ala Asp Gin His Phe Arg <210> <211) <212> <213> <400> Arg Asp Met 1 Giy Ser Asp Arg Gly Pro Glu Asn Ile Asp Gin Ala Phe Arg Pro <210> <211> <212> <213> <400> Asp Met Trp 1 Ser Asp Lys Giy Pro Gly Asn Ile Gin Gin Ala Ala Ara Pro Ala PCT/US99/21 770 91
PRT
Homo Sapiens 215
PRT
Homo Sapiens Met Arg Glu Ala Asn Gly Asn Tyr Asp Ala Glu Ala Ile Ser Asn Gly Ala Glu Asp Ser Ser Gly Lys Asp Pro Tyr Arg Glu Aia Asn Tyr Asn Tyr Asp Ala Ala Ala Ile Ser Asn Ala Ala Giu Asp Ser Leu Gly Lys Asp Pro Asn Giu Aia Asn Tyr Ile Tyr Asp Ala Ala Lys Ile Ser Asn Ala Arg Giu Asp Ser Leu Ala Lys Asp Pro Asn His 216 89
PRT
Homo Sapiens 216 Arg Ala Tyr 5 Tyr Phe His Gly Val Trp Arg Phe Phe Asn Glu Trp 70 Gly Leu Pro <210> 217 <211> 88 <212> PRT <213> Homo Sapiens <400> 217 WO 01/21 188 Met Trp 1 Asp Lys Pro Gly Ile Gin Ala Ala Pro Ala PCTIUS99/2 1770 Arg Giu Ala Asn Tyr Ile Giy Ser 10 Asn Tyr Asp Ala Ala Lys Arg Gly Ala Ile Ser Asn Ala Arg Glu Asn Ala Glu Asp Ser Leu Ala Asp Gin Giy Lys Asp Pro Asn His Phe Arg 75 T rp Lys Gly Gin Ala Al a Arg Tyr Gi y Arg Asn Gi y Al a 1 Phe Val <210> <211> <212> <213> <400> Arg Ala Tyr Phe Gly Val Arg Phe Asn Glu Gly Leu <2 10> <211> <212> <213> <400> Ala Tyr Phe His Val Trp Phe Phe Glu Trp Leu Pro <210> <211> <212> <213> <400> Tyr Ser His Ala Trp Ala 218 87
PRT
Homo Sapiens 218 Tyr Ser Asp1 His Ala Arg( Trp Ala Ala( Phe Gly Arq Trp Gly Arq 70 Pro Giu Lys 219 86
PRT
Homo Sapiens 219 Ser Asp Met Ala Arg Gly Ala Ala Glu Gly Arg Gly Gly Arg Ser 7 0 Glu Lys Tyr Arq Glu Ala Asn Tyr Ile Gly Ser Asp 10 Asn Tyr Asp Ala Ala Lys Arg Gly Pro 25 Ala Ile Ser Asn Ala Arg Glu Asn Ile 40 Ala Glu Asp Ser Leu Ala Asp Gln Ala Gly Lys Asp Pro Asn His Phe Arg Pro 75 Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys 10 Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly 25 Aila Ile Ser Asn Ala Arg Glu Asn Ile Gin 40 k1a Glu Asp Ser Leu Ala Asp Gin Ala Ala 55 1ly Lys Asp Pro Asn His Phe Arg Pro Ala 75 220
PRT
Homo Sapiens 220 Asp Met Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr 5 10 Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly 25 Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arq 54 WO 01/21188 Phe Phe Gly Giu Trp Gly Leu Pro Giu Tyr 1 His T rp Phe Trp Pro Ser 1l Ala Gi y Gly Glu Asp Arg Ala Arg Arg <210> <211> <212> <213> <400> Ser Asp Ala Arg Ala Ala Gly Arg Gly Arg Giu Lys <210> <211> <212> <213> <400> Asp Met Arg Gly Ala Glu Arg Gly Arg Ser Lys Tyr <210> <211> <212> <213> <400> Met Arg Gly Asn Glu Ala Gly Ala Ser Gly PCT/US99/2 1770 40 Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn 55 Arq Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly 70 75 Lys Tyr 221 84
PRT
Homo Sapiens 221 Met Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe 5 10 Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val 25 Giu Ala Ile Ser Asn Ala Arg Giu Asn Ile Gin Arg Phe 40 Gly Ala Glu Asp Ser Leu Ala Asp Gln Ala Ala Asn Giu 55 Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu 70 75 Tyr 222 83
PRT
Homo Sapiens 222 Arg Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His 5 10 Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp 20 25 Ala Ile Ser Asn Ala Ary Glu Asn Ile Gin Arcj Phe Phe 40 Ala Glu Asp Ser Leu Ala Asp Gln Ala Ala Asn Glu Trp 55 Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 70 75 223 82
PRT
Homo Sapiens 223 .Glu Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His Ala 10 Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala 25 Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly 40 Giu Asp Ser Leu Ala Asp Gin Ala Ala Asn Giu Trp Gly 55 Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Giu 70 75 WO 01/21 188 Lys Tyr PCT/US99/2 1770 Met Gly Glu Gi y Se r Tyr <210> <211> <212> <213> <400> Arg Glu Asn Tyr Ala Ile Ala Glu Gly Lys 224 81
PRT
Homo Sapiens 224 Ala Asn Tyr Ile Gly Ser Asp Lys Tyr Phe His Ala Arg 10 Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala Ala 25 Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly Arg 40 Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg 55 Asp Pro Asri His Phe Arg Pro Ala Gly Leu Pro Glu Lys 70 75 Arg Asn Ala Al a Gly Glu Tyr Ile Gi u Lys <210> <211> <212> <213> <400> Glu Ala Tyr Asp Ile Ser Glu Asp Lys Asp <210> <211> <212> <213> <400> Ala Asn Asp Ala Ser Asn Asp Ser Asp Pro 225
PRT
Homo Sapiens 225 Asn Tyr Ile Ala Ala Lys2 Asn Ala Arq Ser Leu Ala Pro Asn His 70 226 79
PRT
Homo Sapiens 226 Tyr Ile Gly Ala Lys Arg Ala Arg Glu2 Leu Ala Asp Asn His Phe2 70 31y Ser Asp Lys 10 krg Gly Pro Gly 25 1lu Asn Ile GIn 40 %sp Gin Ala Ala 55 ?he Arg Pro Ala Ser Asp Lys Tyr 10 31y Pro Gly Gly 25 Nsn Ile Gin Arq 40 31n Ala Ala Asn 55 N.rg Pro Ala Giy Tyr Phe His Ala Arg Gly Val Trp Ala Ala Arq Phe Phe Gly Arg Asn Glu Trp Gly Arg Gly Leu Pro Glu Lys Phe His Ala Arg Gly Val Trp Ala Ala Glu Phe Phe Gly Arg Gly Giu Trp Gly Arg Ser Leu Pro Glu Lys Tyr <210> 227 <211> 78 <212> PRT <213> Homo Sapiens <400> 227 WO 01/21188 Ala Asn 1 Asp Ala Ser Asn Asp Ser Asp Pro Asp Lys Tyr Phe 10 Pro Gly Gly Val Ile Gin Arg Phe Ala Ala Asn Glu 55 Pro Ala Gly Leu PCT/US99/21770 His Ala Arg Gly Asn Tyr Trp Ala Ala Glu Ala Ile Phe Gly Arg Gly Ala Glu Trp Gly Arg Ser Gly Lys Pro Glu Lys Tyr <210> <211> <212> <213> <400> Tyr Ile Ala Lys Ala Arg Leu Ala Asn His <210> <211> <212> <213> <400> Ile Gly Lys Arg Arg Glu Ala Asp His Phe <210> <211> <212> <213> <400> Gly Ser Arg Gly Glu Asn Asp Gin Phe Arg 228 77
PRT
Homo Sapiens 228 Gly Ser Asp Arg Gly Pro Glu Asn Ile Asp Gin Ala Phe Arg Pro 229 76
PRT
Homo Sapiens 229 Ser Asp Lys Gly Pro Gly Asn Ile Gin Gin Ala Ala Arg Pro Ala Lys Tyr Phe His 10 Gly Gly Val Trp 25 Gin Arg Phe Phe 40 Ala Asn Glu Trp 55 Ala Gly Leu Pro Tyr Phe His Ala 10 Gly Val Trp Ala 25 Arg Phe Phe Gly 40 Asn Glu Trp Gly 55 Gly Leu Pro Glu Ala Arg Gly Asn Tyr Asp Ala Ala Glu Ala Ile Ser Gly Arg Gly Ala Glu Asp Gly Arg Ser Gly Lys Asp Glu Lys Tyr Arg Gly Asn Tyr Asp Ala Ala Glu Ala Ile Ser Asn Arg Gly Ala Glu Asp Ser Arg Ser Gly Lys Asp Pro Lys Tyr Ile 1 Lys Arg Ala His 230
PRT
Homo Sapiens 230 Asp Lys Tyr Phe His Ala 5 Pro Gly Gly Val Trp Ala 25 Ile Gin Arg Phe Phe Gly 40 Ala Ala Asn Glu Trp Gly 55 Pro Ala Gly Leu Pro Glu 70 Gly Asn Tyr Asp Ala Ala Glu Ala Ile Ser Asn Ala Gly Ala Glu Asp Ser Leu Ser Gly Lys Asp Pro Asn Tyr WO 01/21188 <210> <211i> <212> <213> <400> Gly Ser Asp 1 Arg Gly Pro Glu Asn Ile Asp Gin Ala Phe Arg Pro <210> <211> <212> <213> <400> Ser Asp Lys 1 Gly Pro Gly Asn Ile Gin Gin Ala Ala Arg Pro Ala <210> <211> <212> <213> <400> Asp Lys Tyr 1 Pro Gly Gly Ile Gin Arg Ala Ala Asn Pro Ala Gly <210> <211> <212> <213> <400> Lys Tyr Phe 1 Gly Gly Val Gin Arg Phe PCTIUS99I2 1770 231 74
PRT
Homo Sapiens 231 Lys Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys 5 10 Gly Gly Val Trp Ala Ala Giu Ala Ile Ser Asn Ala Arg 25 Gin Arq Phe Phe Gly Arq Gly Ala Glu Asp Ser Leu Ala 40 Ala Asn Giu Trp Giy Arq Ser Gly Lys Asp Pro Asn His 55 Ala Giy Leu Pro Glu Lys Tyr 232 73
PRT
Homo Sapiens 232 Tyr Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg 5 10 Gly Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu 25 Arg Phe Phe Gly Arq Gly Ala Glu Asp Ser Leu Ala Asp 40 Asn Giu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe 55 Gly Leu Pro Glu Lys Tyr 233 72
PRT
Homo Sapiens 233 Phe His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly 5 10 Val Trp Ala Ala Glu Ala Ile Ser Asn Ala Arg Gin Asn 25 Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin 40 Gin Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg 55 Leu Pro Glu Lys Tyr 234 71
PRT
Homo Sapiens 234 His Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro 5 10 Trp Ala Ala Gin Ala Ile Ser Asn Ala Arg Gin Asn Ile 25 Phe Gly Arg Gly Ala Gin Asp Ser Leu Ala Asp Gin Ala 58 WO 01/21188 Ala Asn Glu Ala Gly Leu Tyr 1 Gl y Arg Asn Gly Phe ValI Phe Giu Leu His Trp Phe T rp Pro <210> <211> <212> <213> <400> Phe His Val Trp Phe Phe Giu Trp Leu Pro <210> <211> <2 12> <213> <400> His Ala Trp Ala Phe Gly Trp Gly Pro Glu <210> <211> <212> <213> <400> Ala Arg Ala Ala Gly Arg Gly Arg Glu Lys PCT/US99/2 1770 40 Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro 55 Pro Glu Lys Tyr 235
PRT
Homo Sapiens 235 Ala Arg Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly 5 10 Ala Ala Giu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin 25 Gly Arg Gly Ala Giu Asp Ser Leu Ala Asp Gin Ala Ala 40 Gly Arg Ser Gly Lys Asp Pro Asn. His Phe Arg Pro Ala 55 Glu Lys Tyr 236 69
PRT
Homo Sapiens 236 Arg Giy Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly 10 Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg 25 Arg Gly Ala Glu Asp Ser Leu Ala Asp Gln Ala Ala Asn 40 Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly 55 Lys Tyr 237 68
PRT
Homo Sapiens 237 Gly Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val 10 Giu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe 25 Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Giu 40 Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu 55 Tyr <210> <211> <212> <213> 238 67
PRT
Homo Sapiens WO 01/21188 <400> Ala Arg Gly 1 Ala Ala Glu Gly Arg Gly Gly Arg Ser Glu Lys Tyr <210> <211> <212> <213> <400> Gly Asn Glu Ala Gly Ala Ser Gly Tyr <210> <211> <212> <213> <400> Asn Tyr Ala Ile Ala Glu Gly Lys <210> <211> <212> <213> <400> Tyr Asp Ile Ser Glu Asp Lys Asp PCT/US99/21770 238 Asn Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp 5. 10 Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe 25 Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp 40 Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 55 239 66
PRT
Homo Sapiens 239 Tyr Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala 10 Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly 25 Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly 40 Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu 55 240
PRT
Homo Sapiens 240 Asp Ala Ala Lys Arg Gly Pro Gly Gly Val Trp Ala Ala 10 Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly Arg 25 Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg 40 Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys 55 241 64
PRT
Homo Sapiens Asn 1 Ala Ala Gly 241 Ala Ala Lys Arg Gly Pro 5 Asn Ala Arg Glu Asn Ile 25 Ser Leu Ala Asp Gin Ala 40 Pro Asn His Phe Arg Pro Gly Gly Val Trp Ala Ala Glu 10 Gin Arg Phe Phe Gly Arg Gly Ala Asn Glu Trp Gly Arg Ser Ala Gly Leu Pro Glu Lys Tyr <210> 242 WO 01/21188 <211> <212> <213> <400> Tyr Asp Ala 1 Ile Ser Asn Giu Asp Ser Lys Asp Pro <210> <211> <212> <213> <400> Asp Ala Ala
I
Ser Asn Ala Asp Ser Leu Asp Pro Asn PCTIUS99/21770 63
PRT
Homo Sapiens 242 Ala Lys ArgC 5 Ala Arg Giu 1 Leu Ala Asp Asn His Phe I 243 62
PRT
Homo Sapiens 243 Lys Arg Gly 1 5 Arg Giu Asn Ala Asp Gin I His Phe Arg I 244 61
PRT
Homo Sapiens Pro Gly Gly Val 10 Ile Gin Arg Phe 25 Ala Ala Asn Glu 40 Pro Ala Gly Leu Gly Gly Val Trp 10 Gin Arg Phe Phe 25 Ala Asn Glu Trp 40 Ala Gly Leu Pro Trp Ala Ala Glu Ala Phe Giy Arg Gly Ala Trp Gly Arg Ser Gly Pro Glu Lys Tyr Ala Ala Glu Ala Ile Gly Arg Gly Ala Giu Gly Arg Ser Gly Lys Glu Lys Tyr <210> (211> <212> (213> <400> Ala Lys Ala Arg Leu Ala Asn His <210> <211> <212> <213> <400> Lys Arg Arg Glu Ala Asp His Phe Gly Val Trp Ala Arg Phe Phe Gly Asn Giu Trp Gly 40 Gly Leu Pro Glu Ala Glu Ala Ile Ser Arg Gly Ala Glu Asp Arg Ser Gly Lys Asp Lys Tyr 245
PRT
Homo Sapiens Val Trp Ala Ala Phe Phe Gly Arg Glu Trp Gly Arg 40 Leu Pro Glu Lys Glu Ala Ile Ser Asn Gly Ala Giu Asp Ser Ser Gly Lys Asp Pro Tyr <210> 246 <211> 59 <212> PRT WO 01/21188 WO 0121188PCT/US99/2 1770 Lys 1 Arg Ala His Arg 1 Giu Asp Phe Gly 1 As n Gin Arg Pro 1 Ilie Al a Pro <213> <400> Arg Gly Giu Asn Asp Gin Phe Arg <210> <211> <212> <213> <400> Gly Pro Asn Ilie Gin Ala Arg Pro <210> <211> <212> <213> <400> Pro Giy Ile Gin Ala Ala Pro Ala <210> <211> <212> <213> <400> Gly Gly Gin Arg Ala Asn Ala Giy Homo Sapiens 246 Pro Gly Giy 5 Ile Gin Arg Ala Ala Asn Pro Ala Gly 247 58
PRT
Homo Sapiens 247 Gly Giy Val 5 Gin Arg Phe Ala Asn Giu Ala Giy Leu 248 57
PRT
Homo Sapiens 248 Giy Val Trp 5 Arg Phe Phe Asn Giu Trp Giy Leu Pro 249 56
PRT
Homo Sapiens 249 Vai Trp Aiaj 5 Phe Phe Gly Giu Trp Gly Leu Pro GiuI 250
PRT
Homo Sapiens Trp Ala Ala Giu Ala Ile Ser Asn Ala 10 Phe Gly Arg Gly Ala Giu Asp Ser Leu 25 Trp Gly Arg Ser Giy Lys Asp Pro Asn 40 Pro Giu Lys Tyr Ala Ala Glu Ala Ile Ser Asn Ala Arg 10 Gly Arg Giy Aia Giu Asp Ser Leu Ala 25 Gly Arg Ser Giy Lys Asp Pro Asn His 40 Giu Lys Tyr Ala Glu Ala Ile Ser Asn Ala Arg Glu 10 Arg Gly Ala Glu Asp Ser Leu Ala Asp 25 Arg Ser Gly Lys Asp Pro Asn His Phe 40 Lys Tyr Glu Ala Ile Ser Asn Ala Arg Glu Asn 10 Gly Ala Giu Asp Ser Leu Ala Asp Gin 25 Ser Gly Lys Asp Pro Asn His Phe Arg 40 Tyr <210> <211> <212> <213> WO 01/21188 WO 0121188PCT/US99/21770 Gly 1 Gin Ala Ala Gly 1 Arg Asn Gly Val1 1 Phe Glu Le u Trp 1 Phe Trp Pro (400> Gly Val Arg Phe Asn Glu Gly Leu <210> <211> <212> (213> (400> Val Trp Phe Phe Glu Trp Leu Pro <210> <211> <2 12> <213> <400> Trp Ala Phe Gly Trp Gly Pro Glu <210> <211> <212> <213> <400> Ala Ala Gly Arg Gl~y Arg Glu Lys Trp Ala Ala Giu Ala Ile Ser Asn Ala Arg Giu Asn Ile 5 10 Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala 25 Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro 40 Pro Glu Lys Tyr 251 54
PRT
Homo Sapiens 251 Ala Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin 5 10 Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala 25 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala 40 Glu Lys Tyr 252 53
PRT
Homno Sapiens 252 Ala Giu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gln Arg 5 1.0 Arg Gly Ala Giu Asp Ser Leu Ala Asp Gin Ala Ala Asn 25 Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly 40 Lys Tyr 253 52
PRT
Homo Sapiens 253 Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe 5 10 Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Giu 25 Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu 40 T yr 254 51
PRT
Homo Sapiens 254 Ala Ile Ser Asn Ala Arg Giu Asn Ile Gln Arg ?he Phe 63 <210> <211> <212> <213> <400> Ala Ala Glu WO 01/21188 PCT/US99/21770 1 5 10 Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp 25 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 40 Glu Lys Tyr <210> 255 <211> <212> PRT <213> Homo Sapiens <400> 255 Ala Glu Ala Ile Ser Asn Ala Arg Glu Asn Ile Gin Arg Phe Phe Gly 1 5 10 Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly 25 Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Giu 40 Lys Tyr <210> 256 <211> 49 <212> PRT <213> Homno Sapiens <400> 256 Glu Ala Ile Ser Asn Ala Arg Giu Asn Ile Gin Arg Phe Phe Gly Arg 1 5 10 Gly Ala Giu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Giy Arg 25 Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys 40 Tyr <210> 257 <211> 48 <212> PRT <213> Homo Sapiens <400> 257 Ala Ile Ser Asn Ala Arg Giu Asn Ile Gin Arg Phe Phe Gly Arg Gly 1 5 10 Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Giu Trp Gly Arg Ser 25 Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 40 <210> 258 <211> 47 <212> PRT <213> Homno Sapiens <400> 258 Ile Ser Asn Ala Arg Giu Asn Ile Gin Arg Phe Phe Gly Arg Gly Ala 1 5 10 Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly 25 Lys Asp Pro Asn His Phe Arg Pro Ala Giy Leu Pro Glu Lys Tyr 64 WO 01/21188 WO 0121188PCTIUS99121770 Ser 1 Asp Asp Asn 1 Ser Pro Ala 1 Leu Asn Arg 1 Ala His C-lu 1 <210> <211> <212> <213> <400> Asn Ala Ser Leu Pro Asn <210> <211> <212> <213> <400> Ala Arg Len Ala Asn His <210> <211> <212> <213> <400> Arg Glu Ala Asp His Phe <210> <211> <212> <213> <400> Glu Asn Asp Gin Phe Arg <210> <211> <212> <213> <400> Asn Ile 259 46
PRT
Homo Sapiens 259 Arg Giu Asn Ile 5 Ala Asp Gin Ala His Phe Arg Pro 260
PRT
Homo Sapiens 260 Giu Asn Ile Gln 5 Asp Gln Ala Ala Phe Arg Pro Ala 261 44
PRT
Homo Sapiens 261 Asn Ile Gin Arg 5 Gin Ala Ala Asn Arg Pro Ala Gly 262 43
PRT
Homo Sapiens 262 Ile Gin Arg Phe 5 Ala Ala Asn Glu Pro Ala Gly Leu Gin Arg Phe Phe Gly 10 Ala Asn Glu Trp Gly 25 Ala Gly Leu Pro Giu 40 Arg Phe Phe Gly Arg 10 Asn Giu Trp Gly Arg 25 Gly Leu Pro Gin Lys 40 Arg Gly Ala Gin Arg Ser Gly Lys Lys Tyr Gly Ala Glu Asp Ser Gly Lys Asp Tyr Phe Phe Giy Arg Gly Ala Giu Asp Ser 10 Gin Trp Gly Arg Ser Gly Lys Asp Pro 25 Len Pro Glu Lys Tyr Phe Gly Arg Gly Ala Gin Asp Ser Leu 10 Trp Gly Arg Ser Gly Lys Asp Pro Asn 25 Pro Gin Lys Tyr 263 42
PRT
Homo Sapiens 263 Gin Arg Phe Phe Gly Arg Gly Ala Giu Asp Ser Leu Ala 5 10 WO 01/21188 Asp Gin Ala Phe Arg Pro <210> <211> <212> <213> <400> Asn Ile Gin 2.
Gin Ala Ala Arg Pro Ala <210> <211> <212> <213> <400> Ile Gin Arg 21 Ala Ala Asn Pro Ala Gly <210> <211> <212> <213> <400> Gin Arg Phe 1 Ala Asn Giu Ala Gly Leu <210> <211> <212> <213> <400> Arg Phe Phe 1 Asn Glu Trp Gly Leu Pro <210> <211> <212> <213> PCTIUS99/2 1770 Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His 25 Ala Gly Leu Pro Glu Lys Tyr 264 41
PRT
Homo Sapiens 264 Arg Phe Phe Gly 5 Asn Giu Trp Gly Gly Leu Pro Giu 265
PRT
Homo Sapiens 265 Phe Phe Gly Arg 5 Glu Trp Gly Arg Leu Pro Glu Lys 266 39
PRT
Homo Sapiens 266 Phe Gly Arg Gly 5 Trp Gly Arg Ser Pro Giu Lys Tyr Arg Gly Ala Glu Asp Ser Leu Ala Asp 10 Arg Ser Gly Lys Asp Pro Asn His Phe 25 Lys Tyr Gly Ala Giu Asp Ser Leu Ala Asp GIn 10 Ser Gly Lys Asp Pro Asn His Phe Arg 25 T yr Ala Giu Asp Ser Leu Ala Asp Gin Ala 10 Gly Lys Asp Pro Asn His Phe Arg Pro 25 267 38
PRT
Homno Sapiens 267 Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala 5 10 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala 25 Giu Lys Tyr 268 37
PRT
Homo Sapiens WO 01/21188 PCT/US99/21770 <400> 268 Phe Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn 1 5 10 Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly 25 Leu Pro Glu Lys Tyr <210> 269 <211> 36 <212> PRT <213> Homo Sapiens <400> 269 Phe Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu 1 5 10 Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu 25 Pro Glu Lys Tyr <210> 270 <211> <212> PRT <213> Homo Sapiens <400> 270 Gly Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp 1 5 10 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 25 Glu Lys Tyr <210> 271 <211> 34 <212> PRT <213> Homo Sapiens <400> 271 Arg Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly 1 5 10 Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu 25 Lys Tyr <210> 272 <211> 33 <212> PRT <213> Homo Sapiens <400> 272 Gly Ala Glu Asp Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg 1 5 10 Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys 25 Tyr <210> 273 <211> 32 WO 01/21188 <2 12> <213> <400> Ala Glu Asp 1 Gly Lys Asp <210> <211> <212> <213> <400> Glu Asp Ser 1 Lys Asp Pro <210> <211> <212> <213> <400> Asp Ser Leu 1 Asp Pro Asn <210> <211> <212> <213> <400> Ser Leu Ala 1 Pro Asn His <210> <211> <212> <213> <400> Leu Ala Asp 1 Asn His Phe <210> <211> <212> <213> <400> Ala Asp Gin 1 His Phe Arg PCT/US99/2 1770
PRT
Homo Sapiens 273 Ser Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg Ser 5 10 Pro Asn-His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 25 274 31
PRT
Homo Sapiens 274 Leu Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly 5 10 Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 25 275
PRT
Homo Sapiens 275 Ala Asp Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys 5 10 His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 25 276 29
PRT
Homo Sapiens 276 Asp Gin Ala Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp 5 10 Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 277 28
PRT
Homo Sapiens 277 Gin Ala Ala Asn Glu TrD Gly Arg Ser Gly Lys Asp Pro 5 10 Arg Pro Ala Gly Leu Pro Glu Lys Tyr 278 27
PRT
Homo Sapiens 278 Ala Ala Asn Glu Trp Gly Arq Ser Gly Lys Asp Pro Asn 5 10 Pro Ala Gly Leu Pro Glu Lys Tyr 68 WO 01/21188 WO 0121188PCTIUS99I2 1770 <210> <211> <212> <213> <400> Asp Gin Ala 1 Phe Arg Pro <210> <211> <212> <213> <400> Gin Ala Ala 1 Arg Pro Ala <210> <211> <212> <213> <400> Ala Ala Asn 1 Pro Ala Gly <210> <211> <212> <213> <400> Ala Asn Glu 1 Ala Gly Leu <210> <211> <212> <213> <400> Asn Glu Trp Gly Leu Pro <210> <211> <212> <213> 279 26
PRT
Homo Sapiens 279 Ala Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His 5 10 Ala Gly Leu Pro Glu Lys Tyr 280
PRT
Homo Sapiens 280 Asn Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe 5 10 Gly Leu Pro Glu Lys Tyr 281 24
PRT
Homo Sapiens 281 Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg 5 10 Leu Pro Glu Lys Tyr 282 23
PRT
Homo Sapiens 282 Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro 5 10 Pro Glu Lys Tyr 283 22
PRT
Homo Sapiens 283 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala 10 Glu Lys Tyr 284 21
PRT
Homo Sapiens WO 01/21188 PCT/US99/21770 <400> 284 Glu Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly 1 5 10 Leu Pro Glu Lys Tyr <210> 285 <211> <212> PRT <213> Homo Sapiens <400> 285 Trp Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu 1 5 10 Pro Glu Lys Tyr <210> 286 <211> 19 <212> PRT <213> Homo Sapiens <400> 286 Gly Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro 1 5 10 Glu Lys Tyr <210> 287 <211> 18 <212> PRT <213> Homo Sapiens <400> 287 Arg Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu 1 5 10 Lys Tyr <210> 288 <211> 17 <212> PRT <213> Homo Sapiens <400> 288 Ser Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys 1 5 10 Tyr <210> 289 <211> 16 <212> PRT <213> Homo Sapiens <400> 289 Gly Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 10 <210> 290 <211> <212> PRT WO 01/21188 PCTfUS99/21770 <213> Homo Sapiens <400> 290 Lys Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 10 <210> 291 <211> 14 (212> PRT <213> Homo Sapiens <400> 291 Asp Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 <210> 292 <211> 13 <212> PRT <213> Homo Sapiens <400> 292 Pro Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 <210> 293 <211> 12 <212> PRT <213> Homo Sapiens <400> 293 Asn His Phe Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 1 <210> 294 <211> 11 <212> PRT <213> Homo Sapiens <400> 294 His Phe Arq Pro Ala Gly Leu Pro Glu Lys Tyr 1 5 <210> 295 <211> <212> PRT <213> Homo Sapiens <400> 295 Phe Arg Pro Ala Gly Lcu Pro Glu Lys Tyr 1 5 <210> 296 <211> 9 <212> PRT <213> Homno Sapiens <400> 296 Arg Pro Ala Gly Leu Pro Glu Lys Tyr 1 <210> 297 <211> 8 WO 01/21188 <212> PRT <213> Homo Sapiens (400> 297 Pro Ala Gly Leu Pro Glu Lys Tyr 1 <210> 298 <211> 7 <212> PRT <213> Homo Sapiens <400> 298 Ala Gly Leu Pro Glu Lys Tyr 1 (210> 299 <211> 6 <212> PRT <213> Homo Sapiens <400> 299 Gly Leu Pro Glu Lys Tyr 1 <210> 300 (211> <212> PRT <213> Homo Sapiens <400> 300 Leu Pro Glu Lys Tyr 1 <210> 301 <211> 4 <212> PRT <213> Homo Sapiens <400> 301 Pro Glu Lys Tyr 1 PCTIUS99/2 1770
Claims (8)
1. A method of identifying a compound that modulates binding of SAA (serum amyloid A) to a FPRL1 (formyl peptide receptor-like 1) receptor comprising: providing a test compound that is a peptide, peptidomimetic, or chemical; contacting a cell that expresses a FPRL1 receptor with the test compound in the presence of SAA; and measuring binding of SAA to said FRPL1 receptor, so that a compound that modulates binding of SAA to said FRPL1 receptor is identified.
2. The method of Claim 1 wherein said test compound is a peptide.
3. The method of Claim 1 wherein said test compound is a peptidomimetic. 0
4. The method of Claim 1 wherein said test compound is a chemical. o
5. The method of Claim 2 wherein said peptide is a carboxy truncation, amino truncation, or internal truncation of SAA having a sequence selected from the group consisting of SEQ ID NOs: 2-301.
6. The method of Claim 2 wherein said peptide is SAA. o* .15
7. The method of any one of Claims 1 to 6 wherein said cell is a genetically engineered host eo cell that contains a sequence encoding a FRPL1 receptor so that a FPRL1 receptor is stably expressed by the host cell.
8. The method of any one of Claims 1 to 7 wherein the SAA is labeled. S9. The method of any one of Claims 1 to 8 wherein a compound that inhibits binding of SAA to said FRPL1 receptor is identified. The method of any one of Claims 1 to 9 further comprising incorporating the compound that is identified into a composition. The Government of the United States of America, as represented by the Secretary, Department of Health and Human Services By their patent attomeys CULLEN CO. Date: 28 November 2005
Applications Claiming Priority (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| PCT/US1999/021770 WO2001021188A1 (en) | 1999-09-22 | 1999-09-22 | Utilization of fprl1 as a functional receptor by serum amyloid a (saa) |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| AU6395199A AU6395199A (en) | 2001-04-24 |
| AU784063B2 true AU784063B2 (en) | 2006-01-19 |
Family
ID=22273649
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AU63951/99A Ceased AU784063B2 (en) | 1999-09-22 | 1999-09-22 | Utilization of FPRL1 as a functional receptor by serum amyloid A (SAA) |
Country Status (3)
| Country | Link |
|---|---|
| AU (1) | AU784063B2 (en) |
| CA (1) | CA2383172A1 (en) |
| WO (1) | WO2001021188A1 (en) |
Families Citing this family (17)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| AU4988900A (en) | 1999-05-05 | 2000-11-17 | Government Of The United States Of America, As Represented By The Secretary Of The Department Of Health And Human Services, The | T20/dp178 and t21/dp107 are activators of human phagocyte formyl peptide receptors |
| CA2412513A1 (en) * | 2000-06-22 | 2001-12-27 | San Diego State University Foundation | Modulators of recombination and methods for producing and using the same |
| US20020160533A1 (en) | 2001-04-30 | 2002-10-31 | George Jackowski | Biopolymer marker indicative of disease state having a molecular of weight of 1525 daltons |
| US20040052928A1 (en) | 2002-09-06 | 2004-03-18 | Ehud Gazit | Peptides and methods using same for diagnosing and treating amyloid-associated diseases |
| AU2004203461B2 (en) * | 2002-01-31 | 2009-09-03 | Tel Aviv University Future Technology Development L.P. | Peptides Antibodies Directed Thereagainst and Methods Using Same for Diagnosing and Treating Amyloid-Associated Diseases |
| US20070021345A1 (en) | 2003-06-30 | 2007-01-25 | Ehud Gazit | Peptides antibodies directed thereagainst and methods using same for diagnosing and treating amyloid-associated diseases |
| WO2003082314A2 (en) * | 2002-04-03 | 2003-10-09 | Bayer Healthcare Ag | Diagnostics and therapeutics for diseases associated with n-formyl peptide receptor like 1 (fprl1) |
| WO2004027427A1 (en) * | 2002-09-19 | 2004-04-01 | Astrazeneca Ab | Assays for fprl-1 ligands |
| US7291590B2 (en) * | 2003-06-12 | 2007-11-06 | Queen's University At Kingston | Compositions and methods for treating atherosclerosis |
| US7700544B2 (en) | 2003-06-12 | 2010-04-20 | Queens's University At Kingston | Compositions and methods for treating atherosclerosis |
| EP1663199B1 (en) | 2003-09-25 | 2013-04-03 | Tel Aviv University Future Technology Development L.P. | Compositions and methods using same for treating amyloid-associated diseases |
| CA2645245A1 (en) | 2006-03-31 | 2007-10-11 | Queen's University At Kingston | Compositions and methods for treating atherosclerosis |
| EP2200628A2 (en) | 2007-07-15 | 2010-06-30 | Yitzchak Hillman | Disease treatment via antimicrobial peptides or their inhibitors |
| TW201225972A (en) | 2010-11-15 | 2012-07-01 | Univ Ramot | Dipeptide analogs for treating conditions associated with amyloid fibril formation |
| US9458232B2 (en) * | 2013-07-16 | 2016-10-04 | The Feinstein Institute For Medical Research | SAA domain-specific antibodies and peptide antagonists and use thereof to treat inflammatory diseases |
| CN109957003B (en) * | 2019-04-15 | 2022-04-19 | 南京立顶医疗科技有限公司 | Stable SAA mutant and application thereof in disease detection |
| CN110746499A (en) * | 2019-11-28 | 2020-02-04 | 宁波赛珀生物技术有限公司 | Serum amyloid protein A mutant and application and preparation method thereof |
-
1999
- 1999-09-22 AU AU63951/99A patent/AU784063B2/en not_active Ceased
- 1999-09-22 WO PCT/US1999/021770 patent/WO2001021188A1/en not_active Ceased
- 1999-09-22 CA CA002383172A patent/CA2383172A1/en not_active Abandoned
Also Published As
| Publication number | Publication date |
|---|---|
| WO2001021188A1 (en) | 2001-03-29 |
| AU6395199A (en) | 2001-04-24 |
| CA2383172A1 (en) | 2001-03-29 |
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